Lag0031229 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031229
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ABC transporter C family member 13 isoform X3
Location	chr11: 6016959 .. 6018832 (+)
RNA-Seq Expression	Lag0031229
Synteny	Lag0031229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATTGTAATGGATAAAGGAATGGTAAAGTGGGTTGGAAATCCAACCAACTTGTCGGGTTCATCTTATGTTGCATTTTCCGGCCTGTCAAACGAACTTGATACAACCCTACATATTCAAGAACAAGACTGCCAAATAATTGAGAGAACTGAAACTCACAAACATTTCCTTGATGAGAAAGAGGACATGAATGCTCCAAATGGAGTAATTGAGACTGTTGACGACGAGATGCGGAATGAGGGCAGAGTTCAACTCAGTGTATACAAGTAAGCATTAATGGCATATTCATCTTCAGTGAACAGTGAGCAATTCAAAAAGTGGCTTTTTTTGGATAATTTTTTTATTAATTAATTCATTATTGTCAGTACTTTTTGAAATATTTGGTGGCAACAATTCCAGGAACTATGCAGCATTTTGTGGTTGGTTCATTACAATCATTATATGCATTTCTGCATTTTTAATGCAAGCTTCACGCAACGGAAATGATCTTTGGCTTTCTTTTTGGGTCGACACAACGGGAAGAAGTCAGATGGATAGTTCAACAACCTTTTACCTAGTAATCAACATTTATATTTCTTTGTTATTGCTAGTATATGACCTTTTGCAGCTGGCATAGATTATATATTTGTTTTGATCAAATAACTATTGTAATGTAGAGTAGTTGTTAATGACTGAAATTTAAGAAATCTTGAGCTATAGTTCCTCCCATGATTGATATAAGTCTATCTGATTAGCTACTTGGGCTTTCACTTTACTGAAACAATCAGCACAGGGAATTATTTAGTTTTAGGGACTGTTACAACCTTGCTAATGGTTGGTTCTAATAACTGTTAGTTTGTTAAGGTTGATTACTATTTAGCAGAACCCAATACAAAACTTTCTAATGGTAATCAACGAAAAACCAACCTAGCCCTCCTGTACACAAACCCTTCCAACAAGCTGGATTACAAAGGAAAGGACACCAACTAAAATAATTATCAGAATGATGATATTTGGAATGTCACACAATAAAGCAGCTGTAGCTAGTTGAAGGCCAATTGAAGTTGAGAAACTTGGACAGCATCCTTTCCAAATACTTTTGTAACGGAGTTGGCATCGGTAACAATTGATGGAAAAATCAATCATAATCAACCAGTAACCATTTTCTACGTTTTTAGACGAACTATCTTCTTGTAAGAGAGCACGGAAGTTTGCTGACACCATTTTCCATTTTTTAAAATTTTTTATTAAGGTGTGCCTATGCATATCTTTTTCTTTCTGATGCCTTCAAAATTTTGCAGGTTACTCTTTGCATCTTTTGCATCATAAATTCATTCTTTACTTTGCTGAGAGCATTCTCATTTGCATTTGGTGGCTTACAAGCTGCAGTTAAGGTGCATGATACATTATTGAATAAGCTTATTCATGCACCTATTCAGTTTTTTTATCAAACACCAGGTGGACGAATCCTGAACAGGTTAGTTGATGTAAAAATCTTCAAGATTCTTATTGAATTCAAGTTGTAAAATTAGGGGAGACCCATTTGGCCATATTTATTCACAAACTAACCAACTAAGCCACAAAACTAACTAACCATAACCAACTAATTAGTTGGCTGGAGATTTACAGAGAATTAAATGGCTGGAAAAAAACCCTCAGCAACTAAAATAACCCCACAGTAAATATACGCCTACATCAAATCCACCCCTACAAAATGAAACTCGTCCTCAAGTTTTAAGTAGCCAAGAGGAACTCATCTGGTGCAAAATAAGGAAAGATATCTGAGACATTGAAAGTATTACTAATGCACATGGTAGGTGGAAGATCAACACGGTAGGCATTGGGACCTATCTTGTCCAAATAGGGAAAGGACGAATCTTTTTATTGGTTAG

mRNA sequence

ATGGTTATTGTAATGGATAAAGGAATGGTAAAGTGGGTTGGAAATCCAACCAACTTGTCGGGTTCATCTTATGTTGCATTTTCCGGCCTGTCAAACGAACTTGATACAACCCTACATATTCAAGAACAAGACTGCCAAATAATTGAGAGAACTGAAACTCACAAACATTTCCTTGATGAGAAAGAGGACATGAATGCTCCAAATGGAGTAATTGAGACTGTTGACGACGAGATGCGGAATGAGGGCAGAGTTCAACTCAGTGTATACAAGAACTATGCAGCATTTTGTGGTTGGTTCATTACAATCATTATATGCATTTCTGCATTTTTAATGCAAGCTTCACGCAACGGAAATGATCTTTGGCTTTCTTTTTGGGTCGACACAACGGGAAGAAGTCAGATGGATAGTTCAACAACCTTTTACCTAGTTACTCTTTGCATCTTTTGCATCATAAATTCATTCTTTACTTTGCTGAGAGCATTCTCATTTGCATTTGGTGGCTTACAAGCTGCAGTTAAGGTGGAAGATCAACACGGTAGGCATTGGGACCTATCTTGTCCAAATAGGGAAAGGACGAATCTTTTTATTGGTTAG

Coding sequence (CDS)

ATGGTTATTGTAATGGATAAAGGAATGGTAAAGTGGGTTGGAAATCCAACCAACTTGTCGGGTTCATCTTATGTTGCATTTTCCGGCCTGTCAAACGAACTTGATACAACCCTACATATTCAAGAACAAGACTGCCAAATAATTGAGAGAACTGAAACTCACAAACATTTCCTTGATGAGAAAGAGGACATGAATGCTCCAAATGGAGTAATTGAGACTGTTGACGACGAGATGCGGAATGAGGGCAGAGTTCAACTCAGTGTATACAAGAACTATGCAGCATTTTGTGGTTGGTTCATTACAATCATTATATGCATTTCTGCATTTTTAATGCAAGCTTCACGCAACGGAAATGATCTTTGGCTTTCTTTTTGGGTCGACACAACGGGAAGAAGTCAGATGGATAGTTCAACAACCTTTTACCTAGTTACTCTTTGCATCTTTTGCATCATAAATTCATTCTTTACTTTGCTGAGAGCATTCTCATTTGCATTTGGTGGCTTACAAGCTGCAGTTAAGGTGGAAGATCAACACGGTAGGCATTGGGACCTATCTTGTCCAAATAGGGAAAGGACGAATCTTTTTATTGGTTAG

Protein sequence

MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDEKEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDLWLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVEDQHGRHWDLSCPNRERTNLFIG

Homology

[Close]

BLAST of Lag0031229 vs. NCBI nr
Match: XP_038903957.1 (ABC transporter C family member 13 isoform X4 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMD+G VKW+GNP NLSGSSYVAF+ LSNELDT   IQ Q CQ+IERTETHK+FLDE
Sbjct: 620 MVIVMDRGKVKWIGNPANLSGSSYVAFT-LSNELDTAKCIQGQGCQVIERTETHKYFLDE 679

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           KED NAPNGV ETVDDEMR EGRVQLSVYKNYAAFCGWFI IIICISAFLMQASRNGNDL
Sbjct: 680 KEDTNAPNGVTETVDDEMRKEGRVQLSVYKNYAAFCGWFIAIIICISAFLMQASRNGNDL 739

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVDTTGRSQMDSSTT YLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 740 WLSFWVDTTGRSQMDSSTTSYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 794

[Close]

BLAST of Lag0031229 vs. NCBI nr
Match: XP_038903953.1 (ABC transporter C family member 13 isoform X1 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMD+G VKW+GNP NLSGSSYVAF+ LSNELDT   IQ Q CQ+IERTETHK+FLDE
Sbjct: 810 MVIVMDRGKVKWIGNPANLSGSSYVAFT-LSNELDTAKCIQGQGCQVIERTETHKYFLDE 869

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           KED NAPNGV ETVDDEMR EGRVQLSVYKNYAAFCGWFI IIICISAFLMQASRNGNDL
Sbjct: 870 KEDTNAPNGVTETVDDEMRKEGRVQLSVYKNYAAFCGWFIAIIICISAFLMQASRNGNDL 929

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVDTTGRSQMDSSTT YLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 930 WLSFWVDTTGRSQMDSSTTSYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 984

[Close]

BLAST of Lag0031229 vs. NCBI nr
Match: XP_038903958.1 (ABC transporter C family member 13 isoform X5 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMD+G VKW+GNP NLSGSSYVAF+ LSNELDT   IQ Q CQ+IERTETHK+FLDE
Sbjct: 619 MVIVMDRGKVKWIGNPANLSGSSYVAFT-LSNELDTAKCIQGQGCQVIERTETHKYFLDE 678

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           KED NAPNGV ETVDDEMR EGRVQLSVYKNYAAFCGWFI IIICISAFLMQASRNGNDL
Sbjct: 679 KEDTNAPNGVTETVDDEMRKEGRVQLSVYKNYAAFCGWFIAIIICISAFLMQASRNGNDL 738

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVDTTGRSQMDSSTT YLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 739 WLSFWVDTTGRSQMDSSTTSYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 793

[Close]

BLAST of Lag0031229 vs. NCBI nr
Match: XP_038903954.1 (ABC transporter C family member 13 isoform X2 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMD+G VKW+GNP NLSGSSYVAF+ LSNELDT   IQ Q CQ+IERTETHK+FLDE
Sbjct: 809 MVIVMDRGKVKWIGNPANLSGSSYVAFT-LSNELDTAKCIQGQGCQVIERTETHKYFLDE 868

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           KED NAPNGV ETVDDEMR EGRVQLSVYKNYAAFCGWFI IIICISAFLMQASRNGNDL
Sbjct: 869 KEDTNAPNGVTETVDDEMRKEGRVQLSVYKNYAAFCGWFIAIIICISAFLMQASRNGNDL 928

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVDTTGRSQMDSSTT YLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 929 WLSFWVDTTGRSQMDSSTTSYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 983

[Close]

BLAST of Lag0031229 vs. NCBI nr
Match: XP_038903956.1 (ABC transporter C family member 13 isoform X3 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMD+G VKW+GNP NLSGSSYVAF+ LSNELDT   IQ Q CQ+IERTETHK+FLDE
Sbjct: 755 MVIVMDRGKVKWIGNPANLSGSSYVAFT-LSNELDTAKCIQGQGCQVIERTETHKYFLDE 814

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           KED NAPNGV ETVDDEMR EGRVQLSVYKNYAAFCGWFI IIICISAFLMQASRNGNDL
Sbjct: 815 KEDTNAPNGVTETVDDEMRKEGRVQLSVYKNYAAFCGWFIAIIICISAFLMQASRNGNDL 874

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVDTTGRSQMDSSTT YLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 875 WLSFWVDTTGRSQMDSSTTSYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 929

[Close]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot
Match: Q9SKX0 (ABC transporter C family member 13 OS=Arabidopsis thaliana OX=3702 GN=ABCC13 PE=2 SV=3)

HSP 1 Score: 166.4 bits (420), Expect = 3.3e-40
Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           M++VMDKG V W G+ T++  S    FS L+NE D           + +R ET    L  
Sbjct: 760 MIVVMDKGKVNWSGSVTDMPKSISPTFS-LTNEFD-----MSSPNHLTKRKET----LSI 819

Query: 61  KED--MNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGN 120
           KED          + V  E R EGRV++ VY+NYA F GWFITI+I +SA LMQ SRNGN
Sbjct: 820 KEDGVDEISEAAADIVKLEERKEGRVEMMVYRNYAVFSGWFITIVILVSAVLMQGSRNGN 879

Query: 121 DLWLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           DLWLS+WVD TG+     ST+FYL+ LCIFCIINS  TL+RAFSFAFGGL+AAV V +
Sbjct: 880 DLWLSYWVDKTGKGVSHYSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHN 927

[Close]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot
Match: Q5T3U5 (ATP-binding cassette sub-family C member 10 OS=Homo sapiens OX=9606 GN=ABCC10 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.0e-06
Identity = 50/176 (28.41%), Postives = 67/176 (38.07%), Query Frame = 0


Query: 41  QEQD---CQIIERTETHKHFLDEKEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCG 100
           QE D    Q ++  E  K  L+E++  +        + +E + EG V L VY+ Y    G
Sbjct: 827 QESDSATAQSVQNPEKTKEGLEEEQSTSG-----RLLQEESKKEGAVALHVYQAYWKAVG 886

Query: 101 WFITIIICISAFLMQASRNGNDLWLSFWVD-------------TTGRSQM---------- 160
             + + I  S  LMQA+RN  D WLS W+              +T  + M          
Sbjct: 887 QGLALAILFSLLLMQATRNAADWWLSHWISQLKAENSSQEAQPSTSPASMGLFSPQLLLF 946

Query: 161 -------------------DSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAA 172
                               S   FYL        +NS  TLLRA  FA G LQAA
Sbjct: 947 SPGNLYIPVFPLPKAAPNGSSDIRFYLTVYATIAGVNSLCTLLRAVLFAAGTLQAA 997

[Close]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot
Match: Q8R4P9 (ATP-binding cassette sub-family C member 10 OS=Mus musculus OX=10090 GN=Abcc10 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 55/219 (25.11%), Postives = 82/219 (37.44%), Query Frame = 0


Query: 1    MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
            +V++M+ G +   G P+ +        +  + +       Q      +ERT       +E
Sbjct: 794  VVLLMEAGQLVRTGPPSEILPLVQAVPTAWAEKEQVATSGQSPSVCDLERTTE-----EE 853

Query: 61   KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
             E   +  G +  V +E ++EG V L VY+ Y    G  +   I +S  LMQA+RNG D 
Sbjct: 854  LEVEQSTCGCL--VQEESKSEGAVALHVYRAYWRAMGSGLAAAILVSLLLMQATRNGADW 913

Query: 121  WLSFWVD--TTGR-------------------------------------------SQMD 175
            WL+ W+     GR                                           S   
Sbjct: 914  WLAHWLSQLKAGRNGSREDPASCSPGSTALFSPRLLLFSPGNLYTPLLSTPLHKAASNGT 973

[Close]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot
Match: O15438 (ATP-binding cassette sub-family C member 3 OS=Homo sapiens OX=9606 GN=ABCC3 PE=1 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 29/90 (32.22%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 82   GRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDLWLSFWVDTTGRSQMDSSTTFY 141
            G V+LSV+ +YA   G   T+ IC+      A+  G ++WLS W +        ++T+  
Sbjct: 952  GTVELSVFWDYAKAVGLCTTLAICLLYVGQSAAAIGANVWLSAWTNDAMADSRQNNTSLR 1011

Query: 142  LVTLCIFCIINSFFTLLRAFSFAFGGLQAA 172
            L       I+  F  +L A + A GG+QAA
Sbjct: 1012 LGVYAALGILQGFLVMLAAMAMAAGGIQAA 1041

[Close]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot
Match: O88563 (ATP-binding cassette sub-family C member 3 OS=Rattus norvegicus OX=10116 GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 29/98 (29.59%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 74   VDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDLWLSFWVDTTGRSQ 133
            + +E+   G V+LSVY +YA   G   T+ IC+      A   G ++WLS W +      
Sbjct: 939  IKEEIAETGNVKLSVYWDYAKSVGLCTTLFICLLYAGQNAVAIGANVWLSAWTNDVEEHG 998

Query: 134  MDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAA 172
              ++T+  L       I+     +L AF+   G +QAA
Sbjct: 999  QQNNTSVRLGVYATLGILQGLLVMLSAFTMVVGAIQAA 1036

[Close]

BLAST of Lag0031229 vs. ExPASy TrEMBL
Match: A0A6J1GCL2 (ABC transporter C family member 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452749 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMDKG +KWVGNP+NLSGSSYVAFS  SNELDTT+ IQ Q+ QIIERT+THKH +DE
Sbjct: 808 MVIVMDKGKLKWVGNPSNLSGSSYVAFS-KSNELDTTVRIQGQNGQIIERTDTHKHLVDE 867

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           K DMN PNGV ET+DDEMR EGRVQ SVYKNYAAFCGWFITIIICISAFLMQASRNGNDL
Sbjct: 868 KNDMNTPNGVTETIDDEMRKEGRVQFSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 927

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVD  GRSQMDS TTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 928 WLSFWVDAAGRSQMDSPTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 982

[Close]

BLAST of Lag0031229 vs. ExPASy TrEMBL
Match: A0A6J1GBY5 (ABC transporter C family member 13 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111452749 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMDKG +KWVGNP+NLSGSSYVAFS  SNELDTT+ IQ Q+ QIIERT+THKH +DE
Sbjct: 577 MVIVMDKGKLKWVGNPSNLSGSSYVAFS-KSNELDTTVRIQGQNGQIIERTDTHKHLVDE 636

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           K DMN PNGV ET+DDEMR EGRVQ SVYKNYAAFCGWFITIIICISAFLMQASRNGNDL
Sbjct: 637 KNDMNTPNGVTETIDDEMRKEGRVQFSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 696

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVD  GRSQMDS TTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 697 WLSFWVDAAGRSQMDSPTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 751

[Close]

BLAST of Lag0031229 vs. ExPASy TrEMBL
Match: A0A6J1GCN8 (ABC transporter C family member 13 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111452749 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMDKG +KWVGNP+NLSGSSYVAFS  SNELDTT+ IQ Q+ QIIERT+THKH +DE
Sbjct: 809 MVIVMDKGKLKWVGNPSNLSGSSYVAFS-KSNELDTTVRIQGQNGQIIERTDTHKHLVDE 868

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           K DMN PNGV ET+DDEMR EGRVQ SVYKNYAAFCGWFITIIICISAFLMQASRNGNDL
Sbjct: 869 KNDMNTPNGVTETIDDEMRKEGRVQFSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 928

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVD  GRSQMDS TTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 929 WLSFWVDAAGRSQMDSPTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 983

[Close]

BLAST of Lag0031229 vs. ExPASy TrEMBL
Match: A0A6J1GBV7 (ABC transporter C family member 13 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111452749 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMDKG +KWVGNP+NLSGSSYVAFS  SNELDTT+ IQ Q+ QIIERT+THKH +DE
Sbjct: 599 MVIVMDKGKLKWVGNPSNLSGSSYVAFS-KSNELDTTVRIQGQNGQIIERTDTHKHLVDE 658

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           K DMN PNGV ET+DDEMR EGRVQ SVYKNYAAFCGWFITIIICISAFLMQASRNGNDL
Sbjct: 659 KNDMNTPNGVTETIDDEMRKEGRVQFSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 718

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVD  GRSQMDS TTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 719 WLSFWVDAAGRSQMDSPTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 773

[Close]

BLAST of Lag0031229 vs. ExPASy TrEMBL
Match: A0A6J1GBV6 (ABC transporter C family member 13 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452749 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           MVIVMDKG +KWVGNP+NLSGSSYVAFS  SNELDTT+ IQ Q+ QIIERT+THKH +DE
Sbjct: 600 MVIVMDKGKLKWVGNPSNLSGSSYVAFS-KSNELDTTVRIQGQNGQIIERTDTHKHLVDE 659

Query: 61  KEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 120
           K DMN PNGV ET+DDEMR EGRVQ SVYKNYAAFCGWFITIIICISAFLMQASRNGNDL
Sbjct: 660 KNDMNTPNGVTETIDDEMRKEGRVQFSVYKNYAAFCGWFITIIICISAFLMQASRNGNDL 719

Query: 121 WLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           WLSFWVD  GRSQMDS TTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKV D
Sbjct: 720 WLSFWVDAAGRSQMDSPTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVHD 774

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BLAST of Lag0031229 vs. TAIR 10
Match: AT2G07680.1 (multidrug resistance-associated protein 11 )

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNLSGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFLDE 60
           M++VMDKG V W G+ T++  S    FS L+NE D           + +R ET    L  
Sbjct: 754 MIVVMDKGKVNWSGSVTDMPKSISPTFS-LTNEFD-----MSSPNHLTKRKET----LSI 813

Query: 61  KED--MNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFCGWFITIIICISAFLMQASRNGN 120
           KED          + V  E R EGRV++ VY+NYA F GWFITI+I +SA LMQ SRNGN
Sbjct: 814 KEDGVDEISEAAADIVKLEERKEGRVEMMVYRNYAVFSGWFITIVILVSAVLMQGSRNGN 873

Query: 121 DLWLSFWVDTTGRSQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAAVKVED 177
           DLWLS+WVD TG+     ST+FYL+ LCIFCIINS  TL+RAFSFAFGGL+AAV V +
Sbjct: 874 DLWLSYWVDKTGKGVSHYSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHN 921

[Close]

BLAST of Lag0031229 vs. TAIR 10
Match: AT3G13090.1 (multidrug resistance-associated protein 8 )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 45/187 (24.06%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNL--SGSSYVAFSGLSNELDTTL------HIQEQDCQIIERTE 60
           +++VM  G +   G    +  SG+ ++   G   E   T+      +  E+     E   
Sbjct: 793 LILVMKDGKITQAGKYHEILDSGTDFMELVGAHTEALATIDSCETGYASEKSTTDKENEV 852

Query: 61  THKHFLDEKEDMNAPNGVIETVDDEMRNEGRVQLSVYKNYAAFC-GWFITIIICISAFLM 120
            H     E    N P+G  + V +E R +G+V  +VYK Y A   G  +  +I +   L 
Sbjct: 853 LHHKEKQENGSDNKPSG--QLVQEEEREKGKVGFTVYKKYMALAYGGAVIPLILVVQVLF 912

Query: 121 QASRNGNDLWLSFWVDTTGRSQMDSSTTFYLVTL-CIFCIINSFFTLLRAFSFAFGGLQA 178
           Q    G++ W++ WV    +      + F L+ +  +  + +SF  L+RA   A  G + 
Sbjct: 913 QLLSIGSNYWMT-WVTPVSKDVEPPVSGFTLILVYVLLAVASSFCILIRALLVAMTGFKM 972

[Close]

BLAST of Lag0031229 vs. TAIR 10
Match: AT3G13100.1 (multidrug resistance-associated protein 7 )

HSP 1 Score: 45.1 bits (105), Expect = 7.8e-05
Identity = 43/186 (23.12%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 1   MVIVMDKGMVKWVGNPTNL--SGSSYVAFSGLSNELDTTLHIQEQDCQIIERTETHKHFL 60
           +++VM  G +   G    +  SG+ ++   G   +    +   E+     + T + +  +
Sbjct: 816 LILVMKDGRITQAGKYNEILESGTDFMELVGAHTDALAAVDSYEKGSASAQSTTSKESKV 875

Query: 61  ---DEKEDMNAPNGVIETVDDEMRNEGRVQLSVYKNY--AAFCGWFITIIICISAFLMQA 120
              +EK++ + P+   + V +E R +G+V  +VY+ Y   A+ G  + II+ +   L Q 
Sbjct: 876 SNDEEKQEEDLPSPKGQLVQEEEREKGKVGFTVYQKYMKLAYGGALVPIILVVQ-ILFQV 935

Query: 121 SRNGNDLWLSFWVDTTGR--SQMDSSTTFYLVTLCIFCIINSFFTLLRAFSFAFGGLQAA 178
              G++ W++ WV    +    + S +T  LV +      +SF  L+RA   A  G + A
Sbjct: 936 LNIGSNYWMA-WVTPVSKDVKPLVSGSTLILVYV-FLATASSFCILVRAMLSAMTGFKIA 995

The following BLAST results are available for this feature:

BLAST of Lag0031229 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903957.1	1.7e-81	89.20	ABC transporter C family member 13 isoform X4 [Benincasa hispida]	[more]
XP_038903953.1	1.7e-81	89.20	ABC transporter C family member 13 isoform X1 [Benincasa hispida]	[more]
XP_038903958.1	1.7e-81	89.20	ABC transporter C family member 13 isoform X5 [Benincasa hispida]	[more]
XP_038903954.1	1.7e-81	89.20	ABC transporter C family member 13 isoform X2 [Benincasa hispida]	[more]
XP_038903956.1	1.7e-81	89.20	ABC transporter C family member 13 isoform X3 [Benincasa hispida]	[more]

BLAST of Lag0031229 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKX0	3.3e-40	52.81	ABC transporter C family member 13 OS=Arabidopsis thaliana OX=3702 GN=ABCC13 PE=...	[more]
Q5T3U5	9.0e-06	28.41	ATP-binding cassette sub-family C member 10 OS=Homo sapiens OX=9606 GN=ABCC10 PE...	[more]
Q8R4P9	1.2e-05	25.11	ATP-binding cassette sub-family C member 10 OS=Mus musculus OX=10090 GN=Abcc10 P...	[more]
O15438	2.0e-05	32.22	ATP-binding cassette sub-family C member 3 OS=Homo sapiens OX=9606 GN=ABCC3 PE=1...	[more]
O88563	3.4e-05	29.59	ATP-binding cassette sub-family C member 3 OS=Rattus norvegicus OX=10116 GN=Abcc...	[more]

BLAST of Lag0031229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCL2	4.4e-80	86.93	ABC transporter C family member 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GBY5	4.4e-80	86.93	ABC transporter C family member 13 isoform X5 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GCN8	4.4e-80	86.93	ABC transporter C family member 13 isoform X6 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GBV7	4.4e-80	86.93	ABC transporter C family member 13 isoform X4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GBV6	4.4e-80	86.93	ABC transporter C family member 13 isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Lag0031229 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07680.1	2.3e-41	52.81	multidrug resistance-associated protein 11	[more]
AT3G13090.1	1.6e-05	24.06	multidrug resistance-associated protein 8	[more]
AT3G13100.1	7.8e-05	23.12	multidrug resistance-associated protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 25..180 e-value: 8.8E-9 score: 36.1
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 3..174
None	No IPR available	PANTHER	PTHR24223:SF330	MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7	coord: 3..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031229.1	Lag0031229.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding