Lag0030904 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0030904
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionEncodes a protein whose expression is responsive to nematode infection.
Locationchr11: 2702555 .. 2703160 (-)
RNA-Seq ExpressionLag0030904
SyntenyLag0030904
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTCCATGGGAAGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCATAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCAACCACCGCCCGCTGCAGCGCGTCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCGTTCGATCGAATTTCATGGAGGTGTCGGATGGCGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGTGGAGTTTGAAAGGTTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCAGAGAGGATTGTGGATTTTTGCATGAGAGACAACGGTGTCGACGACGACCAAAATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTAGTAAGAAAGCGCGTGAGGTGCGTTTTTTTTAA

mRNA sequence

ATGGGAAATTCCATGGGAAGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCATAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCAACCACCGCCCGCTGCAGCGCGTCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCGTTCGATCGAATTTCATGGAGGTGTCGGATGGCGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGTGGAGTTTGAAAGGTTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCAGAGAGGATTGTGGATTTTTGCATGAGAGACAACGGTGTCGACGACGACCAAAATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTAGTAAGAAAGCGCGTGAGGTGCGTTTTTTTTAA

Coding sequence (CDS)

ATGGGAAATTCCATGGGAAGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCATAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCAACCACCGCCCGCTGCAGCGCGTCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCGTTCGATCGAATTTCATGGAGGTGTCGGATGGCGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGTGGAGTTTGAAAGGTTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCAGAGAGGATTGTGGATTTTTGCATGAGAGACAACGGTGTCGACGACGACCAAAATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTAGTAAGAAAGCGCGTGAGGTGCGTTTTTTTTAA

Protein sequence

MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTVRSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQNDRLWKMGGACSSKKAREVRFF
Homology
BLAST of Lag0030904 vs. NCBI nr
Match: XP_038887072.1 (uncharacterized protein At1g66480-like [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-70
Identity = 155/205 (75.61%), Postives = 170/205 (82.93%), Query Frame = 0

Query: 1   MGNSMG-RGS-RRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLR 60
           MGNSMG RGS RRRKRTTKVMKINGE  KIT PTTA +V  H+PNH LYESQS++QFGLR
Sbjct: 1   MGNSMGIRGSIRRRKRTTKVMKINGEAFKITLPTTAYEVTIHHPNHLLYESQSLEQFGLR 60

Query: 61  AKPLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQ 120
           AKPLDPHHQLKPKTLYFLLQLP+L G+H PL+RV SD+ LSASDRLECL+LSRRSVSDLQ
Sbjct: 61  AKPLDPHHQLKPKTLYFLLQLPTLLGDHCPLRRVCSDLHLSASDRLECLLLSRRSVSDLQ 120

Query: 121 TVRSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFC--MRDNGVD 180
           TVR +   +S  GGA  P+QVKFRLPRVEFERL KECK+KVEA ERIVDFC   RDNG D
Sbjct: 121 TVRFDPQRLSTDGGAAKPVQVKFRLPRVEFERLMKECKNKVEATERIVDFCGRSRDNG-D 180

Query: 181 DDQNDRLW-KMGGACSSKKAREVRF 201
             Q+D L+ KMG ACS  KAREV F
Sbjct: 181 GGQDDELFGKMGDACSG-KAREVCF 203

BLAST of Lag0030904 vs. NCBI nr
Match: XP_023524596.1 (uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-63
Identity = 137/200 (68.50%), Postives = 151/200 (75.50%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN+MGRGSRR KRT KVMKINGET KI TPTTASQV +H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PLDPHHQLKPKTLYFLL LP LPG+HRPL RVRSD+  SASDRLECLMLSRRS+SDLQ+ 
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQN 180
           R +   +S       P+Q+K R+PR EFERL KE KSKVEA ERIVD             
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVD------------- 180

Query: 181 DRLWKMGGACSSKKAREVRF 201
             LWK GG CS  +AREVRF
Sbjct: 181 --LWKTGGMCSG-QAREVRF 184

BLAST of Lag0030904 vs. NCBI nr
Match: KAE8650631.1 (hypothetical protein Csa_011666, partial [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-62
Identity = 131/194 (67.53%), Postives = 155/194 (79.90%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN++GRGSRR+KRTTKVMKINGETIKIT PTTA +V SHYP+H LYES+S+K FGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDI-RLSASDRLECLMLSRRSVSDLQT 120
           PLDPH  L+PKTLYFLLQLP+LP +H  L+R  SD+  LSASDRLECL+LSRRS+SDLQT
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 VRSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFC--MRDNGVDD 180
           +R +    S   GA  P+QVKF+LPR EFERL KECK+KVE  +RIVD+C   RDN   +
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

Query: 181 DQNDRLWKMGGACS 192
             ++  WKMGGA S
Sbjct: 181 QDDELFWKMGGAYS 194

BLAST of Lag0030904 vs. NCBI nr
Match: XP_022998216.1 (uncharacterized protein At1g66480-like [Cucurbita maxima])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 135/199 (67.84%), Postives = 149/199 (74.87%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN+MGRGSRR KRT KVMKINGET KI TPTTA QV +H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PLDPHHQLKPKTLYFLL LP LPG+HRPL RVRSD+  SASDRLECLMLSRRS+SDLQ+ 
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQN 180
           R +   +S       P+Q+K R+PR EFERL KE KSKVEAAERIVD             
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------- 180

Query: 181 DRLWKMGGACSSKKAREVR 200
             LWK GG CS  +ARE R
Sbjct: 181 --LWKTGGMCSG-QAREKR 183

BLAST of Lag0030904 vs. NCBI nr
Match: KAG6607003.1 (hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61
Identity = 136/199 (68.34%), Postives = 149/199 (74.87%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN+MG GSRR KRT KVMKINGET KI TPTTA QV +H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PLDPHHQLKPKTLYFLL LP LPG+HRPL RVRSD+  SASDRLECLMLSRRSVSDLQ+ 
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQN 180
           R +   +S       P+Q+K R+PR EFERL KE KSKVEAAERIVD             
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------- 180

Query: 181 DRLWKMGGACSSKKAREVR 200
             LWK GG CS  +AREVR
Sbjct: 181 --LWKTGGMCSG-QAREVR 183

BLAST of Lag0030904 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGNS+   + +RKR  KVMKI+GET +I TP TA +V + YP + L +SQ++K FG+R+K
Sbjct: 1   MGNSI---TVKRKR-AKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLP--------GNHRPLQRVRSDIRLSASDRLECLMLSRR 120
           PL+P+  LKPK  YFL++LP LP         N  P +RV S I + A +RL+ LMLSRR
Sbjct: 61  PLEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRR 120

Query: 121 SVSDLQTVRSNFMEVSDGGGAVVP------MQVKFRLPRVEFERLTKECKSKVEA-AERI 175
           +VSD+   R      SDGG    P        V+ RLPR +  +L +E  +   A AE+I
Sbjct: 121 TVSDVTIGR------SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKI 179

BLAST of Lag0030904 vs. ExPASy TrEMBL
Match: A0A0A0L7W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.0e-63
Identity = 132/196 (67.35%), Postives = 156/196 (79.59%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN++GRGSRR+KRTTKVMKINGETIKIT PTTA +V SHYP+H LYES+S+K FGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDI-RLSASDRLECLMLSRRSVSDLQT 120
           PLDPH  L+PKTLYFLLQLP+LP +H  L+R  SD+  LSASDRLECL+LSRRS+SDLQT
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 VRSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFC--MRDNGVDD 180
           +R +    S   GA  P+QVKF+LPR EFERL KECK+KVE  +RIVD+C   RDN   +
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

Query: 181 DQNDRLWKMGGACSSK 194
             ++  WKMGGA S K
Sbjct: 181 QDDELFWKMGGAYSGK 196

BLAST of Lag0030904 vs. ExPASy TrEMBL
Match: A0A6J1K9N3 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111492930 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.5e-62
Identity = 135/199 (67.84%), Postives = 149/199 (74.87%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN+MGRGSRR KRT KVMKINGET KI TPTTA QV +H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PLDPHHQLKPKTLYFLL LP LPG+HRPL RVRSD+  SASDRLECLMLSRRS+SDLQ+ 
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQN 180
           R +   +S       P+Q+K R+PR EFERL KE KSKVEAAERIVD             
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------- 180

Query: 181 DRLWKMGGACSSKKAREVR 200
             LWK GG CS  +ARE R
Sbjct: 181 --LWKTGGMCSG-QAREKR 183

BLAST of Lag0030904 vs. ExPASy TrEMBL
Match: A0A6J1G9F9 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111452165 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.7e-61
Identity = 135/199 (67.84%), Postives = 148/199 (74.37%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGN+MG GSRR KRT KVMKINGET KI TPTTA QV +H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PLDPHHQLKPKTLYFLL LP LPG+HRPL RVRSD+  SASDRLECLMLSRRSVSDLQ+ 
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNGVDDDQN 180
           R +   +S       P+Q+K R+PR EFERL KE KSKVEAAERIVD             
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------- 180

Query: 181 DRLWKMGGACSSKKAREVR 200
             LWK GG CS  +ARE R
Sbjct: 181 --LWKTGGMCSG-QAREKR 183

BLAST of Lag0030904 vs. ExPASy TrEMBL
Match: A0A5A7V2M4 (Putative Encodes a protein whose expression is responsive to nematode infection OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00470 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.8e-50
Identity = 109/157 (69.43%), Postives = 124/157 (78.98%), Query Frame = 0

Query: 19  MKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQ 78
           MKINGET KIT PTTA +V SHYPNH LYES+S+ QFGLRAKPLDPH QL+PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTVRSNFMEVSDGGGAVVPMQ 138
           LP+L G  R L+R  SD+ LSASDRLECL+LSRRSVSDLQT+R +    S   GA   +Q
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSSIHDGAAKSVQ 120

Query: 139 VKFRLPRVEFERLTKECKSKVEAAERIVDFC--MRDN 174
           VKF+LPR EFERL KECK+ VE  ++IVDFC   RDN
Sbjct: 121 VKFQLPRAEFERLMKECKNNVEVTKKIVDFCAKSRDN 157

BLAST of Lag0030904 vs. ExPASy TrEMBL
Match: A0A1S3C4W5 (uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.4e-49
Identity = 106/153 (69.28%), Postives = 121/153 (79.08%), Query Frame = 0

Query: 19  MKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQ 78
           MKINGET KIT PTTA +V SHYPNH LYES+S+ QFGLRAKPLDPH QL+PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTVRSNFMEVSDGGGAVVPMQ 138
           LP+L G  R L+R  SD+ LSASDRLECL+LSRRSVSDLQT+R +        GA   +Q
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSVQ 120

Query: 139 VKFRLPRVEFERLTKECKSKVEAAERIVDFCMR 172
           VKF+LPR EFERL KECK+ VE  ++IVDFC R
Sbjct: 121 VKFQLPRAEFERLMKECKNNVEVTKKIVDFCAR 153

BLAST of Lag0030904 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGNS+G      K+TTKVMKI+GET K+ TP TA +V+  +P H L +S+S+K +G RAK
Sbjct: 1   MGNSLG-----GKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PL+   +L+ K LYF+++    P    P +RVRS I +SA +RLE LML+RRS SDL  +
Sbjct: 61  PLEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSIL 120

Query: 121 R-SNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCM 171
           +        +  GAV   +VK R+P+ E E+L KE  ++ EA ++I    M
Sbjct: 121 KPPGGWTTEEEEGAV--RRVKVRIPKAELEKLVKEGATEAEATQKIAALFM 160

BLAST of Lag0030904 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-29
Identity = 72/170 (42.35%), Postives = 106/170 (62.35%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGNS+G      K+T  +M INGE+ K+ TP  A  V+  +P H L ES+++K+ G+RAK
Sbjct: 1   MGNSLG-----TKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGNHRPLQRVRSDIRLSASDRLECLMLSRRSVSDLQTV 120
           PL+PH  L+ K +YF+++LP       P +RVRS I++SA +RLE L LSRRS SDL  +
Sbjct: 61  PLEPHQNLESKRIYFMVELPRTWKERTP-RRVRSGIQMSAKERLENLKLSRRSSSDLSVM 120

Query: 121 RSNFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCM 171
           +    EV+D    V    VK +LP+ + E+L KE +S  + + +I   C+
Sbjct: 121 KKK-TEVNDEEREV--SSVKLKLPKWKIEKLRKESESGSDFSNKITQLCL 161

BLAST of Lag0030904 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = 0

Query: 1   MGNSMGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAK 60
           MGNS+   + +RKR  KVMKI+GET +I TP TA +V + YP + L +SQ++K FG+R+K
Sbjct: 1   MGNSI---TVKRKR-AKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLP--------GNHRPLQRVRSDIRLSASDRLECLMLSRR 120
           PL+P+  LKPK  YFL++LP LP         N  P +RV S I + A +RL+ LMLSRR
Sbjct: 61  PLEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRR 120

Query: 121 SVSDLQTVRSNFMEVSDGGGAVVP------MQVKFRLPRVEFERLTKECKSKVEA-AERI 175
           +VSD+   R      SDGG    P        V+ RLPR +  +L +E  +   A AE+I
Sbjct: 121 TVSDVTIGR------SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKI 179

BLAST of Lag0030904 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 5.3e-25
Identity = 69/172 (40.12%), Postives = 100/172 (58.14%), Query Frame = 0

Query: 5   MGRGSRRRKRTTKVMKINGETIKITTPTTASQVISHYPNHSLYESQSIKQFGLRAKPLDP 64
           MG     R+   KVMKI+G+  ++ TP TAS     YP   L +S+++K+ G+RAKPL+P
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 65  HHQLKPKTLYFLLQLPSL-PGNHRPLQRVRS-DIRLSASDRLECLMLSRRSVSDLQTVRS 124
           +  LKP   YFL+ LP +   N  P +RV S +I + A +RLE LMLSRR+VSD+   RS
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARS 120

Query: 125 NFMEVSDGGGAVVPMQVKFRLPRVEFERLTKECKSKVEAAERIVDFCMRDNG 175
              +V   G  +   +V+ RLPR +  +L +E     E A +I+   M  +G
Sbjct: 121 ---DVVGDGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSG 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887072.15.1e-7075.61uncharacterized protein At1g66480-like [Benincasa hispida][more]
XP_023524596.12.7e-6368.50uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo][more]
KAE8650631.13.9e-6267.53hypothetical protein Csa_011666, partial [Cucumis sativus][more]
XP_022998216.11.1e-6167.84uncharacterized protein At1g66480-like [Cucurbita maxima][more]
KAG6607003.11.9e-6168.34hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Q6NLC81.5e-2743.39Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P... [more]
Match NameE-valueIdentityDescription
A0A0A0L7W05.0e-6367.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1[more]
A0A6J1K9N35.5e-6267.84uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC1114929... [more]
A0A6J1G9F94.7e-6167.84uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A5A7V2M44.8e-5069.43Putative Encodes a protein whose expression is responsive to nematode infection ... [more]
A0A1S3C4W51.4e-4969.28uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G01340.11.6e-2944.44Encodes a protein whose expression is responsive to nematode infection. [more]
AT1G71015.14.6e-2942.35unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G66480.11.0e-2843.39plastid movement impaired 2 [more]
AT5G37840.15.3e-2540.12BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..113
e-value: 2.8E-18
score: 67.0
NoneNo IPR availablePANTHERPTHR33148:SF6PLASTID MOVEMENT IMPAIRED PROTEINcoord: 1..178
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0030904.1Lag0030904.1mRNA