Lag0031150 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031150
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Cellulose synthase
Location	chr11: 5322538 .. 5327901 (+)
RNA-Seq Expression	Lag0031150
Synteny	Lag0031150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTGCTGAAGAACCGATTCTCTCGCGGTTGGACCGGCTCGATCATATGGTGAGTTGGATTTCGACCAAAAGGAAAATGAAAATGAAAAACAAAAATGTTTTTTTTTTTTTTTTTTTTAAATGTGTTCTTGTGGAAAGGGATGGGGTTGGTGTTTGTTTCTCGGGAAAATGACTGAGAAAATGGGAAGGATTGTGAGGGATTCGTGGCTTTGGTGCATGGGCTGTCTGTTTTTTTTTTTTTTTTTTCTTTTCTTTTCTTTTCTTTTGATGATTCGTTTTGTTATTTTGATGTTGATGTTTATTGCTAGTTTGTTTGTTTTTTTTCGTATTATTCGGAAATTATTTAGTAGAATGAATTTGTGAATTGGGAGTGTTTGTGTTTTCGTCTACTTTGGTGTTATTTTTTTGGGTTTAAAGCTTTTTTATTTTCAACCCACAGGTGTGAAAATTAAAAACTCTGATCGAGATAGAGTCGAATATGACAAAGTATTAATTTTTAATAATGTCTTTGATTTTTTTTTTAATTAAAATACTATTTTTGTTTTATAGTTTTGTTTCATTTTAGTTAGAAATGTCTAATTAGTTTAATGGGGTGTATAAAGGGATATTTACCCACCTTTATACAACAAAGTATTAACTTACTTTTAATAATGTCTTTGATTTTTTTTTTTTTTTTGTTTAAATTAAAAAACTATTTTGGTTCTTTGGTTTTGTTTCGTTTTTGTTTCGTTTTTTAATTGAAAATTATTATCATTAAATTAGTTTTAATAAGAATTAGGAATCATTTTTAAATTTTATTGAAAATATATAGGACGGGATAAAATAAATGTTAACACAAACATAACTCAGGTTGTACAGTCAATTTTCTTTTCTTTTTATTTTTTTATTGGTTAAATTGTTGGTAATTTTACCATCTAATTTTCTATAGAGGTTAACTTCTCTAAGTTTTTAATGAATTTGAAGTTGGAAAATATAGGGATTTGGTTTGTTTTTTTTTTTTTTTGGGTTAAATAATTAATGAATGAAAATAATTGTAATAGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGGAAGTCTCCAAAGAGCTCGTGTGCATCCACTCCATCAAGTGGGGCCCTCACGAGCGATTACCACACGTCGTCCGTTGATCTCTCGCCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTCACTGAGCTCAAAGGAAGTCTCGTCGATAGAATGGACAATATAGAGGATAGAGTCCTCAAGGTAAAAGTTAAATCTTTTTTTTTTTTTAATCAATTCAGCAGATAAAACTAAATAAATGCTTTAATTTTCTAAATAAATGAAAAATATTTACAAAAGATTAATTTATCAATATCCAAGATTAAACAAATGATGGTATTATTTTCTTTATTGCAATAATAACTTACATGTTAATATTTTAGTAGCCTTTTGGGTTTTCTTTTTCTTTTTTAATATTTATTAACTATACTATTTTTTGTAGTCAATCTTAAAATTAGTTTATGTCAACTTTAATTTGACAGAAATTTAGAAGAAGTTTAGAGGATTTTTTTTTTTTTTTTTACATCAACTTTCATCCCTAACTACTTTCATCCCTAACTAAGAAGGCGCAAGAGCAACATTACAAAACGGATTGAAAATAGCAAAAGATCCAAGAAAACACTACAAACTAAGGGACAACCTCGTTCCCACCCAAAATATATCATCACCCAAAGCCAAAATCACCATATAGAGCCCAAACACTGAATCCCCTCTCGAACTAAATCCACAATTATGACATCACAAAGTTAGCTACCACATATGCTTCATACTTGCTCTTTTCCACCTCGTCTTGCCCCCGAACTCATGGTTTAGGCCTACAAATATTATTGTCAAAACAAAGCATTCTTTTCCACCTCGTCTTGCCCCTGAACTCATAAGTTCAGGCCTGCAAATATTATTGTCAGAACAAAGCTTTTGCATATAGAGATTAGTCCAAATAAGTAATTTGGGAGAACACACGTTTCACCCTAGAGTAGAAGTGTAGAGGAATTGAAGACTTTTTTTTTTTTTTTTTTTTTTTTAAGGAGGTTTAAAGTCTTTTTGGTCGAGGATCAAAATAGATTTATTTTTATTTTATTTTATTTTGAGTCAATGAGAATTAATTGTATTTCTATATTTATAGTGTTTTTGAAAATGTGTTTGGTTGCCAATTTAGAAATCAAACCAAGATCATAGTTACTCACTAAATTTTAGGTCGATTTTTTTTAATTATAATTTAGGTTGAATTTTAACTATACTCATTTAGGTTAATTTTTTGTATATATATTATTTTACAATATCATAGAATATATAATATATTAAGGATAATTGTAATGGGTGGCAACATGAAGGTAAATAATTGCAAATATAGCAATTTTTAAAAATATTTGCAAATATGGCAAAATTTTTGAATTAATTTTTTATATTCCTAAATTGCCCCTGTGTGTCCATCTTCTTCTTTCTCGTCAGTTTTTTTTTTTCTGATAGAAAGTCTTTTTATTACTGATAGATTCTATCAGTAGTAGAAAAATTTTCTATCAGTGATAGAAAGTTTCTATCACTGATAGAATAAAGTTTCTATCAGTGATATTTCTATCACTGATAGATTCTATTAGTGGTAGAAAAATTTTCTATCGGCGATAGAAAGTTTCTATCACTAATATTTCTATGACTGATAGATTCTATCAGTGGTAGAAAAATTTTCTATCAGTGATAGAAAGTTTCTATCACTGATAGAATAGAAGATTTCTATCACTAATAGAAACTTTGATAAAAAATCTTCCAATCCTTGATCACCCATAAAAATCTTTCTATCTCCGATAGAAATCTTTCTATCACCGATAGAATCTATAAGTGATAGAAAAACTTTCTATCACCGATAGAAAAGCTTTCTATCAGTGATAAAAGATTTCTATCACTGATAGAAATTTTTACTATTCTATCAGTGATAGAAAGATATTATATCAATGATAGAAAATTCTTGATAGAAAATATTTCAATCCCTAATAGAACCTATCAGTGATAGAAATATTCTATCACTTATAGAAATTTTTTCTATGGTGATAGAAAAAATTTCTATCATTCATAGAAAATCTTTCTATGAGTGATAGAAAAACTTTCTATTTCTATCACTGAGACTGATAGAAAAACTTTTCGTGAGTTATAGAAAATATTTATATCACTGATACTTTTCTACCAGTGATAGAAGATCTTTTGTTTCTATCAGCGATGGTGATACATGGTGAAATCGAGCATTGAAAAATAAAGCAAAAACGAACGATTATAGAAATCAAACACTGAAAAACAAAAACCAAACACTGATAGAAAACCAAATAACAACAACCAAACACTGATAGAACACCGAACAAGTGATAGAAAAATATCTATCGCCGATAGAATCTATCAGTAGTAGAAAAAATTTATATCATATGATAGAATCTATCAGTGAAAGAAAATTTCTATCACTGATAGAAAATCTTTCTATCACCGATAGAATCTATCAGTGATAGAAAGATTTTCTATCAGTGAAAGAAAATCTGGAGGGGTATTTTAGTAAATGCAACACACAAACTATTAGATTTTGCCATTTTTGCAATTTTTTTTGTGGGTTGCTAGATTTGCAATTATTTTGGTCCATATTGCTATCCTTGCAACCGGCCCATATATTAATATAAAAAATAAAATGATGGTATAACATGAAACTCAATCTCATTCAAATTTTTACATTTTCTAAATATAATTGTGTGTTGTCTAAATTACATGAATTAGACCGAATTTCAAATATGTCTATGAGCTTTCAATTTTGTTAGGTTCCTATATTTTAAAAAGTATCTAATAGATACTTAAAACTTTTGGTCTTGTTTCTAATGACTCTTGACCTATTCGATATTTTTAAAAATTTACAAGTCTATTAGATACAAAATTGGAAGTTTAGAGTCTCAATAGACATGAAATTCAATTTTTTTTTTTTTTGAAAAGAACATATAATTCAATTTTTAAATATAGTAGATTGGTTAATTTTTAAAAATCTCTAATATGTCAGAGACTTATTAGACACAAAGTAATTTAAGGATCTAGTAGACATTTCTAAGGTTTAGAGACCTATTGAAAATAAAATTGAAAGTTTAGAGTCCCAATAGACACATAAAATTCAACTTAAGGACTTATTAGATACGAAGTAATTTAGAGATCTAGTAGACATTTTTAAAGTTTAGGGACCTATTCAAAATATAAAATTGAAAGTTTAAGACTTGTTTGGTAGGTAATCTGGATTCTGTTTTATGTTTTCAGATTCATTGAATTCAATGAATATGCATTTGGCAGACGTGTTTCTGAAAATTGTTTCCGGATCCTGTGATCCAAATAGTGGAAATTCTGAAAAACAACTTTTTTATGTTTTCGTTGTATCCAAATTTTGAATTTCAAAATTTTAAATGCAGAATTAATTTAAAAAAGATAAAAACTTCAATAAATATAGTATTTCATGTTATATACTCAATTTATTTTAATGAAATTAAAATTTGTATAATATAATGTATTATAAATTATATGATATTGTAAAATAATAATAATAATAATAAATTTATAAAACATAACATTTTTATAAATTAATTAATAATATTTTATATTCAAATTATGATTTAGTTGATAACTACAAAGAATTTATTGTTTATAAATATATTATCGAACACATTTTGAACCATTATTTAAATTCAGATCCAATTTCTGGATTTGCTACCAAACACATATCTGAAAACATGAAATGCAACTCTGTTTTCATTGAATCCCTTGTTTTCAAATTCTTGTTTTCAGATCACCAACCAAACGGACCCTTAGAGATTTGCTGAACACTTTTAAATTTTAAGGACTTAATTAGTAATTTATAAGACTAAACTTATAATAAAGCAAGTATCAAGAATATTGTTTTTCAAAATTTCTACCTCTTTATACCATAGAAAAAACAGTTTTTAATTTTCAAATTCAAAAATTATTTTTAGAATTTCTACTGATTTGGATCACAAAGTAAAAAAAAAATTGTCAAACATATATTTGTTAAATATAGTGAATTTAATAAATCTGAAAAATATCCTTATATTTCTTCTAAAATTTATTGTAAGCTCAAAATAGTTTTGACAATCATTTTATTAATTCATTTTTTATGCACTGAATCTGGACAGCTTGCTTTGCAATTAGAGGGAGAGATAGAAAGGGAGAGAGAGATGTTAATGGTTGAGAAGAATAAGAAGAAGAAGAGCTTTAAACAACTTGTTCAACTCTGCATCACAGGACAGGGAACAACTGAGTCCTCACCTTGA

mRNA sequence

ATGGCTGTTGCTGAAGAACCGATTCTCTCGCGGTTGGACCGGCTCGATCATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGGAAGTCTCCAAAGAGCTCGTGTGCATCCACTCCATCAAGTGGGGCCCTCACGAGCGATTACCACACGTCGTCCGTTGATCTCTCGCCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTCACTGAGCTCAAAGGAAGTCTCGTCGATAGAATGGACAATATAGAGGATAGAGTCCTCAAGCTTGCTTTGCAATTAGAGGGAGAGATAGAAAGGGAGAGAGAGATGTTAATGGTTGAGAAGAATAAGAAGAAGAAGAGCTTTAAACAACTTGTTCAACTCTGCATCACAGGACAGGGAACAACTGAGTCCTCACCTTGA

Coding sequence (CDS)

ATGGCTGTTGCTGAAGAACCGATTCTCTCGCGGTTGGACCGGCTCGATCATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGGAAGTCTCCAAAGAGCTCGTGTGCATCCACTCCATCAAGTGGGGCCCTCACGAGCGATTACCACACGTCGTCCGTTGATCTCTCGCCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTCACTGAGCTCAAAGGAAGTCTCGTCGATAGAATGGACAATATAGAGGATAGAGTCCTCAAGCTTGCTTTGCAATTAGAGGGAGAGATAGAAAGGGAGAGAGAGATGTTAATGGTTGAGAAGAATAAGAAGAAGAAGAGCTTTAAACAACTTGTTCAACTCTGCATCACAGGACAGGGAACAACTGAGTCCTCACCTTGA

Protein sequence

MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKSLEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEKNKKKKSFKQLVQLCITGQGTTESSP

Homology

[Close]

BLAST of Lag0031150 vs. NCBI nr
Match: XP_038905600.1 (uncharacterized protein LOC120091575 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 120/138 (86.96%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKS 60
           MAV EEPILSRLDRLD+MLRRLEEIRGCGKSPKSSCASTPSSG LTSDYHTSSVDLSPK 
Sbjct: 1   MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKC 60

Query: 61  LEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEKNKK-KK 120
           LEKHCRPINHV+KV ELKGSLV+RMDN+EDRVLKL +Q+EGEIEREREM++VEKNKK KK
Sbjct: 61  LEKHCRPINHVIKVAELKGSLVERMDNLEDRVLKLCVQVEGEIEREREMMIVEKNKKHKK 120

Query: 121 SFKQLVQLCITGQGTTES 138
           SFKQLVQ C+TGQGT +S
Sbjct: 121 SFKQLVQQCMTGQGTRKS 138

[Close]

BLAST of Lag0031150 vs. NCBI nr
Match: KAG6606879.1 (hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.8 bits (582), Expect = 2.9e-56
Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKS 60
           M VAEEPILSRL+RLD+MLRRLEEIRGCGKSPKSSCASTPSSG LTSDY TSSVDLSPK+
Sbjct: 1   MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKT 60

Query: 61  LEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEKNKK-KK 120
           LEKHCRPINHVVKVTEL+GSLV+RMDNIEDRVLKL LQ+EGEIERE+EM+MVEK+KK KK
Sbjct: 61  LEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMIMVEKDKKPKK 120

Query: 121 SFKQLVQLCITGQG 134
           SFKQL+QLC TGQG
Sbjct: 121 SFKQLIQLCATGQG 134

[Close]

BLAST of Lag0031150 vs. NCBI nr
Match: XP_004151057.1 (uncharacterized protein LOC101205386 [Cucumis sativus] >KGN58589.1 hypothetical protein Csa_001276 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 117/140 (83.57%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKS 60
           MAVAEEPILSRLDRLD MLRRLEEIRGCGKSPKSSCASTPSSG LTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDVMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEK--NKKK 120
           LEKHCRPINHVVKV ELKGSLV+RMDN+EDRVLKL +Q+EG++ERE++M+MVEK   K K
Sbjct: 61  LEKHCRPINHVVKVAELKGSLVERMDNLEDRVLKLCIQVEGDLEREKDMIMVEKKERKPK 120

Query: 121 KSFKQLVQLCITGQGTTESS 139
           +SFKQLVQ C+TGQGT   S
Sbjct: 121 RSFKQLVQRCMTGQGTRRDS 140

[Close]

BLAST of Lag0031150 vs. NCBI nr
Match: XP_008461800.1 (PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo] >KAA0048356.1 uncharacterized protein E6C27_scaffold264G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 116/141 (82.27%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKS 60
           MAVAEEPILSRLDRLD+MLRRLEEI+GC KSPKSSCASTPSSG LTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNMLRRLEEIKGCAKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEKNKK--- 120
           LEKHCRPINHVV+V ELKGSLV+RMDN+EDRVLKL +Q+EGE+ERE++M+MV++ KK   
Sbjct: 61  LEKHCRPINHVVRVAELKGSLVERMDNLEDRVLKLCIQVEGEMEREKDMVMVDQKKKKKP 120

Query: 121 KKSFKQLVQLCITGQGTTESS 139
           KKSFKQLVQ C+TGQGTT  S
Sbjct: 121 KKSFKQLVQQCMTGQGTTRDS 141

[Close]

BLAST of Lag0031150 vs. NCBI nr
Match: XP_022998501.1 (uncharacterized protein LOC111493115 [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 3.2e-55
Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MAVAEEPILSRLDRLDHMLRRLEEIRGCGKSPKSSCASTPSSGALTSDYHTSSVDLSPKS 60
           M VA+EPILSRL+RLD+MLRRLEEIRGCGKSPKSSCASTPSSG LTSDY TSSVDLSPK+
Sbjct: 1   MGVADEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYLTSSVDLSPKT 60

Query: 61  LEKHCRPINHVVKVTELKGSLVDRMDNIEDRVLKLALQLEGEIEREREMLMVEKNKK-KK 120
           LEKHCRPINHVVKVTEL+GSLV+RMDNIEDRVLKL LQ EGEIE+E+EM+MVEK+KK KK
Sbjct: 61  LEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQTEGEIEKEKEMIMVEKDKKPKK 120

Query: 121 SFKQLVQLCITGQG 134
           SFKQLVQLC+TGQG
Sbjct: 121 SFKQLVQLCMTGQG 134

The following BLAST results are available for this feature:

BLAST of Lag0031150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905600.1	2.0e-57	86.96	uncharacterized protein LOC120091575 [Benincasa hispida]	[more]
KAG6606879.1	2.9e-56	88.06	hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004151057.1	1.9e-55	83.57	uncharacterized protein LOC101205386 [Cucumis sativus] >KGN58589.1 hypothetical ...	[more]
XP_008461800.1	1.9e-55	82.27	PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo] >KAA0048356.1 unc...	[more]
XP_022998501.1	3.2e-55	87.31	uncharacterized protein LOC111493115 [Cucurbita maxima]	[more]

BLAST of Lag0031150 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	PANTHER	PTHR34190:SF4	EXPRESSED PROTEIN	coord: 1..136
None	No IPR available	PANTHER	PTHR34190	EXPRESSED PROTEIN	coord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031150.1	Lag0031150.1	mRNA