Lag0030905 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030905
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	pyrophosphorylase 4
Location	chr11: 2709014 .. 2713562 (-)
RNA-Seq Expression	Lag0030905
Synteny	Lag0030905

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTAAATAACATATTTTAATAAATATTAATATCTTTTTTGAGACTTTCAAATTAATATTGATGTTATTTCCCTAAACTTATGCAATCAATACCTTTGAGAAAAAAAAACCTTTGAGAAAAAAAAAAATTATGCAATCAATGGTGAGACCTTGAAATGCTATATGTTATAGGTGATTTTGGACGACCGTGATGTACAAGGAGCTGACGAGGACAATCAGATAGAAATCGGACTGGAGGATGGACCCCAGGGGCGAAACGGACTAGTGGGTCAGGCCAAGACCGAAGGGGTCGAGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCGCCTGCGTGGGTCAAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTTTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGGTATCTATACCCCTCTTCGCCACTGAAGAGAGGACCCAAATTCTATCCCCAAACTCTACTCTCTATTCTCTACTCTCTTCTCTTACTCTCTAGCCCTCGTACTTCCATTTTCTGACTTAAGCATCGGAGTCGGCACCACACTGGTGTGCAGGTTTTCCGTCTTGCAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCCTCCAACCAAAATCGACCATCAACACTATATGTATTATCTCACCATTTGATCTTTGTTCAAATAACACTACAACAAATTATACTTTTTATGTCGGACAAAAAAAAAGACGCTGGACTTTTAATGTCGGACGAAAAAACCCACGGAGCTTTTAATGTCGGACATTTAAAAAATGCGCGTTTAAGGGGTGAAATTTTTTTGGAAATCCTTTAATGTCGGGCTATATGACCGACATTAAATAGGTGTATTTAACCTAACCAACATGCCTACTAATATAATCCTTGTTTTTCTCTCCCCGAAGAAAACCCATTTTCCCTTCTTTGGTCTCTCACTGATCCAATTTTCTTCCCCTCATTGGCATGAATTTCTTCCTTTCAAAGGCGACGCGACTTTCTTCCCTTCGTTGGCGCTGTGTTCGTCTTCTCTCCAACATTTTTTTCGTCTTCTCCAACATTTTTTTTCTTCTTCTTCGTGCGTGGTTTTCTTCCTCTCTCCCCGTCGGCGTGGTTTGCTTGTGGATTGCGTTAGATGTGAGTTGGTTTCATTTTTCGCTGTGGGTCGTGTTGGTCGTGGCTTGTGCTCACCATCTACTATTTTTTTTATTGGTTTTTGCTGTTAATTTGTCGCAGACCATGATCGATTTCTAGGGTTTTTTTAATCTATTTTGTATTAGTAATTGATTTTGTGTTTTAACAGATATTTGTTGCTGTGGGTCATTCTATTTTTTGAGTTTTAAAGATTATTGTTCTTCTTTTTTGGAGTTTATGTGTCGTGTTTGTTGATCTTAGATTTTTTTACCATTTTGAGCGACTTGAATGTGCTTTCTAAAATCGGGTGTGAGATTCAACTATGTTTGTTTTCAGAAATGGATGGGTTTAAGGGATAAACGAAGTCTATTTGTTGTATTTTTGTTCACTGGAAATTTTTTTATTGATTTGTCTTTGTTGGGTTTGTTGGCAAGTTGGATGTCGAACTATCACTTATTGAGATTCTTTTCTATTGTTTCAAATGTTACAGGGTGTTCAAATGCTAGGCGACTCCACATCGTGTGGCTGAAACTCCATCTTCTTCCAAAACCATTTGTGTAAAGCTTTCTTTGTCTGTTTATCACTCAGATTTATTTCCATTCGCTCAAGACATGCCTCAAATATGATTTTGTAATTAAACTTTTGTGTCTCTTGTGGAAAGTGAGTGAATAGTATCTTCTATCAAGATTAATATATGAATTTTTAGAATTTATTGTTGAACCTATTCTGTTTTAAGCCCACAACACTTTCACTCCATGGAATTTAATTTTTCGGTCTCCTTTTCATGTTCATCCATACTTAACACCAAGTTGGTGCTACTTGTTCAAGCTCTTGCTTATTGATAGTGACTACTTCAAGCTCTTGCTTATTGGAGACTATGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGTTGTAAGTTTCAGAATTGTATCACTTTTTGTTCTACATTTGTAACTCTTAGGTTATATGCTTTCTTTCACTCTCATTGATCTCAAGAGTTCAAGATCAATAAAGTTCTCTTTGTGCAACTGACTTTCATTGTTGTCTTTTTCTAACCTTGATGGAGAAGGTGCAGTGAAAGGGCAAATAGAAAAGATTTCAAAATTTGTTGCCCACGTTTTCCATTTCTGATAACACACTTCATCTTCATTAAAATCTATTTTTCATTACCTCTAGATTCTTATGTTGTGGATTATTGAATGTAGGCACTTAGTGCTCGTTATATATTAATCCAAACCCCGTAGATCTAATGCAATGTAAAGGAAACGAAATGTATGTTTGCATTAGAAAGTTTCAAAAGTTCTTTTAGAAATTAGATGTTGTAGTTAAAGGTTTTGGTTTTGAAAGCTCCTAATCATTTTCAATGCTATCATATTTGTGGCATCAAACTCTATGAAAGCAGATATCTTATCAAGAAAAGAACATTGGTGGCATCAGTGGCATGGCATGTGATCCATATTTTTCAGTTTCTACTTTAGGTTTCTTTCTTACTCTCATGATATTGGAGAAATTGCTTTCTTGTTCTTCCATTTTAGCAATTATTACATTGCATAGGTGCCAAGCTCTTTTCTTGTTTAGAAAGTTGCTTTTTTGGAAGATTTATTAATAATTATAAACTGAACTAAGTAGTTTCTTTTGTATCTTATATACAGGATGACAAATGTATATATCTATGTGTGCGTGTGTGTATATATTTGCAAAAAAAAAAAGCAAGGAATATTTGTAAGAAAAAAGAATGAGTATATCTTTTGATTGAAATGCCATTTTTTCATAACCACTTGGCACTTAGCTTGTTGAGGAATCTTGAGTAGATCACTGATGATAGTCATGATTTCTGATCTGTTTATTTAGATTTCCAAATGCATAAAGGCAAGCATGAGGGTGAGAATATTAGTTGTCTTAAACAAGGATTGCTTTTATGTACAGAAGATGTATGCATGATTTGTAGATCTTATGAACTCCACAAGATCTCCCGAGAACTTGTTTGGGGCAATTGGCTGGAATCTTGATCGATATTTTCTTTTTCTGTTTTTTATAGTTGCTTATCAGAAATTTGTCTGTTAGAATGATTTAGATTTTAAAATGTTAGATTGCTAATGCTGGCAGGAAAATGTGCCAATCGGCTGCTTGCAACATCTGGCTTACCTCTGATTGCAAGACAGATGAAGGTGCAACTTTTGATAATTTTTTTCCAGCTTATTTCGTTTTTTGAACAATAAGTATTTACAAACTGCTTAATTTATCCTGTTTATTCTTGGTTTGTAGAGGTTAGAATTGAGTTCTATATGGGCCCTCCTTGCAGCATTTGAAGACCCTCTTCCTATTATATAAAAATTAGCAATTGACTTGAGGTTTATTAAAATGAGTTGCCTATTATATGAAAATATGTTCTATTACTTTCAACCAAACTCCAACTGAGTATTACTATTTATGTGGCAGGTTGTTGAAATTGGCAAAGGCAGCAAGGTTAAATATGAGCTTGACAAGGCCAGTGGTCTTATAAAAGTGTGTTCACTAACTCTCTTACTGTTCTTTGCTTCTATACTAAATCTATGCAGTAAGGGCTGCTTTCTAAGAAGTATTAGTAATTCAACTTGCTTGGTCACATTGCCTCAAGGGTGTGATTTATGGTAGTCTCTCATTTGGAAAGTTTGAGGGAAGTATAGACGTCTATTGTTTGGTGTCTATTGAACAACTTTTCAAAATCTTATGATATTAGAACACCATAAATCACACCGTTGAGGCTACAATTACTTGGATATTAGGTTTTCTTGACTATCAAACATTGCGTTATTTGTAATCAGTCTCATGATTAATTTGTCAATTGTGCACTATGGAATATATTGACATTCTTGCATACAATATAACTAAAATTGATTTATCCATTGGAGTTTCTCGATGCATAAAAGTCTTTGACTTCTCTTCGATAATGTCTATGTTTAGATGCCTTTATCCATTGATTTTCAACATTTTGTAAAAGTCTTTGAATTTTGTAAGCATTTTGGATTCTCCGTTCAAGCCTTTCAAGGCCTCTTGGGATTTCACTAAACACTCCATTGTCGCTGGCCTCATGCTCTGGTAATTTCCTCAATGCTCTGTTTCTCGTTCTGTTCTTCATTTACTCACAAACTTACAACATTAACTTCTCCATTGTCAATGCAAATTACTGCACACCAAGTGTTCTATAATCCTCTAGATGTTGTTGGTTATTAGCTCTAATTTACTCATATGTTTTGGAGCTTTAGTTTTAGTTTAAGGATTTGATTGGAGATATGTGTCGATTGTATTTTACTTACGTTTTTGCTTTGTATAAGGTTTGGAATTCATCTTGTTAAGTGA

mRNA sequence

ATGAATGTGATTTTGGACGACCGTGATGTACAAGGAGCTGACGAGGACAATCAGATAGAAATCGGACTGGAGGATGGACCCCAGGGGCGAAACGGACTAGTGGGTCAGGCCAAGACCGAAGGGGTCGAGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCGCCTGCGTGGGTCAAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTTTGGCCGCCCCGGTTCCGCCTGGTTTTCCGTCTTGCAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGTGACTACTTCAAGCTCTTGCTTATTGGAGACTATGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGTTATTTCCAAATGCATAAAGGCAAGCATGAGGGTGAGAATATTAGTTGTCTTAAACAAGGATTGCTTTTATGTACAGAAGATATTGCTAATGCTGGCAGGAAAATGTGCCAATCGGCTGCTTGCAACATCTGGCTTACCTCTGATTGCAAGACAGATGAAGGTTGTTGAAATTGGCAAAGGCAGCAAGGTTAAATATGAGCTTGACAAGGCCAGTGGTCTTATAAAATCTTTGAATTTTGTAAGCATTTTGGATTCTCCGTTCAAGCCTTTCAAGGCCTCTTGGGATTTCACTAAACACTCCATTGTCGCTGGCCTCATGCTCTGGTTTGGAATTCATCTTGTTAAGTGA

Coding sequence (CDS)

ATGAATGTGATTTTGGACGACCGTGATGTACAAGGAGCTGACGAGGACAATCAGATAGAAATCGGACTGGAGGATGGACCCCAGGGGCGAAACGGACTAGTGGGTCAGGCCAAGACCGAAGGGGTCGAGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCGCCTGCGTGGGTCAAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTTTGGCCGCCCCGGTTCCGCCTGGTTTTCCGTCTTGCAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGTGACTACTTCAAGCTCTTGCTTATTGGAGACTATGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGTTATTTCCAAATGCATAAAGGCAAGCATGAGGGTGAGAATATTAGTTGTCTTAAACAAGGATTGCTTTTATGTACAGAAGATATTGCTAATGCTGGCAGGAAAATGTGCCAATCGGCTGCTTGCAACATCTGGCTTACCTCTGATTGCAAGACAGATGAAGGTTGTTGAAATTGGCAAAGGCAGCAAGGTTAAATATGAGCTTGACAAGGCCAGTGGTCTTATAAAATCTTTGAATTTTGTAAGCATTTTGGATTCTCCGTTCAAGCCTTTCAAGGCCTCTTGGGATTTCACTAAACACTCCATTGTCGCTGGCCTCATGCTCTGGTTTGGAATTCATCTTGTTAAGTGA

Protein sequence

MNVILDDRDVQGADEDNQIEIGLEDGPQGRNGLVGQAKTEGVELLARPPARPRPACVGQARLAPYGPYRLWPPRFRLVFRLAGHVFPPHLQIYRWWHVKVSDYFKLLLIGDYGVGKSCLLLRFVISKCIKASMRVRILVVLNKDCFYVQKILLMLAGKCANRLLATSGLPLIARQMKVVEIGKGSKVKYELDKASGLIKSLNFVSILDSPFKPFKASWDFTKHSIVAGLMLWFGIHLVK

Homology

[Close]

BLAST of Lag0030905 vs. TAIR 10
Match: AT3G53620.1 (pyrophosphorylase 4 )

HSP 1 Score: 42.7 bits (99), Expect = 4.7e-04
Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 178 VVEIGKGSKVKYELDKASGLIK 200
           VVEIGKGSKVKYELDK +GLIK
Sbjct: 56  VVEIGKGSKVKYELDKTTGLIK 77

The following BLAST results are available for this feature:

BLAST of Lag0030905 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0030905 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0030905 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0030905 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53620.1	4.7e-04	90.91	pyrophosphorylase 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 101..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030905.1	Lag0030905.1	mRNA