Lag0031161 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031161
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	nucleolin 1 isoform X1
Location	chr11: 5431304 .. 5441149 (-)
RNA-Seq Expression	Lag0031161
Synteny	Lag0031161

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTAGCGCTCCGTTGCTTTTCTGCGTTTAATTTCCAGCCTCTTCCCCCGTTAATCGCTTCTCTCCGTCGAGTTTCACAGGATTCGCTGGACCCGGCTAGGGTTCATGGAAGCTGCAATTCCGGAGCTCAATATTTGAGGGTTTGAATATACCAATTGAACTCCGGTGTTAGTGTTGAGAGTGAGCGTTCGCTGTTCTGGATTGTGGAGCTCCGTGAAAAAACGCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGTACGGACTAGCCTAGCCTTTTAACATTCATGTGCCTGAGAGCTTTTTGCCAAGCAATGAGATTATCGGTTTTTTGACGAGTCTGCCTGGGAGTTTTTAGAAATTCTTTTAGGTTATTCATGTGGAGGCCATTTTCTTCTTCTTAATAGGTTGTTGAGGAATATGTTTGGTTGAAGAAATGGAAATGTAGCAATCGCCGGTTGTTATATATTTGCTAATGCAGAATGAAAGAAAAAAAAAAAATAGTTCTGATTCTTTATCTTTGAATAATGAAGTGCCTGGGGTGAATTTTCTCCTATTTACTAAGAAATTCGTGAAGCATAGATGGTTGATATAATAAGATGAATTCAAATTCAATGCCATATATTATTCTTCGTCCAAAGCAGACTGCATCTTCTAATGTGATTTGCAATAGCCTGTTTAAGAATTTGGTTAGCCGTCATCCTGTTTAACTGTCGCCCCTCTTTGAAAGAATCTCTCTGAGCTAGGTGAACTTGTTACCGTGTTTATTCATTCGGTTTGATGGTTGGCTGTTTCCATTTTTCATTGATAAACAATAAGTACATCGATTTAATGAAATGTAAGAAAAGAAGAATCTAATTAGCATGAAAGAATTACTTGAAGTTACAGAATAGGCTATAAGTATTACTCCCAAATGTGATGATTAAATGAACGTTCTCCTAAAATAACTTGGAAGAGTTGGCAATAATCTTGTAGAAGCAAGAGGTTGAGATTAAGCTAATTGGACGGAAATCTATTGGAGTCTTTGCATTAGGTTTCTTTGTTGAGGGATGCATTAAGAATATCATTCTGAAAAAAGATCTTGGAATACTTGTAATGTCTTCCTTGAGGGTGTTTCAAGAGTTCTAAGTGGTGAATCCATCACGTTTTTGAGCTTTTTTACTCCCCAAATTTGAGATACCTTGAATAATTTTGTTTACCCTAAAATTAGCCTCTATCTAAAGCAATCATTGGGGACTCTAAGGTTGACATCCAATCTAAACTGGTTGGCATAAATTTTTCCACCTCTTTCTTTGAGTATGGATCTGGGAGAAAGCAAGAAATTCTTTTTCAATGTGTGTGGAAAGGTCTAGTGTTATGATCTCCCCTCTTGATACATCTTCTCCTGCGAGATATGTGGATTTGTATCTTCACATTCAAATAATTATCTTTCCAATTAGATCTTTGAGTTGGGATCTGAGATTTATTATAGAAGATCATTTGGTTGCATCAAGTAGGGAAAAGTATTGCTAGTGGTCTAGAGCTTTGGGGTCAACAAGAATTTCAACTTTTCTGAAGGTTCCATCTTTTCAGTGAGCGTTTTGTCTTCTTTAATCTGCAAATAGAAACCATACGTTAGCCAACCCTCGAGATTAAAGTAGAATCCCACCAACTTTTTGAGGTCTTCGAGAAATTGTTGTGCTTGAGCCACATTTACCAGAAGAATCTAGAAGGGTCATTTAACTGTCCGAGGTATGTCTTTCAAGGTGTTTAACTCTAGAATTGGAGATTTAAAGGAGCCAATCATGGGAGACTAGAAATTTGTCAATGAGGGACAAAACAAGCTATCTTGGATCAAGTTAACTTGGCACTGTCACGAGGGATATCAATGAAGGAGAGGTTGTCAAGAACCCCATCAAAGAGCTTCATGCTCTTGGTGGGGCTTTTGGAGGTGAATTTCTCTCTACTCCATTTAGAGATATTGGAGTCTTCCTACTCCATTAGTCATGACAGAGGCACCCGGGATTTTCCAATTTTCTAAAAAAGAAACCTAGATATTGACATCTTGAGAGGGATCATAAATATTAAAGAGCCTAACTCCTAAGAAGAAGAAAAATTTGCAAAAGGAAACTTGATGCTTTAAGAGAAAGGTGGCAGCCATAACAAAGGCACCCAAGATTTTCCAATTCCCTCCAGAAAAAGAAATAATTTGAAATGGACATCTTGAGAGGATCCATAAATATTGAGAAGCCAAAAACAATAGGTTATTCCAGATCCACACTAAAAAAAAAAAAAATCTTTATATGGACATCATGAGTAGGCTAGTGTCTTTAGGAGTTGCTAAGGGTCAGGTAGAGGGTTTGAAGGATCTGCCTTTTCGCGAGAAGGGGAGGTTTTTATGGTTTGCTGGGGTGTGTGCTGTGTTATGGGGTCTTTGGGGAGAGAGGAATAATAGGGTGTTTCGAGGTCTTGAGAGGAGTCCTTCTGATGTTTGGGATCTCACTAGATTCTATGTTTCTCTCTGGGCCTCTGTGTCTAAGGCTTTTTGTAATTACTCTTTAGGTTGTATTATCTTGGATTGGCGACCTTTCCTTTAAAAGGGGGTCTTTTTTTGGGCTGGTTTTTTGTTTCCCTTGTATTATTTCATTTTTTCTCAATTAAAGCTGGTATTTTTATCAAAAAAAAAAAATTGTGAGTAGGTATGATCCTTATCCCTGGGTGTGGGTCGTAGTTTTTGAAGGGTTCTAGTAAAAACCTTTTTTTTATTGAGATTTCTATTGGTTTTCCTTATTTTTTCCCCGTTTTTAAAATGTTCGGTTGAGAAAGGCTCAAAGGTTTACTTTTAGGAGGATTGGTGGGTTGGGGAATCTTCCTTTTGTACTTTATTTCCTCACTTCTATCACCTTTCGATAAGAAGTTCCATTCAGTGACTTATTTTTAGCCTTCTTCAGATCGGATTAATACTTGGGACTGTATTCAAAGACGATCTCCTTTAGTGTTAGGTCTGTAGTGATGCATTCTTTGCTAGAGGCACAAGGAGGGTATTGACCACTTGTTGTGGGGGTGTGAATTTGCTCATGCTTTGTGAGCAAATGCTTGAGTTTGTTCGGATTATGTTTGACTTGAGGCAGGGTTTTGCGGTTTTATGATTGAGGAGATGTTCCTTAATCTCCTAGAGACTTGTTTCTTTGTTGTGTTACGAGGAATTTGGCATGAGAGAAATAATAGAATTTTAAGGAGGTAAGAGATTGTGGGGGAGGTTTAGGGGTAGCTAGGTTTAATGCGTCCTTGGTTTGTTACTCAGCCTTTTTGCGATTATGAGCTTGGTTTGATTCTTTTGGATTGAATCCTTTTCTGTAGTTAGTAGATGGACTCCTTTTGGTGGGCTTGTTTTTGTATGCCCTCGTATATTCTTTCATTTTCCTCATTGAAGACTCAATTTCTTACCCCCAAAAAAGGAATGTTCTTGCAACATACATTCCGGGGTAAGCCACCCGAGCCCTTTTTAATTTTCCAAGTTCTTTCTTTTCTTAGTTGATCGAAGACTTAATGTTTGGAATCTCTCTATCTAGTTCTTTGCTCTTCTTCTTCACACGTTTCTTTTTCTTCAGTGTGGAGGGAATAGGAAAGGTAAGAAGGTGGAGTTTTCAATGGCCCTAAAGCCAAATTGTTGTTGTGAAGAAAGCCATGGGTCATCACTCTATTAGAACAGATTGGGAAGGTCGAGAAGAAACTGCTTCATGTACAAACTTCAACATCGAAGATGTTTTTGGTGGTGGTGGTGGGGGGGGGGGATAAAAGGTTGACAACACAAGTCTGGAAGGGTTGCAATGTCTCCTCTTTCAAATAAGGGTAGAACAAGTTGAGTGGGGGAGGTAGGCAATTGCTAAATGGTGAATGGATGTTTTTTCTCAAAAAAAAGTTGAGAGGATCAGGTATTTCAAAGAGAAGGCCGGTTGCTTTGCTTTCTCATTCAAAAAAAACTTTTCAATATTCCAAGGGATGTATAGTCTCATCAAGTAGGGTACTATTTTTATATTTTCCTTCTGTTAGGTCATGATATGATGGAACCTAGAAGGCTAGAAAAATAAGCATGAATTGCACGTTAGGAGTGTTGATTAAGGACCAATACTTGAGAGGATTCAAAATCAATGGTTGCGACTCTAGATATAACCATGGACTCTAGCGACTTTTCTTCACCAAAGACTTAGTACCATACAAAGGGGCAACATGGACAACATTTTGATCTCAGATAGAGATGTGATTTAACTTTTATGAAAGCTTCCATGAGATCCAATTTCTGAAGTTTTAGTGGCAGAATTGAGAAATCCTCCACACAATGAAAATGCCTACGGAAGAATCAAGATTCCATTTTGTTCCGGGGCACATTTATAATCTTTATCCATTCTTCATATGAAAGGGACGACCAATCTTGGAATGCTCGAGAGAGTCCAGCCTTCTCATTGGGAGAGAAGTCTTAGCTTGTTCCATTCTTTTGCATTTGAGCATGGCCTTATTAACTTGGACATGGTTTGGGCTATTTAGCTTTTGGAGAGTTGTGAGGGTTTGGTTCTTGTTGTTCATAAGAGTTTTCTTCAAATCACACTGGGGACATTCATCGCCGATGTGATTGTAGCTTAATTGGTTAAGGTATATACTCTTAACCAAGAGGTCAAATGTTTGAATTTTCCCCCTCGATGTTGGATTAAAAAAAATGGAGACATTCATCTTGATAAGGAAGATGCCATCTTTAATAGAGTGTTAACCATAACCACTGTGGGTTGACCTAGTGGTGAAGAAGGGCCAGGTAAATGATAAAGGAAGAACTTAGAGGGAATGAGTTTAAGTCATGATGGTCACCTACCTAAAATTTAATATCCGAATAGTCGAGATGCACGTAAGCTGGTCCATACACTCACAGATAAAAAATAAAAAAATAAAACATTAACCATGTTTTAGTAATCTTGCTACCAAGAACTTTTTCAATGTTTTATTCATTTTTTTCTTTGGGAATCTTAGAGGCTTTTACTTGCAGTGTAGTGCACTTTGGGGTGACCTTAAATAGAAAATGTTATTTAAAATAATTGATTTTGATGGGCTCCAGTAGGAGTTAGATATCATTTACTTCAGGTACCCTTGAGGGCTTCATAGGTTTCCGGATTCTGTGAATAGGAAAGTAAGTGGAAAACTAGTTTATATATAATATATCAGAATGCTTGAAAATTTATTATGAGATGCTGGGATTTATTTAAGTGATGTGAAACTGTTTAGCCTTTGAATGTCCTCTTTTTTCTCAAGTGGTAAGGCATGAGAGTGTGGAAACTTTCTTTTATAGAGGGGGTGGAAAAGGAGGAAGCCCGACAATTGTTTAGTAAGCCATCTCAAGAGTGGAGGTTCCAGGTACCTTGAATAGTTTGGAGAGTTGTATTGAAATTCCATTAACTTTTACATTACAATATAGTGGGTTTTATCAATTGGTATCAGATTAATTTGGTTTTGGCCATGGGGTTCGATGTAAATTTATGTGAAGAGTTGTTGTTGACTTTGCCTGAAGAGCTGTTTTTTTATTTAATTCAGCGTTATACTTGTGTATCTTTCATAGGCATGTTTGTGCATTTGCTTAAATTGCCTCCATGTTTCATTTTTTTCATATTCATCATAATGTGGTTTCAAATCTACTTCAATAACTGGGATTTAGAGCCTCTGTTTGAATAGATGAAGTCTTATTAAATTTAATGAATGTTTTTTGGGTAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGTAATTTGATTCTTATCCTTCCTCGTGTTCATATTTGTAACTTGGGTAGTTTCTTGCATTGAGTCATCTTGCAGCCAGTTTGACTAATTTTTTTATAAGCTTCATTTCAACAGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTACTAAATCTTCTGCCAGTGAAGTGCCCAGACCTAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGGTTCGTGATCTGACTTTTCTCTTCTAAATTAGTACCTAGCGACAGTTAATTGGGCTTTAAAATGTGAAAGTTGAATTAGTGAAAAGCAATGGATGGAGTGTTCGTCGAACCATATCTCGTTATTTCTCAGTTTGCAACCCCACAATTGTATTTTTGCTTAAAACTGCACGTTTTTATGTAACTAAAATTTTAAAGTATCTTAATTAAAAAAAAAGTTCTCAATTATGGTGTCTAAAGACCTATCAACTCGTATGAGCGTGTCTTGTTTTCTGATTATGTGTAAACTTTAATTTCTTCTCCTTTCCACTGACATATGGCCTATGTCTGTTTAAATTCAGGGTTTTGTGTTTTTTCTTTAATTAATTACTATTATTATTATTTTTTTGAAATTTTATGTAATGCACAACTATATTGGATTTTGATAATTATTTGATGGGAAGGTAATGATCAGACCTGCAGTTTAACCTTATTCATACAAATGGATAAACCAGAAACATGAAGTATTGTGCTATGTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCTCAAGTATGCTATATTTTGCTCGCTGGACTTCCTAAAATGTATTTTAAGACCACGAAGTATGCTTGATTTATTTTTGTGACTTTTTTCGCAATAATTTGAATGCTCTACTAAACTACCCAAGTTTGATATTTTTAGTCTTTGAAAATAACTTAGTCTAGAATATTGGATAGTTTATTGATGCATTATTCTAATGGGAAACAAATTCTTACGTTTCTTGTTTTACAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTTCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCCACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACGGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATTACACTTTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAGCCTTGAAAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGTGGGCTCTCTTTTCTGGTGTCTGGCTCTACTTTCTAAATGATAATTAGTTTGTACGATTCTTTTGTTTCTCTTTTTCTTTCTATTTGTGAGGTTTCTCATTCCATTTTTTTTCCCGTATTTGCTTATCAACAATCAGTTATCATTCCAGGCTTTTACATTATTATTCTCTAGTGGCTATTTCATTCTAAAAAATTTTCTCATGTTACCTTGTGCAGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTAATAAGTCACTCTTTTGTTGCTTCTGTGAAGAATTGGTGACTGTTCATCACCTCACATTAATTTTCACGTACAGGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTAACTCGTTACAATTGTTTATTGTACCTCAGCTATCTCTTTTCGTTACCTCTACTACAAACGAAAAATTTTCCTACGTCAATTTTTAATAAATTAAGTGATGCGATTGGAGCAGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTAGCTGTTCTATTCTAACATTTTGCTTTGTTGTTTGAAATGAAGGGAATGAGAATTTCTTAAAGAATAGATTTTACCTAACACATTAATCTTTTTCTGCATGTTCAAATTCACAACCAAACACAATTTCAAATTTTGAATTCAAATTGGAAGTTTTTAAAATGGAACCATTTTCAGATATAGTGAAAATAAGGAATATGTATTGGTTTTTCTTTTTGTTCTCTTCAAGTTCTCTAGTAAGCATTGATATCTTAAATGAGCCCAATTATATTTGGTTTGGAAGTAGTGTGGGCCAGTTCACAATCTTACCTATATCCTGTTGTGGGCCGTGTTTACTGATATTTTCTCTTTCTTTTTTAACTGGATTGTTATTCAAGTTTATGGTTGCTTTTCACATAATCAGTGAACTTTTATTGGTGTTTCCATGCCTCACTAATTAGAGAGCGAAAGATCAATAAAGTTCCTGAAAATACTGAAATGGAAATGACAGTAGACATCTAGAAGCAAACAGAAAAAATGTGCAGGCTCCTTTCAGTTTTGGGCTTCTTTATTTTTGTTTAGCCCTCTTTTGTTCTTTCATTTATCTTAATGAAAGGTTGGTTTCCCATAAAGAAAAATGTTCAAGAATCTTGGCTGAATTTGGTTTTAACTTGTTCTTCCACTGGTATTATAATTGTAACATTTCTATCATGATGCCAAAACAACCACAAGACACAACTAGCATGATATGTTTTAGTCAAGTAGCTGCATAATGTAGTCAACGAATAAAGCTGCATGTTTGATTGATTTGTCATTGCAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCTAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCAAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

mRNA sequence

ATGAAATTAGCGCTCCGTTGCTTTTCTGCGTTTAATTTCCAGCCTCTTCCCCCGTTAATCGCTTCTCTCCGTCGAGTTTCACAGGATTCGCTGGACCCGGCTAGGGTTCATGGAAGCTGCAATTCCGGAGCTCAATATTTGAGGATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTACTAAATCTTCTGCCAGTGAAGTGCCCAGACCTAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTTCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCCACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACGGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATTACACTTTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAGCCTTGAAAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCTAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCAAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Coding sequence (CDS)

ATGAAATTAGCGCTCCGTTGCTTTTCTGCGTTTAATTTCCAGCCTCTTCCCCCGTTAATCGCTTCTCTCCGTCGAGTTTCACAGGATTCGCTGGACCCGGCTAGGGTTCATGGAAGCTGCAATTCCGGAGCTCAATATTTGAGGATGGGGAGTGAGGATCGTGTCGATGATCGGACGTTCAAGATTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGATGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGACACGCCTACTAAATCTTCTGCCAGTGAAGTGCCCAGACCTAAATCTCCAGTAGCAGAACCGGATAGAAGAAATGATTCTCGCAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGGCGGCGTAATAGGGAATGGAAAGGAATTTCTAATGAGGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACAAGGCCCTCTAATGCAGCTAAGGAGCCCCTTTCGAAGCGTCTTCGTTCAGTAGTTTCTACTTCCAATAATGACACGACTAATCGTCCCAAGCGGCTTCAATCTGTCGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTCACGGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCCAGTGGCCAACTTGCAGAATATGGAGCAACTGCTGCAGAGGATGATAAATATGGGGATATGAATCATACACAGGATCGACCATACTCAGCCACGTATCTTGAGAGAAGCAATTATAGTGGGAAATATACTCCCGATGAAGCCATGTTTGAAGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTACTATTCAGGGTCACGGAGTATTTGACAATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACCGTGCCATTCAGGGTAGTTGAGAATGCTGATGATGAACGCATTACACTTTATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGGCCCAGGGCAGATTGCTGAACTTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGTACCAGATCTGCTGTGCAAGTAATGGAAAATGGCGAGCCAGTCACGATTGTTAACCAACAGAAAAAGCCTGCAGCAAGCCTTGAAAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCTGCCACTCGTCCTTTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATTGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTATGTGGAGTTCATGAAAAAAGAAGCTGCAGAAAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCTTTCCCTAGGGGCATTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGTGCAAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCCCTGGTAATTCTGTACCCTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Protein sequence

MKLALRCFSAFNFQPLPPLIASLRRVSQDSLDPARVHGSCNSGAQYLRMGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSRNLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEYGATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVTIQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRAVRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVPSSGARSLTYVRTEPKPADK

Homology

[Close]

BLAST of Lag0031161 vs. NCBI nr
Match: XP_038904558.1 (nucleolin 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 606/679 (89.25%), Postives = 642/679 (94.55%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSED VDDRTFK+DF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDPVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ PTKSSA+EVPRPKSPVAEPD  N+S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKSSANEVPRPKSPVAEPDTINNSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESDSERGKSEKLSSRRRNREW+GI+N+ETRV PRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDSERGKSEKLSSRRRNREWRGIANDETRVVPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEP SKRLRSVVSTSN+DTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSTSNSDTTN 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQSVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSRDMDLTESSGQLAEY
Sbjct: 241 CPRRLQSVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G T+ E+DKYGDMNHT+DRPYSATYLER+NYSGKY  +EAMFE ET LASDS SENEDV 
Sbjct: 301 GVTSVENDKYGDMNHTEDRPYSATYLERNNYSGKYALNEAMFEPETELASDSASENEDVN 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           IQGH +F++SWTAESGVR+GGNLRTVPFR VEN+DDER+T YKQKDQPSLVANSSRDIVN
Sbjct: 361 IQGHRIFEDSWTAESGVRRGGNLRTVPFRAVENSDDERVTQYKQKDQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQI EL GQKFLQESELQ TRSAVQVMENGEPVT+VNQ+K+PA 
Sbjct: 421 ISVNVNTWKPPHYQDPGQIPELAGQKFLQESELQRTRSAVQVMENGEPVTLVNQRKRPAP 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKPPLSANGQF  TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 DLQKEFQKPPLSANGQFPGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQP+GSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQ+EGAS  TWPRA
Sbjct: 541 VTDATTGQPRGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQVEGASTATWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSPFPTPRFTRVPF RG+PGGFR R  +KLGARSMQWKRDSQTTTA+ GAS  GNSVP
Sbjct: 601 VRGSPFPTPRFTRVPFMRGVPGGFRARSLMKLGARSMQWKRDSQTTTAETGASPSGNSVP 660

Query: 709 SSGARSLTYVRTEPKPADK 728
           SSGARSLTYVRTE KPA+K
Sbjct: 661 SSGARSLTYVRTESKPANK 679

[Close]

BLAST of Lag0031161 vs. NCBI nr
Match: KAG7036580.1 (Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1167.1 bits (3018), Expect = 0.0e+00
Identity = 610/679 (89.84%), Postives = 637/679 (93.81%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDR+DDRTFK+DFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVP HRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPIHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I GH VFD+SWTAESGVRKGGNLRT PFRVVEN DDER+T YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSP+PTPRF+RVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTT DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 709 SSGARSLTYVRTEPKPADK 728
           S+GARSLTYVRT+PKPADK
Sbjct: 661 STGARSLTYVRTDPKPADK 676

[Close]

BLAST of Lag0031161 vs. NCBI nr
Match: XP_008461790.1 (PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 599/679 (88.22%), Postives = 640/679 (94.26%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDRVDDRTFK+DF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD RN+S 
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESDSERGK+EKLSSRRRNREW+GI+NEETRV P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEP SKRLRSVVS SN+DTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
           RP+RLQSVAKVPNPMATVIKAVTEA+EDV+RVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G T+ E+D+YGDMNH++DRPYSATYLERSNY GKY+ DE MFE ETGLASDS SENEDV 
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I+GH VFD+SWTAESGVRKG NLRTV FR V+N+DDER+  Y QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ  GQI EL GQKFLQESELQGTRSAVQV ENGEPVT+VNQ+K PA+
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
           +L+KEFQKPPLSANGQFA+TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQLEGAS VTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSPFPT RFTRVPF RG+PGGFR RPP+KLGARSMQWKRD+QT TADNGASL GNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 709 SSGARSLTYVRTEPKPADK 728
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of Lag0031161 vs. NCBI nr
Match: XP_023525351.1 (nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 610/680 (89.71%), Postives = 637/680 (93.68%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDR+DDRTFK+DFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKR RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRCRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DT +
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTIS 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQS+AKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+DL ESSGQ+AEY
Sbjct: 241 HPRRLQSIAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDLKESSGQVAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I GH VFD+SWTAESGVRKGGNLRT PFRVVEN DDER+T YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAVQV ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVQVTENGEPVTIVNQQKKPAA 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQ-TTTADNGASLPGNSV 708
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQ TTT DNGASL G SV
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTTDNGASLYGISV 660

Query: 709 PSSGARSLTYVRTEPKPADK 728
           PS+GARSLTYVRTEPKPADK
Sbjct: 661 PSTGARSLTYVRTEPKPADK 677

[Close]

BLAST of Lag0031161 vs. NCBI nr
Match: XP_022949230.1 (nucleolin 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 609/679 (89.69%), Postives = 636/679 (93.67%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDR+DDRTFK+DFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVP  KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTS +DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I GH VFD+SWTAESGVRKGGNLRT PFRVVEN DDER+T YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 709 SSGARSLTYVRTEPKPADK 728
           S+GARSLTYVRTEPKPADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-15
Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 489 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQK------PPLSAN 548
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      PP +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 549 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 608
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 217

Query: 609 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 637
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 218 IEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR 242

[Close]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-15
Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 489 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQK------PPLSAN 548
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      PP +A 
Sbjct: 97  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 156

Query: 549 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 608
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 157 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 216

Query: 609 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 637
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 217 IEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR 241

[Close]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-15
Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 489 ELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQK------PPLSAN 548
           EL G + +++ EL+  ++ V+ ME         ++ +    L+ E +K      PP +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 549 GQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAY 608
               +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAY 217

Query: 609 VEFMKKEAAENALSLDGTSFMSRILKVVRKNASQ 637
           +EF  KE+   +L+LD + F  R +KVV K  ++
Sbjct: 218 IEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR 242

[Close]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-14
Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 484 PGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQK------P 543
           PG +    G   +++ EL+  ++ V+ ME         ++ +    L+ E +K      P
Sbjct: 102 PGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPP 161

Query: 544 PLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQP 603
           P +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G P
Sbjct: 162 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHP 221

Query: 604 KGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVT--WPRAVRGSPFP 663
           KG AY+EF  KE+   +L+LD + F  R +KV+ K  ++  G S     +PRA   +   
Sbjct: 222 KGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTT 281

Query: 664 TPRFTRVPFPRGIPGGFRPRPPIKLG-ARSMQW 688
               +R  F  G     RPR  +  G AR+  W
Sbjct: 282 NYNSSRSRFYSGF--NSRPRGRVYRGRARATSW 302

[Close]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 6.7e-14
Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 484 PGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAASLEKEFQK------P 543
           PG +    G   +++ EL+  ++ V+ ME         ++ +    L+ E +K      P
Sbjct: 98  PGLVEADPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPP 157

Query: 544 PLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQP 603
           P +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G P
Sbjct: 158 PGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHP 217

Query: 604 KGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVT--WPRAVRGSPFP 663
           KG AY+EF  KE+   +L+LD + F  R +KV+ K  ++  G S     +PR+   +   
Sbjct: 218 KGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYRARTT 277

Query: 664 TPRFTRVPFPRGIPGGFRPRPPIKLG-ARSMQW 688
               +R  F  G     RPR  I  G AR+  W
Sbjct: 278 NYNSSRSRFYSGF--NSRPRGRIYRGRARATSW 298

[Close]

BLAST of Lag0031161 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 599/679 (88.22%), Postives = 640/679 (94.26%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDRVDDRTFK+DF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD RN+S 
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESDSERGK+EKLSSRRRNREW+GI+NEETRV P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEP SKRLRSVVS SN+DTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
           RP+RLQSVAKVPNPMATVIKAVTEA+EDV+RVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G T+ E+D+YGDMNH++DRPYSATYLERSNY GKY+ DE MFE ETGLASDS SENEDV 
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I+GH VFD+SWTAESGVRKG NLRTV FR V+N+DDER+  Y QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ  GQI EL GQKFLQESELQGTRSAVQV ENGEPVT+VNQ+K PA+
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
           +L+KEFQKPPLSANGQFA+TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQLEGAS VTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSPFPT RFTRVPF RG+PGGFR RPP+KLGARSMQWKRD+QT TADNGASL GNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 709 SSGARSLTYVRTEPKPADK 728
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of Lag0031161 vs. ExPASy TrEMBL
Match: A0A1S3CFE4 (nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 599/679 (88.22%), Postives = 640/679 (94.26%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDRVDDRTFK+DF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV+ P KSSA+EVPRPKSPVAEPD RN+S 
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESDSERGK+EKLSSRRRNREW+GI+NEETRV P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEP SKRLRSVVS SN+DTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
           RP+RLQSVAKVPNPMATVIKAVTEA+EDV+RVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G T+ E+D+YGDMNH++DRPYSATYLERSNY GKY+ DE MFE ETGLASDS SENEDV 
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I+GH VFD+SWTAESGVRKG NLRTV FR V+N+DDER+  Y QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ  GQI EL GQKFLQESELQGTRSAVQV ENGEPVT+VNQ+K PA+
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
           +L+KEFQKPPLSANGQFA+TRPLE+ADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KE+AENALSLDGTSFMSRILKVVRKNASQLEGAS VTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSPFPT RFTRVPF RG+PGGFR RPP+KLGARSMQWKRD+QT TADNGASL GNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 709 SSGARSLTYVRTEPKPADK 728
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of Lag0031161 vs. ExPASy TrEMBL
Match: A0A6J1GC70 (nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 609/679 (89.69%), Postives = 636/679 (93.67%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDR+DDRTFK+DFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVP  KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESD ERGKSEKLSSRRRNREWKGI+N+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTS +DTT+
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD+D  ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G TA ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I GH VFD+SWTAESGVRKGGNLRT PFRVVEN DDER+T YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQESEL+GTRSAV+V ENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 709 SSGARSLTYVRTEPKPADK 728
           S+GARSLTYVRTEPKPADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lag0031161 vs. ExPASy TrEMBL
Match: A0A6J1KE94 (uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 608/679 (89.54%), Postives = 633/679 (93.23%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGSEDR+DDRTFK+DFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYV+VLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           AQNELNVFLADDSHSFVSWLWDHLASSM+LYV+ P KSSA EVPR KSPVAEPD    S 
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           NLESD ERGKSEKLSSRRRNREWKGI+NEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQG EREA FQVSIAAPRRLLQFAMRDAVAT +PSN AKEPLSKRLRSVVSTSN+DTT+
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
            P+RLQSVAKVPNPMATVIKAV+EAAEDVIRVKSSSVFDRLGRQSRD DL ESSGQ+AEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
           G T  ED KYGDMNHTQDRPYSATYLE SNYSGKYTP EAMF+AETGLASDSTSE+EDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSLVANSSRDIVN 468
           I GH VFD+SWTAESGVRKGGNLRT PFRVVEN DDER+  YKQK QPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKYKQKHQPSLVANSSRDIVN 420

Query: 469 ISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPAA 528
           ISVNVNTWKPPHYQ PGQIAE GGQKFLQ SEL+GTRSAV+V ENGEPVTIVNQQKKP A
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQGSELRGTRSAVKVTENGEPVTIVNQQKKPVA 480

Query: 529 SLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 588
            L+KEFQKP  SANG  AATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII
Sbjct: 481 HLQKEFQKP--SANG-LAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 589 VTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPRA 648
           VTDATTGQPKGSAYVEFM+KEAAENALSLDGTSF+SRILKV RKNASQ EGASIVTWPRA
Sbjct: 541 VTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRA 600

Query: 649 VRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSVP 708
           VRGSP+PTPRF+RVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTT DNGASL G SVP
Sbjct: 601 VRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVP 660

Query: 709 SSGARSLTYVRTEPKPADK 728
           S+GARSLTYVRTEPKPADK
Sbjct: 661 STGARSLTYVRTEPKPADK 676

[Close]

BLAST of Lag0031161 vs. ExPASy TrEMBL
Match: A0A6J1DFE3 (protein gar2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020309 PE=4 SV=1)

HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 604/680 (88.82%), Postives = 635/680 (93.38%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGS DRVDDRTFK+DFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGR K+E
Sbjct: 1   MGSVDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRSKDE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           A+NELNVFLADDSHSFVSWLWDHLASSMDLYV+ PTKSS +EVP P SPVAEPDRRNDS 
Sbjct: 61  AKNELNVFLADDSHSFVSWLWDHLASSMDLYVE-PTKSSVNEVPIPNSPVAEPDRRNDSH 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
           +LE DSERGKSEKLSSRRRNREWKGI+N+ETRV PRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 HLEPDSERGKSEKLSSRRRNREWKGIANDETRVPPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNNDTTN 288
           DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSN AKEP SKRLRSVVSTSN DTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNVAKEPFSKRLRSVVSTSNTDTTN 240

Query: 289 RPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 348
           RP+RLQSVAKVPNPMATVIKAVTEAAED IRVKSSSVFDRLGRQS DMDLTE SGQLAEY
Sbjct: 241 RPRRLQSVAKVPNPMATVIKAVTEAAEDAIRVKSSSVFDRLGRQSHDMDLTEPSGQLAEY 300

Query: 349 GATAAEDDKYGDMNHTQDRPYSATYLERSNYSGKYTPDEAMFEAETGLASDSTSENEDVT 408
             TA ED KYGD+ HTQD+PYS TYLERSNYSGKYT +E MFE +TGLASDSTSEN+DV 
Sbjct: 301 RVTAVEDPKYGDVTHTQDQPYSGTYLERSNYSGKYTSNETMFEPDTGLASDSTSENDDVN 360

Query: 409 IQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADD-ERITLYKQKDQPSLVANSSRDIV 468
           +QGH  FD+SWTAESGVRK GNLR+VPFRVVENAD+  RIT YKQKDQPSLVANSSRDIV
Sbjct: 361 VQGHRGFDDSWTAESGVRKVGNLRSVPFRVVENADEVTRITQYKQKDQPSLVANSSRDIV 420

Query: 469 NISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMENGEPVTIVNQQKKPA 528
           NISVNVNTWKPPHYQ PGQIAE G QKFLQESELQG+RSAVQV ENG+ VTIVNQQK PA
Sbjct: 421 NISVNVNTWKPPHYQDPGQIAEFGSQKFLQESELQGSRSAVQVTENGKAVTIVNQQKNPA 480

Query: 529 ASLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVI 588
           A+ +KEFQKPP SANGQFAATRPLEDADARTIFVSNVHF ATKDSLSRHFNKFGE+VKVI
Sbjct: 481 ANPQKEFQKPPSSANGQFAATRPLEDADARTIFVSNVHFGATKDSLSRHFNKFGEIVKVI 540

Query: 589 IVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNASQLEGASIVTWPR 648
           IVTDATTGQPKGSAYVEFM+K+AAENALSLDGTSFMSRILKV+RKNASQLEGASIVTWPR
Sbjct: 541 IVTDATTGQPKGSAYVEFMRKDAAENALSLDGTSFMSRILKVIRKNASQLEGASIVTWPR 600

Query: 649 AVRGSPFPTPRFTRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTADNGASLPGNSV 708
           AVRGSP+P+PRF+R PF RGIPGGFRPRPPIKLGARSMQWKRDSQ T+ADNGASL GNS+
Sbjct: 601 AVRGSPYPSPRFSRAPFSRGIPGGFRPRPPIKLGARSMQWKRDSQATSADNGASLSGNSI 660

Query: 709 PSSGARSLTYVRTEPKPADK 728
            SSGARSLTYVRTEPKPADK
Sbjct: 661 TSSGARSLTYVRTEPKPADK 679

[Close]

BLAST of Lag0031161 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.6e-119
Identity = 306/690 (44.35%), Postives = 404/690 (58.55%), Query Frame = 0


Query: 49  MGSEDRVDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 108
           MGS D VDDRTF  DFS EG+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 109 AQNELNVFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPDRRNDSR 168
           A NEL +FL DDS SFV+WLWDHLA S+D Y      SS  E    KS +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 169 NLESDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 228
            L+S+ ++G+S+K +  RR R+W+         +  + VS +      +  S RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWR---------SQPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 229 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTS--NNDT 288
           D +  +REA   VS    RRLLQFA+RDA+A +RP+N++ E   KRLRSVVSTS  N+  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 289 TNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSS-SVFDRLGRQ--SRDMDLTESSG 348
            +  ++++SVA+V NPMATV+KAV EAAED  + KS  SVFDR+     S  +D     G
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLG 300

Query: 349 QLA---EYGATAAEDDKYGDMNHTQDRPYSATYLER--SNYSGKYTPDEAMFEAETGLAS 408
           +++   E     ++  +   + +TQ    +  Y E   +N +G   PD   F ++ G   
Sbjct: 301 EVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTG-LNPD---FSSDRGRLG 360

Query: 409 DSTSENEDVTIQGHGVFDNSWTAESGVRKGGNLRTVPFRVVENADDERITLYKQKDQPSL 468
            S + +   T  G+ +               N  ++  R+V+++   + T Y Q   P +
Sbjct: 361 SSVNVSHPSTYLGNRI--------------NNPNSLQHRLVDDSKRVKGTNY-QNRLPEV 420

Query: 469 VANSSRDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQVMEN---GE 528
              +     + S N++T K    +   +I ++G Q+++ E  L  + +  Q+      G+
Sbjct: 421 A--TKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGD 480

Query: 529 PVTIVNQQKKPAASLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSR 588
             TI N   KPAAS+ KE      S  G  + TRPLEDA +RTIFV+NVHF ATKDSLSR
Sbjct: 481 --TIGNGNVKPAASV-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSR 540

Query: 589 HFNKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVR-KNA 648
           HFNKFGEV+K  IVTD  TGQP GSAY+EF +KEAAENALSLDGTSFMSRILK+V+  N 
Sbjct: 541 HFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNG 600

Query: 649 SQLEGASIVTWPRAVRGSPFPTPRFTRVP-FPRGIPGGFRPRPPIKLGARSMQWKRDSQT 708
              E AS ++W R          RFTR P + RG  G  R R  ++ G RSMQWKRDS  
Sbjct: 601 QNQEAASSMSWSRG--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRDS-- 631

Query: 709 TTADNGASLPGNSVPSSGARSLTYVRTEPK 724
             AD G +   N+V  + ARSLTYVR E K
Sbjct: 661 --ADTGNN---NNVAPNNARSLTYVRAESK 631

[Close]

BLAST of Lag0031161 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-16
Identity = 152/601 (25.29%), Postives = 247/601 (41.10%), Query Frame = 0


Query: 55  VDDRTFKIDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELN 114
           VD  TF +    E  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 115 VFLADDSHSFVSWLWDHLASSMDLYVDTPTKSSASEVPRPKSPVAEPD---------RRN 174
            FL + S  FV  LW       +L V   ++S+++  P+        D         R+ 
Sbjct: 65  AFLKEQSWKFVVCLW-------ELLVKYFSQSNSASGPKTDVDFGSNDTLIKQGLSSRKY 124

Query: 175 DSRNLE-SDSERGKSEKLSSRRRNREWKGISNEETRVTPRSEVSRVKHSSPEQVPSHRKR 234
           D  + + +D     +E+L S         I + E  V+P+  V ++K S  E + S   R
Sbjct: 125 DDYDCKAADGTNSMNEQLIS-----VTAPIDDIEAPVSPK--VEKMKMSRQELIDSPCTR 184

Query: 235 SRADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPLSKRLRSVVSTSNN 294
           +R        R+     S    R++L+  +  A       N AK   S   RS       
Sbjct: 185 AR-------RRKKENWNSSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS------- 244

Query: 295 DTTNRPKRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSS----SVFDRLGRQSRDMDLTE 354
             T + +      ++ +  A   +AV+    D    + +    SV+DRLGR S +  L  
Sbjct: 245 -RTLKKRPYSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVLDT 304

Query: 355 SSGQLAEYGATAAEDDKYGDMNHTQDRPYSATYLE---RSNYSGKYTPDEAMFEAETGLA 414
            S  L+++G    E   +          YS  + E   R   +  Y      F+ +    
Sbjct: 305 ESRTLSKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKDRKPK 364

Query: 415 SDSTSENEDVTIQGHGVFDNSWTAESGV--RKGGNLRTVPFRVVENADDERITLYKQKDQ 474
           S++ +  E      H  ++ S     G+     G    VP              YKQ +Q
Sbjct: 365 SETITSTEP-----HIAYNLSRKRRYGMVSPNSGEFSYVP-------------QYKQAEQ 424

Query: 475 ----PSLVANSS--RDIVNISVNVNTWKPPHYQGPGQIAELGGQKFLQESELQGTRSAVQ 534
               PSL+++ S  +DI +   NV                   ++ +QE EL+       
Sbjct: 425 DFEKPSLLSHQSTKQDIFSEIKNV-------------------KEKMQELELR------- 484

Query: 535 VMENGEPVTIVNQQKKPAASLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAAT 594
                     + Q K+      +E +  P S   Q+      + +++R I V+NV++AA 
Sbjct: 485 ----------IIQSKQLKKQKVEERKPSPQSGESQYQE----DVSESRVIHVTNVYYAAK 517

Query: 595 KDSLSRHF-NKFGEVVKVIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILK 630
           K+++S  F +K G V  VI+VTD  T  PKG+A+V F  KE+   A++L GT F SR +K
Sbjct: 545 KEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYSRPIK 517

[Close]

BLAST of Lag0031161 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 73.6 bits (179), Expect = 7.6e-13
Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 528 ASLEKEF--QKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVK 587
           A +EKE   Q P   A  Q       E+ DAR++FV NV +A T + + +HF   G V +
Sbjct: 65  AKVEKEMGAQDPASIAANQAGK----EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 124

Query: 588 VIIVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 636
           V I+TD   GQPKG AYVEF++ EA + AL L+ +    R LKV++K  +
Sbjct: 125 VTILTD-KFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTN 169

[Close]

BLAST of Lag0031161 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-12
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 530 LEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIV 589
           LE E++K  ++ +G  AA +  E+ D+R+I+V NV +A T + + +HF   G V +V I+
Sbjct: 117 LEFEYEKEIIN-SGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 176

Query: 590 TDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 636
           TD   GQPKG AYVEF++ EA +N+L L+ +    R +KV  K  +
Sbjct: 177 TD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 218

[Close]

BLAST of Lag0031161 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 6.4e-12
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 528 ASLEKEFQKPPLSANGQFAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVI 587
           A  EK+       + G  AA +  E+ D+R+I+V NV +A T + + +HF   G V +V 
Sbjct: 76  AKAEKDMGASQDPSGGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 135

Query: 588 IVTDATTGQPKGSAYVEFMKKEAAENALSLDGTSFMSRILKVVRKNAS 636
           I+TD   GQPKG AYVEF++ EA +N+L L+ +    R +KV  K  +
Sbjct: 136 ILTD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 180

The following BLAST results are available for this feature:

BLAST of Lag0031161 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904558.1	0.0e+00	89.25	nucleolin 1 isoform X1 [Benincasa hispida]	[more]
KAG7036580.1	0.0e+00	89.84	Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_008461790.1	0.0e+00	88.22	PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isofo...	[more]
XP_023525351.1	0.0e+00	89.71	nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949230.1	0.0e+00	89.69	nucleolin 1-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lag0031161 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DDY9	2.1e-15	33.77	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	2.1e-15	33.77	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q6NVP7	2.7e-15	33.77	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]
Q86U42	5.1e-14	30.52	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]
Q8CCS6	6.7e-14	30.52	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]

BLAST of Lag0031161 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3W4	0.0e+00	88.22	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CFE4	0.0e+00	88.22	nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1	[more]
A0A6J1GC70	0.0e+00	89.69	nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 S...	[more]
A0A6J1KE94	0.0e+00	89.54	uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DFE3	0.0e+00	88.82	protein gar2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020309 PE=4 SV=1	[more]

BLAST of Lag0031161 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	4.6e-119	44.35	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	5.6e-16	25.29	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	7.6e-13	41.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.2	2.2e-12	40.57	polyadenylate-binding protein 1	[more]
AT5G51120.1	6.4e-12	38.89	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 558..630 e-value: 1.8E-21 score: 87.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 559..627 e-value: 1.0E-17 score: 63.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 557..634 score: 17.182348
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 56..139 e-value: 3.5E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 660..727
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 686..716
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..289
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 53..723
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 72..135 e-value: 2.7E-7 score: 30.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 504..638 e-value: 1.2E-24 score: 89.1
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 53..723
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 550..631

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031161.1	Lag0031161.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding