Lag0031198 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031198
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr11: 5707352 .. 5709201 (+)
RNA-Seq Expression	Lag0031198
Synteny	Lag0031198

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATCAGGGGCAACATCAAGTTTGCTTAGAGGGATCCGATAGTGATCAGCAAGGAGGGCTCGCCAACATGGAATGCCAACAAGCATCGGAAGAAACATACACAGAAGAACTAAATCATCAGATTGAAAAACTGAGTTTAGCCGAACAAGAAGGAAGAAGAGTAGTTGCCATTGATGATGAAGATATAGAAGAAACAGACAAAGACCTCTCTGGAGCGGTGGCCTGTAAAATCCTCTCGACTAAACTTATATTATGGGAAGTTTTTTCTGACATTATGCCAAGGATTTGGGCTATGGAAGGTCGAGTCATAGTTGAGAAAGAGGGAAGAAACGTCTTCCTTTGCAAGTTTAAATATAAACGAGACAAGGTTAGAGTAATGAAGGGTTGTCCCTGGATCTATGATGATTCACTCATACTGATGGAAGAACCAAAAGGGAAGTGCTGCATAAGCTCTTTAGAGTTCAGGTATGCTTCCTTCTGGATTCAATTTTATAAGTTACCTCGGGTATGTTTTGTAGGAAATATGCAGAGGCATTGGGTAATTCAATAGGGACCTTTGAAGATGTAGAAACAGATGCAAAAGGAAACTTCAGTGGGGAAAAGCTAAGGATTCGAATTAAAATTGATATAAACGAGCCTTTAAAGCGAGGAACAAATATCAGGATTGGCTCAGGAGCTCCGAACACTTGGTTCCCAGTCACTTATGAAAAGCTCCCCGACTTTTGCTATCATTGCGGGAAAGTTGGCCATGTCATTCATGAGTGTGATCAAGTTGAGGGATGGGGCACTGGTGAGAATGTTTATGGGACTGATCTGAGAGCAACACAAGCGAGCAAAGGCTTCTATAAAGGAAATCTTTCAGAAAGATGGGCTAACAGAGGTTACCAGGTTAGTGGCAGAGGGAGGGGCAGAGGTGATAACAGTCGAAAATCGTATCAACGGAGGAATAATGAAGGCATGGGTACTACCAAGGAAGCAGTTAATCAGGGTAATAGAGCTAGAGGTGATACCCAGAACAAAGTTGATGAGGATGCTGAGAAGAAAGGTGAAAGATCGAGCTTCACAAAACAGAGAAGCCAAAAAGGAAACAATAACATGGAAACGGATGTGGGGAAGGTCAAAATGGTGCTAGAGCATAGGGTTGCAAACGGAGCTGCCAACGATCTAACCATGGGAGATAAGGATGACGAGAAAGGTTGCAGTACGTCCAACACGCATCACATTTTCGACCACCCAGTTACGGCGGCGAAGCCGCCGGAGAAACATGTGGCCGACCAAAAAGAGCCGTTAACAAAAAACAGCGAAGCACTAATACCAAGGGAGAGTGATAATCTCAAGGCAATCAGAAGCAAAAAGGATGTGGGTAGAAAAGACAAGCCGAAGGGTCAGCTGTCACAGGCTATGGAAAAAGAAGCTGAAGGTACACCCAAAGTGTTAGAAAGATGTTGTTTGCTGGAAAAGGAAGGGTCAGCTCTGGGACCCACCACATCAAGGAAAAATGGCCAAAAACAAGACTCAAATAGCTGTGAAATTTCACCAGAAATGCTAAGGTCAAGTCAGATGCCAGAAATAAAAGGAAAAGAGGACGAAAATAGTCATCAAGGGACCAAGTCAGGAATGGTAACGAAAGAATTAAAAGGGTTGAAAGCTTGGAAAAGAAGAGCTCGGAAGGAGGATGTTCATGCTGATGATAATGCAATGGAATGGACTAATTTTTTCAGTAAGAAGCATGATAGACAGGAAGATGAAGACAACAAGATAACAAAGAAAGTGTGCAAAGGTTACTCCGAATTTGCAGGAGGGATATCGGCGGAGGCTGTGGAACAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGGAAAATCAGGGGCAACATCAAGTTTGCTTAGAGGGATCCGATAGTGATCAGCAAGGAGGGCTCGCCAACATGGAATGCCAACAAGCATCGGAAGAAACATACACAGAAGAACTAAATCATCAGATTGAAAAACTGAGTTTAGCCGAACAAGAAGGAAGAAGAGTAGTTGCCATTGATGATGAAGATATAGAAGAAACAGACAAAGACCTCTCTGGAGCGGTGGCCTGTAAAATCCTCTCGACTAAACTTATATTATGGGAAGTTTTTTCTGACATTATGCCAAGGATTTGGGCTATGGAAGGTCGAGTCATAGTTGAGAAAGAGGGAAGAAACGTCTTCCTTTGCAAGTTTAAATATAAACGAGACAAGGTTAGAGTAATGAAGGGTTGTCCCTGGATCTATGATGATTCACTCATACTGATGGAAGAACCAAAAGGGAAGTGCTGCATAAGCTCTTTAGAGTTCAGGAAATATGCAGAGGCATTGGGTAATTCAATAGGGACCTTTGAAGATGTAGAAACAGATGCAAAAGGAAACTTCAGTGGGGAAAAGCTAAGGATTCGAATTAAAATTGATATAAACGAGCCTTTAAAGCGAGGAACAAATATCAGGATTGGCTCAGGAGCTCCGAACACTTGGTTCCCAGTCACTTATGAAAAGCTCCCCGACTTTTGCTATCATTGCGGGAAAGTTGGCCATGTCATTCATGAGTGTGATCAAGTTGAGGGATGGGGCACTGGTGAGAATGTTTATGGGACTGATCTGAGAGCAACACAAGCGAGCAAAGGCTTCTATAAAGGAAATCTTTCAGAAAGATGGGCTAACAGAGGTTACCAGGTTAGTGGCAGAGGGAGGGGCAGAGGTGATAACAGTCGAAAATCGTATCAACGGAGGAATAATGAAGGCATGGGTACTACCAAGGAAGCAGTTAATCAGGGTAATAGAGCTAGAGGTGATACCCAGAACAAAGTTGATGAGGATGCTGAGAAGAAAGGTGAAAGATCGAGCTTCACAAAACAGAGAAGCCAAAAAGGAAACAATAACATGGAAACGGATGTGGGGAAGGTCAAAATGGTGCTAGAGCATAGGGTTGCAAACGGAGCTGCCAACGATCTAACCATGGGAGATAAGGATGACGAGAAAGGTTGCAGTACGTCCAACACGCATCACATTTTCGACCACCCAGTTACGGCGGCGAAGCCGCCGGAGAAACATGTGGCCGACCAAAAAGAGCCGTTAACAAAAAACAGCGAAGCACTAATACCAAGGGAGAGTGATAATCTCAAGGCAATCAGAAGCAAAAAGGATGTGGGTAGAAAAGACAAGCCGAAGGGTCAGCTGTCACAGGCTATGGAAAAAGAAGCTGAAGGTACACCCAAAGTGTTAGAAAGATGTTGTTTGCTGGAAAAGGAAGGGTCAGCTCTGGGACCCACCACATCAAGGAAAAATGGCCAAAAACAAGACTCAAATAGCTGTGAAATTTCACCAGAAATGCTAAGGTCAAGTCAGATGCCAGAAATAAAAGGAAAAGAGGACGAAAATAGTCATCAAGGGACCAAGTCAGGAATGGTAACGAAAGAATTAAAAGGGTTGAAAGCTTGGAAAAGAAGAGCTCGGAAGGAGGATGTTCATGCTGATGATAATGCAATGGAATGGACTAATTTTTTCAGTAAGAAGCATGATAGACAGGAAGATGAAGACAACAAGATAACAAAGAAAGTGTGCAAAGGTTACTCCGAATTTGCAGGAGGGATATCGGCGGAGGCTGTGGAACAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGGAAAATCAGGGGCAACATCAAGTTTGCTTAGAGGGATCCGATAGTGATCAGCAAGGAGGGCTCGCCAACATGGAATGCCAACAAGCATCGGAAGAAACATACACAGAAGAACTAAATCATCAGATTGAAAAACTGAGTTTAGCCGAACAAGAAGGAAGAAGAGTAGTTGCCATTGATGATGAAGATATAGAAGAAACAGACAAAGACCTCTCTGGAGCGGTGGCCTGTAAAATCCTCTCGACTAAACTTATATTATGGGAAGTTTTTTCTGACATTATGCCAAGGATTTGGGCTATGGAAGGTCGAGTCATAGTTGAGAAAGAGGGAAGAAACGTCTTCCTTTGCAAGTTTAAATATAAACGAGACAAGGTTAGAGTAATGAAGGGTTGTCCCTGGATCTATGATGATTCACTCATACTGATGGAAGAACCAAAAGGGAAGTGCTGCATAAGCTCTTTAGAGTTCAGGAAATATGCAGAGGCATTGGGTAATTCAATAGGGACCTTTGAAGATGTAGAAACAGATGCAAAAGGAAACTTCAGTGGGGAAAAGCTAAGGATTCGAATTAAAATTGATATAAACGAGCCTTTAAAGCGAGGAACAAATATCAGGATTGGCTCAGGAGCTCCGAACACTTGGTTCCCAGTCACTTATGAAAAGCTCCCCGACTTTTGCTATCATTGCGGGAAAGTTGGCCATGTCATTCATGAGTGTGATCAAGTTGAGGGATGGGGCACTGGTGAGAATGTTTATGGGACTGATCTGAGAGCAACACAAGCGAGCAAAGGCTTCTATAAAGGAAATCTTTCAGAAAGATGGGCTAACAGAGGTTACCAGGTTAGTGGCAGAGGGAGGGGCAGAGGTGATAACAGTCGAAAATCGTATCAACGGAGGAATAATGAAGGCATGGGTACTACCAAGGAAGCAGTTAATCAGGGTAATAGAGCTAGAGGTGATACCCAGAACAAAGTTGATGAGGATGCTGAGAAGAAAGGTGAAAGATCGAGCTTCACAAAACAGAGAAGCCAAAAAGGAAACAATAACATGGAAACGGATGTGGGGAAGGTCAAAATGGTGCTAGAGCATAGGGTTGCAAACGGAGCTGCCAACGATCTAACCATGGGAGATAAGGATGACGAGAAAGGTTGCAGTACGTCCAACACGCATCACATTTTCGACCACCCAGTTACGGCGGCGAAGCCGCCGGAGAAACATGTGGCCGACCAAAAAGAGCCGTTAACAAAAAACAGCGAAGCACTAATACCAAGGGAGAGTGATAATCTCAAGGCAATCAGAAGCAAAAAGGATGTGGGTAGAAAAGACAAGCCGAAGGGTCAGCTGTCACAGGCTATGGAAAAAGAAGCTGAAGGTACACCCAAAGTGTTAGAAAGATGTTGTTTGCTGGAAAAGGAAGGGTCAGCTCTGGGACCCACCACATCAAGGAAAAATGGCCAAAAACAAGACTCAAATAGCTGTGAAATTTCACCAGAAATGCTAAGGTCAAGTCAGATGCCAGAAATAAAAGGAAAAGAGGACGAAAATAGTCATCAAGGGACCAAGTCAGGAATGGTAACGAAAGAATTAAAAGGGTTGAAAGCTTGGAAAAGAAGAGCTCGGAAGGAGGATGTTCATGCTGATGATAATGCAATGGAATGGACTAATTTTTTCAGTAAGAAGCATGATAGACAGGAAGATGAAGACAACAAGATAACAAAGAAAGTGTGCAAAGGTTACTCCGAATTTGCAGGAGGGATATCGGCGGAGGCTGTGGAACAGCCCCGCCGGACGCCATGA

Protein sequence

MENQGQHQVCLEGSDSDQQGGLANMECQQASEETYTEELNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEFRKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKRGTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGENVYGTDLRATQASKGFYKGNLSERWANRGYQVSGRGRGRGDNSRKSYQRRNNEGMGTTKEAVNQGNRARGDTQNKVDEDAEKKGERSSFTKQRSQKGNNNMETDVGKVKMVLEHRVANGAANDLTMGDKDDEKGCSTSNTHHIFDHPVTAAKPPEKHVADQKEPLTKNSEALIPRESDNLKAIRSKKDVGRKDKPKGQLSQAMEKEAEGTPKVLERCCLLEKEGSALGPTTSRKNGQKQDSNSCEISPEMLRSSQMPEIKGKEDENSHQGTKSGMVTKELKGLKAWKRRARKEDVHADDNAMEWTNFFSKKHDRQEDEDNKITKKVCKGYSEFAGGISAEAVEQPRRTP

Homology

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BLAST of Lag0031198 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 4.8e-31
Identity = 102/327 (31.19%), Postives = 154/327 (47.09%), Query Frame = 0


Query: 37  EELNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPR 96
           E L    +K  L  +E    + +D + ++  ++ L+ ++  K+L+ ++I  +V S ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 97  IWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF 156
            W +E ++ VE  G+N+FL  F  + D  RVMK  PW +D +LI++++P     IS LEF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 157 RK------------------YAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPL 216
            +                   A  LGN+IG F DV+ + KG   G  LRIR+ IDI +PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 217 KRGTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECD------QVEGWGTGENVY 276
           +RG  I I       W P+ YE+LPDFCY CG +GH  H+CD      Q +   T E  Y
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE--Y 243

Query: 277 GTDLRATQASKGFYKGNLSERWANRGYQVSGRGRGRGDNSRKSYQRRNNEGMGTTKEAVN 336
           G  LR   +  G  KG              G+   R D+   S       G+  TK+ ++
Sbjct: 244 GPWLRFVGSKAGAQKGR------------KGKSPAREDSCGSSSMNSKERGVEETKQQLS 303

Query: 337 QGNRARGDTQNKVDEDAEKKGERSSFT 340
           +     G       E     G R+S T
Sbjct: 304 EQTNQDGFQSQAAAEQTGDAGGRASAT 316

[Close]

BLAST of Lag0031198 vs. NCBI nr
Match: KAF5458622.1 (hypothetical protein F2P56_022639, partial [Juglans regia])

HSP 1 Score: 137.9 bits (346), Expect = 2.9e-28
Identity = 100/322 (31.06%), Postives = 164/322 (50.93%), Query Frame = 0


Query: 39  LNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIW 98
           L+   E L L E+E + VV + +E++  ++          +++ K        + M R+W
Sbjct: 5   LSKLCEGLKLTEEEQQEVV-VSNEEVIISEAKSKHCFMMMVITDKEANRGALRNTMARVW 64

Query: 99  AMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEFR- 158
            +EG+ I ++ GRN FL + K + DK R+M+G PW +D +LI +++ +G      ++F+ 
Sbjct: 65  QIEGKAIFKEVGRNKFLVELKERADKKRIMQGRPWSFDKNLICLQDCEGHESRKEMQFQH 124

Query: 159 -----------------KYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKR 218
                                 LG S+G    V+TD  G   G  LR+R+ ID+ +PL R
Sbjct: 125 EPFWVQCHDLPFAGMNANTGLNLGKSMGEVLMVDTDDSGVCWGSFLRLRVMIDLTKPLAR 184

Query: 219 GTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVE-GWGTGENV---YGTDL 278
           G  + +G+     W P  YE+LP+FCYHCGK+ HV   CDQ++ G  + E     YG  L
Sbjct: 185 GRVLTLGNA--KYWIPFKYERLPNFCYHCGKIKHVTGMCDQLDKGKASLEGFNQQYGAWL 244

Query: 279 RATQASKGFYKGNLSERWANRGYQVSGRGRGRGD----NSRKSYQRRNNEGMGTTKEAVN 334
           R T     F +G+ S +  ++G ++SG  + +GD      +++ + R    M  T+E   
Sbjct: 245 R-TSPKSIFAEGSQSRKETSQG-RMSGHDQRKGDREIQQEKEAPEGREESVMAGTEEVQE 304

[Close]

BLAST of Lag0031198 vs. NCBI nr
Match: XP_024038344.1 (uncharacterized protein LOC112097374 [Citrus clementina])

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-26
Identity = 83/262 (31.68%), Postives = 135/262 (51.53%), Query Frame = 0


Query: 36  TEELNHQIEKLSLAEQE-GRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIM 95
           TEEL  + + +++ E++ G+  +A++ +  E   + L+G +  KIL ++ +  E     +
Sbjct: 3   TEELIQKCKAITIREEDKGKLSLAVNMK--EHRGQVLAGCLMGKILLSRGVNREGLKIAL 62

Query: 96  PRIWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSL 155
            ++W     V +E  G N+F+ KF  + DK RV+ G  W +D +LI++ EPK    +S  
Sbjct: 63  QQVWQTFKEVKIESLGNNIFMFKFAEEADKRRVLSGGAWHFDRALIVLTEPKRIGEVSKQ 122

Query: 156 EF------------------RKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINE 215
           +F                  R++ + LG  IG  E+VETD  G+  GE  R+RI I+I +
Sbjct: 123 DFSHVHFWVQICNIPIACMEREFLQELGGMIGKVEEVETDENGDCFGEYARLRISINITQ 182

Query: 216 PLKRGTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGENVYGTDL 275
           PLK+   ++   G  +   PV YE+LPDFC+ CG +G+   EC Q +G    E  +G  +
Sbjct: 183 PLKKILFLK-QEGESDIPMPVVYERLPDFCFSCGIIGYQFKECTQYQGQPKEEFSFGVWM 242

Query: 276 RATQASKGFYKGNLSERWANRG 279
           +A        K    ERW N G
Sbjct: 243 KALMIGGRSKKHISKERWQNEG 261

[Close]

BLAST of Lag0031198 vs. NCBI nr
Match: TXG48431.1 (hypothetical protein EZV62_027725 [Acer yangbiense])

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-26
Identity = 88/283 (31.10%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 46  LSLAEQEG--RRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIWAMEGR 105
           +SL ++EG  RR+  +     E   K L+  +A KILS + I  E F  ++ RIW ++G 
Sbjct: 1   MSLTKREGPVRRLQGVLK---EAGAKKLALCLAGKILSRESINREAFRSLIARIWKVQGG 60

Query: 106 VIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF------- 165
           V +E    N++   F+   D+ RV  G PW +D +LI++EEP+GK  I+SL F       
Sbjct: 61  VEIEVISTNIYAFPFQSFDDRKRVFMGGPWSFDGALIVLEEPEGKGAINSLLFNSVDFWV 120

Query: 166 -----------RKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKRGTNIR 225
                      +   + LG+ IG   +V+     +  G+ +R+R+ +++++PL+R   + 
Sbjct: 121 HITNVPMIYMTKDIGKFLGSIIGEVREVDVGPSSDCLGKFMRVRVAVEVDKPLRRFLRVD 180

Query: 226 IGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGEN---VYGTDLRAT--- 285
           +      T  P+ YE+LP FC+ CG VGH++HEC      G  E    VYG  LRAT   
Sbjct: 181 VLGDGEETVMPIQYERLPSFCFLCGLVGHLVHECTSYGEDGLREGSGMVYGAWLRATAPL 240

Query: 286 -QASKGFYKGNLSERWANRGYQVSGRGRGRGDNSRKSYQRRNN 302
            Q  +G + G++  R      Q    G   G+ +++S+ +  N
Sbjct: 241 VQYGRGNWGGHVDMRNQGAFRQDPNVGHHTGEFNQRSWVKSGN 280

[Close]

BLAST of Lag0031198 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 3.5e-26
Identity = 72/234 (30.77%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 44  EKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIWAMEGR 103
           +   L  +E +  V ID   +E T K L  ++ CK+LS + I   V  + +   W ++ +
Sbjct: 11  KNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWKLDCK 70

Query: 104 VI-VEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEFRK---- 163
              V+  G N+FL  F    D+ R+++  PW +D +LI+++ P        ++FR     
Sbjct: 71  AFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLW 130

Query: 164 --------------YAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKRGTNI 223
                          A  LGN+IG FEDVE++A     G  LR+R++ D+ +PL RG  +
Sbjct: 131 VHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKL 190

Query: 224 RIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGENV-YGTDLR 258
            +       W P+ YE+LPDF YHCG++ H++ +C         +N+ YG  LR
Sbjct: 191 NLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0031198 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-31
Identity = 102/327 (31.19%), Postives = 154/327 (47.09%), Query Frame = 0


Query: 37  EELNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPR 96
           E L    +K  L  +E    + +D + ++  ++ L+ ++  K+L+ ++I  +V S ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 97  IWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF 156
            W +E ++ VE  G+N+FL  F  + D  RVMK  PW +D +LI++++P     IS LEF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 157 RK------------------YAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPL 216
            +                   A  LGN+IG F DV+ + KG   G  LRIR+ IDI +PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 217 KRGTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECD------QVEGWGTGENVY 276
           +RG  I I       W P+ YE+LPDFCY CG +GH  H+CD      Q +   T E  Y
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE--Y 243

Query: 277 GTDLRATQASKGFYKGNLSERWANRGYQVSGRGRGRGDNSRKSYQRRNNEGMGTTKEAVN 336
           G  LR   +  G  KG              G+   R D+   S       G+  TK+ ++
Sbjct: 244 GPWLRFVGSKAGAQKGR------------KGKSPAREDSCGSSSMNSKERGVEETKQQLS 303

Query: 337 QGNRARGDTQNKVDEDAEKKGERSSFT 340
           +     G       E     G R+S T
Sbjct: 304 EQTNQDGFQSQAAAEQTGDAGGRASAT 316

[Close]

BLAST of Lag0031198 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.1e-28
Identity = 87/257 (33.85%), Postives = 128/257 (49.81%), Query Frame = 0


Query: 37  EELNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPR 96
           EEL  +   + L+++EG RV   +   I   +K L+G +  K+L T+ +  E     M R
Sbjct: 4   EELIKRCRAIRLSDEEGGRVSFKNRMKI-NGEKILAGCLVGKVLHTREVSIEGLKMAMQR 63

Query: 97  IWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF 156
           +W     V +EK G NVF+ KF  + DK  +M G PW +D +LI + EP G   I   +F
Sbjct: 64  VWRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKKQDF 123

Query: 157 ------------------RKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPL 216
                             +  A  LG  IG  E+VETDA G   G+ LR+RI +DI +PL
Sbjct: 124 SHVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDITKPL 183

Query: 217 KRGTNI-RIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGENVYGTDLR 275
           K+   + +    A +    V YE+LPDFC+ CG++GH   EC   +     E  YG  L+
Sbjct: 184 KKIIELEQEEEDADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQSKDELAYGPWLK 243

[Close]

BLAST of Lag0031198 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.7e-27
Identity = 88/283 (31.10%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 46  LSLAEQEG--RRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIWAMEGR 105
           +SL ++EG  RR+  +     E   K L+  +A KILS + I  E F  ++ RIW ++G 
Sbjct: 1   MSLTKREGPVRRLQGVLK---EAGAKKLALCLAGKILSRESINREAFRSLIARIWKVQGG 60

Query: 106 VIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF------- 165
           V +E    N++   F+   D+ RV  G PW +D +LI++EEP+GK  I+SL F       
Sbjct: 61  VEIEVISTNIYAFPFQSFDDRKRVFMGGPWSFDGALIVLEEPEGKGAINSLLFNSVDFWV 120

Query: 166 -----------RKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKRGTNIR 225
                      +   + LG+ IG   +V+     +  G+ +R+R+ +++++PL+R   + 
Sbjct: 121 HITNVPMIYMTKDIGKFLGSIIGEVREVDVGPSSDCLGKFMRVRVAVEVDKPLRRFLRVD 180

Query: 226 IGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGEN---VYGTDLRAT--- 285
           +      T  P+ YE+LP FC+ CG VGH++HEC      G  E    VYG  LRAT   
Sbjct: 181 VLGDGEETVMPIQYERLPSFCFLCGLVGHLVHECTSYGEDGLREGSGMVYGAWLRATAPL 240

Query: 286 -QASKGFYKGNLSERWANRGYQVSGRGRGRGDNSRKSYQRRNN 302
            Q  +G + G++  R      Q    G   G+ +++S+ +  N
Sbjct: 241 VQYGRGNWGGHVDMRNQGAFRQDPNVGHHTGEFNQRSWVKSGN 280

[Close]

BLAST of Lag0031198 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-26
Identity = 72/234 (30.77%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 44  EKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPRIWAMEGR 103
           +   L  +E +  V ID   +E T K L  ++ CK+LS + I   V  + +   W ++ +
Sbjct: 11  KNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWKLDCK 70

Query: 104 VI-VEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEFRK---- 163
              V+  G N+FL  F    D+ R+++  PW +D +LI+++ P        ++FR     
Sbjct: 71  AFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLW 130

Query: 164 --------------YAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPLKRGTNI 223
                          A  LGN+IG FEDVE++A     G  LR+R++ D+ +PL RG  +
Sbjct: 131 VHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKL 190

Query: 224 RIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTGENV-YGTDLR 258
            +       W P+ YE+LPDF YHCG++ H++ +C         +N+ YG  LR
Sbjct: 191 NLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0031198 vs. ExPASy TrEMBL
Match: A0A5C7IW83 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001918 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-26
Identity = 88/281 (31.32%), Postives = 144/281 (51.25%), Query Frame = 0


Query: 37  EELNHQIEKLSLAEQEGRRVVAIDDEDIEETDKDLSGAVACKILSTKLILWEVFSDIMPR 96
           +E+    E LS+AE++G  V+   + +IE+  KD+   +  K+L+ K +  E F  ++ +
Sbjct: 4   KEITDLYENLSIAEEDG-VVLETSETEIEDGAKDVDCCLVGKVLTGKKVNREAFRSLIEQ 63

Query: 97  IWAMEGRVIVEKEGRNVFLCKFKYKRDKVRVMKGCPWIYDDSLILMEEPKGKCCISSLEF 156
           IW+  G+V VE    N+F+  F  + D+ RV +  PW +  SLI++E+PKG    S L F
Sbjct: 64  IWSPFGQVEVEVVADNIFMFYFIKQEDRNRVWQRGPWHFGKSLIVLEKPKGTGNYSQLGF 123

Query: 157 ------------------RKYAEALGNSIGTFEDVETDAKGNFSGEKLRIRIKIDINEPL 216
                             R+ A+ +   IG   ++  D+K  + G+ +R+++ IDI++PL
Sbjct: 124 NKAAFWVQIHDTPIICMNRRMAKWMAEQIGEVVEIPADSKECW-GKFMRVKVCIDISKPL 183

Query: 217 KRGTNIRIGSGAPNTWFPVTYEKLPDFCYHCGKVGHVIHECDQVEGWGTG----ENVYGT 276
           +R   +++G     T   + YE+LP+FCY CG+VGH I EC  V+            YG 
Sbjct: 184 RRWLRLKLGKTEEITTVSLKYERLPEFCYACGRVGHGILECLDVDARKQALECTPTKYGA 243

Query: 277 DLRATQASKGFYKGNLSERW---ANRGYQVSGRGRGRGDNS 293
            L+A    K  Y  N S+ +   ++RG    G   G GD S
Sbjct: 244 WLKALTGEK-LYSRNNSQGYGSSSDRGRSTEGSREGEGDGS 281

The following BLAST results are available for this feature:

BLAST of Lag0031198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	4.8e-31	31.19	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
KAF5458622.1	2.9e-28	31.06	hypothetical protein F2P56_022639, partial [Juglans regia]	[more]
XP_024038344.1	1.2e-26	31.68	uncharacterized protein LOC112097374 [Citrus clementina]	[more]
TXG48431.1	1.6e-26	31.10	hypothetical protein EZV62_027725 [Acer yangbiense]	[more]
XP_022132681.1	3.5e-26	30.77	uncharacterized protein LOC111005481 [Momordica charantia]	[more]

BLAST of Lag0031198 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0031198 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	2.3e-31	31.19	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A1S8AC25	4.1e-28	33.85	CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1	[more]
A0A5C7GUN1	7.7e-27	31.10	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1	[more]
A0A6J1BSZ1	1.7e-26	30.77	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5C7IW83	2.2e-26	31.32	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00191...	[more]

BLAST of Lag0031198 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..499
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..459
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 45..331
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 192..240 e-value: 5.9E-12 score: 45.1
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 64..144 e-value: 2.4E-7 score: 30.4
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 45..331
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 226..241 score: 9.603271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031198.1	Lag0031198.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding