Lag0030885 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030885
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr11: 2466042 .. 2466777 (-)
RNA-Seq Expression	Lag0030885
Synteny	Lag0030885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTTGGATGATATTGCTAGCTCTCTCAGAAAATCGCTAAAAACTGATCTCCAGCAAACTGCTCTTTTAGAAGCTTGCTATTGGAATCAGCGTTGCAAAAAGCTCTGGTTAAATGACGGGGACGAAAACTCAGCATTTTTTCATAAAGTTTGCACTGCCCGCCGTCGAAGGAATCAAATTCATGAGCTCATTTCCAAAGAGGGAGTAGCATTGTCTCTGATAATATGATGGAATATGAAGTGATCAATCATTTCTCGGCTATCTATGAGGCTAATCAGGAAACTGAATGGATTGTGACTAATCTTGACTGGGCTCCCATTAACATTGATTTGATCAGTACTTGATATCTCCTTTTAGAGAGGAAGAAGTTTTTGACTGCATCAAGTCTATTGGTCATAATAAGGCTCCGGGTCCTGATGGCTTCACTATCGAATTTATCAAGAAATTTTGGAGCATTCTAAAGTCATCTATCATGTCTGTTTTCCATGATTTTTTTCGTAGTAAGACTGTCAATCGGGTTGTAAACCACACAAATATTGCGCTCATCCCCAAAAAGTCTATGGCTGGCCATATTTCAGATTTCCGCCCAATTAGCCTTACCACTTCTCTCTATAAAATTCTTGCCAAGGTCTTGGCGGAGCGTTTGAAGCCCACTCTAGAAGATACAATCAGCTTAAATCAATCAGCCTTTATGTTCGCAAAAGACAAATCTCTGATGCTATTTTGTTAG

mRNA sequence

ATGGGTTCTTTGGATGATATTGCTAGCTCTCTCAGAAAATCGCTAAAAACTGATCTCCAGCAAACTGCTCTTTTAGAAGCTTGCTATTGGAATCAGCGTTGCAAAAAGCTCTGGTTAAATGACGGGGACGAAAACTCAGCATTTTTTCATAAAGTTTGCACTGCCCGCCGTCGAAGGAATCAAATTCATGAGCTCATTTCCAAAGAGGGAGTAGCATTAGAGGAAGAAGTTTTTGACTGCATCAAGTCTATTGGTCATAATAAGGCTCCGGGTCCTGATGGCTTCACTATCGAATTTATCAAGAAATTTTGGAGCATTCTAAAGTCATCTATCATGTCTGTTTTCCATGATTTTTTTCGTAGTAAGACTGTCAATCGGGTTGTAAACCACACAAATATTGCGCTCATCCCCAAAAAGTCTATGGCTGGCCATATTTCAGATTTCCGCCCAATTAGCCTTACCACTTCTCTCTATAAAATTCTTGCCAAGGTCTTGGCGGAGCGTTTGAAGCCCACTCTAGAAGATACAATCAGCTTAAATCAATCAGCCTTTATGTTCGCAAAAGACAAATCTCTGATGCTATTTTGTTAG

Coding sequence (CDS)

ATGGGTTCTTTGGATGATATTGCTAGCTCTCTCAGAAAATCGCTAAAAACTGATCTCCAGCAAACTGCTCTTTTAGAAGCTTGCTATTGGAATCAGCGTTGCAAAAAGCTCTGGTTAAATGACGGGGACGAAAACTCAGCATTTTTTCATAAAGTTTGCACTGCCCGCCGTCGAAGGAATCAAATTCATGAGCTCATTTCCAAAGAGGGAGTAGCATTAGAGGAAGAAGTTTTTGACTGCATCAAGTCTATTGGTCATAATAAGGCTCCGGGTCCTGATGGCTTCACTATCGAATTTATCAAGAAATTTTGGAGCATTCTAAAGTCATCTATCATGTCTGTTTTCCATGATTTTTTTCGTAGTAAGACTGTCAATCGGGTTGTAAACCACACAAATATTGCGCTCATCCCCAAAAAGTCTATGGCTGGCCATATTTCAGATTTCCGCCCAATTAGCCTTACCACTTCTCTCTATAAAATTCTTGCCAAGGTCTTGGCGGAGCGTTTGAAGCCCACTCTAGAAGATACAATCAGCTTAAATCAATCAGCCTTTATGTTCGCAAAAGACAAATCTCTGATGCTATTTTGTTAG

Protein sequence

MGSLDDIASSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISKEGVALEEEVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPKKSMAGHISDFRPISLTTSLYKILAKVLAERLKPTLEDTISLNQSAFMFAKDKSLMLFC

Homology

[Close]

BLAST of Lag0030885 vs. NCBI nr
Match: KAA0045262.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK28688.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-43
Identity = 96/202 (47.52%), Postives = 124/202 (61.39%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK DL   +L E+ +W QR KKLWL +GDENS+FFH++C++R++RN IHE+  +
Sbjct: 682 SNRRLALKIDLSDLSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRNFIHEIQDE 741

Query: 69  EGVA-------------------------LEEEVFDCIKSIGHNKAPGPDGFTIEFIKKF 128
           EG                           LEEE+   I S    KAPGPDGF I F K F
Sbjct: 742 EGSTQNTNNNISTAFIKYFSKWPHLCAPFLEEEIKGVINSFDGKKAPGPDGFPISFFKSF 801

Query: 129 WSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPKKSMAGHISDFRPISLTTSLYKILAK 186
           W +LK  I+ +F DFF    +N+ +N+T IALI KK       DFRPISLTTS+YK++AK
Sbjct: 802 WHLLKEDILDIFKDFFEKGVINKNMNNTYIALIAKKKDYSQPKDFRPISLTTSIYKVIAK 861

[Close]

BLAST of Lag0030885 vs. NCBI nr
Match: TYK03140.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-41
Identity = 91/194 (46.91%), Postives = 125/194 (64.43%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK DL + +L E+ +W QR KKLWL +GDENS+FFH++C++R++R+ IHE+  +
Sbjct: 253 SNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDE 312

Query: 69  E-----------------GVALEEEVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSI 128
           E                    LE+E+   I S+   K PGPDGF I F K +W +LK  I
Sbjct: 313 EDNLDWNLIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGPDGFPISFFKSYWYLLKEDI 372

Query: 129 MSVFHDFFRSKTVNRVVNHTNIALIPKKSMAGHISDFRPISLTTSLYKILAKVLAERLKP 186
           M +F DF+    +N+ +N+T IALIPKK    +  DFRPIS TTS+YKI+AK L+ RLK 
Sbjct: 373 MDIFKDFYDKGVINKNMNNTYIALIPKKKDYSNPKDFRPISQTTSIYKIIAKTLSNRLKT 432

[Close]

BLAST of Lag0030885 vs. NCBI nr
Match: KAA0058104.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-41
Identity = 98/227 (43.17%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK +L   +L E+ +W QR KKLW+ +GDEN AFFH++C++R++RN IHE+ ++
Sbjct: 181 SNRRLALKAELNDLSLKESQFWFQRAKKLWIKEGDENYAFFHRICSSRQKRNLIHEIQNE 240

Query: 69  EGVA--------------------------------------------------LEEEVF 128
           EG                                                    LEEE+ 
Sbjct: 241 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFLEEEIK 300

Query: 129 DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
             IKS   NKAPGPDGF I F K +W +LK  IM +F DFF    +N+ +N+T IALI K
Sbjct: 301 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDIMDIFKDFFEKGVINKNMNNTYIALIAK 360

[Close]

BLAST of Lag0030885 vs. NCBI nr
Match: KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 98/227 (43.17%), Postives = 128/227 (56.39%), Query Frame = 0


Query: 9    SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
            S+ R +LK +L   +L E+ +W QR KKLWL +GDENSAFFH++C++R++RN IHE+  +
Sbjct: 965  SNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDE 1024

Query: 69   EG--------VAL------------------------------------------EEEVF 128
            EG        ++L                                          EEE+ 
Sbjct: 1025 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIK 1084

Query: 129  DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
              IKS   NKAPGPDGF I F K +W +LK  I+ +F DFF    +N+ +N+T IALI K
Sbjct: 1085 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMNNTYIALIEK 1144

[Close]

BLAST of Lag0030885 vs. NCBI nr
Match: TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 98/227 (43.17%), Postives = 128/227 (56.39%), Query Frame = 0


Query: 9    SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
            S+ R +LK +L   +L E+ +W QR KKLWL +GDENSAFFH++C++R++RN IHE+  +
Sbjct: 965  SNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDE 1024

Query: 69   EG--------VAL------------------------------------------EEEVF 128
            EG        ++L                                          EEE+ 
Sbjct: 1025 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIK 1084

Query: 129  DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
              IKS   NKAPGPDGF I F K +W +LK  I+ +F DFF    +N+ +N+T IALI K
Sbjct: 1085 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMNNTYIALIEK 1144

[Close]

BLAST of Lag0030885 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.4e-12
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 75  EEVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIA 134
           +E+   ++ + HNK+PG DG TIEF + FW  L      V  + F+   +        ++
Sbjct: 452 DELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLS 511

Query: 135 LIPKKSMAGHISDFRPISLTTSLYKILAKVLAERLKPTLEDTISLNQS 183
           L+PKK     I ++RP+SL ++ YKI+AK ++ RLK  L + I  +QS
Sbjct: 512 LLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQS 559

[Close]

BLAST of Lag0030885 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 8.6e-09
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 39  LNDGDENSAFFHKVCTARRRRNQIHELISKEGVALEEEVFDCIKSIGHNKAPGPDGFTIE 98
           L + DE   F  +    +  ++Q+  L S       +E+   I S+   K+PGPDGF+ E
Sbjct: 430 LENLDEMDKFLDRYQVPKLNQDQVDHLNSP---ISPKEIEAVINSLPTKKSPGPDGFSAE 489

Query: 99  FIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK-KSMAGHISDFRPISLTTSL 158
           F + F   L   +  +FH      T+        I LIPK +     I +FRPISL    
Sbjct: 490 FYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNID 549

Query: 159 YKILAKVLAERLKPTLEDTISLNQSAFM 186
            KIL K+LA R++  ++  I  +Q  F+
Sbjct: 550 AKILNKILANRIQEHIKAIIHPDQVGFI 574

[Close]

BLAST of Lag0030885 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.6e-08
Identity = 35/111 (31.53%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 76  EVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIAL 135
           E+   I+++   K+PGPDGFT EF + F   L   ++++F +  +   +       NI L
Sbjct: 456 EIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITL 515

Query: 136 IPKKSM-AGHISDFRPISLTTSLYKILAKVLAERLKPTLEDTISLNQSAFM 186
           IPK         ++RPISL     KIL K+L  R++  ++  I  +Q  F+
Sbjct: 516 IPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFI 566

[Close]

BLAST of Lag0030885 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 36/111 (32.43%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 76  EVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIAL 135
           E+   I S+   K+PGPDGFT EF +++   L   ++ +F    +   +       +I L
Sbjct: 457 EIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIIL 516

Query: 136 IPKKSM-AGHISDFRPISLTTSLYKILAKVLAERLKPTLEDTISLNQSAFM 186
           IPK         +FRPISL     KIL K+LA R++  ++  I  +Q  F+
Sbjct: 517 IPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFI 567

[Close]

BLAST of Lag0030885 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.3e-43
Identity = 96/202 (47.52%), Postives = 124/202 (61.39%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK DL   +L E+ +W QR KKLWL +GDENS+FFH++C++R++RN IHE+  +
Sbjct: 682 SNRRLALKIDLSDLSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRNFIHEIQDE 741

Query: 69  EGVA-------------------------LEEEVFDCIKSIGHNKAPGPDGFTIEFIKKF 128
           EG                           LEEE+   I S    KAPGPDGF I F K F
Sbjct: 742 EGSTQNTNNNISTAFIKYFSKWPHLCAPFLEEEIKGVINSFDGKKAPGPDGFPISFFKSF 801

Query: 129 WSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPKKSMAGHISDFRPISLTTSLYKILAK 186
           W +LK  I+ +F DFF    +N+ +N+T IALI KK       DFRPISLTTS+YK++AK
Sbjct: 802 WHLLKEDILDIFKDFFEKGVINKNMNNTYIALIAKKKDYSQPKDFRPISLTTSIYKVIAK 861

[Close]

BLAST of Lag0030885 vs. ExPASy TrEMBL
Match: A0A5D3BVM7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00150 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 8.0e-42
Identity = 91/194 (46.91%), Postives = 125/194 (64.43%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK DL + +L E+ +W QR KKLWL +GDENS+FFH++C++R++R+ IHE+  +
Sbjct: 253 SNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDE 312

Query: 69  E-----------------GVALEEEVFDCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSI 128
           E                    LE+E+   I S+   K PGPDGF I F K +W +LK  I
Sbjct: 313 EDNLDWNLIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGPDGFPISFFKSYWYLLKEDI 372

Query: 129 MSVFHDFFRSKTVNRVVNHTNIALIPKKSMAGHISDFRPISLTTSLYKILAKVLAERLKP 186
           M +F DF+    +N+ +N+T IALIPKK    +  DFRPIS TTS+YKI+AK L+ RLK 
Sbjct: 373 MDIFKDFYDKGVINKNMNNTYIALIPKKKDYSNPKDFRPISQTTSIYKIIAKTLSNRLKT 432

[Close]

BLAST of Lag0030885 vs. ExPASy TrEMBL
Match: A0A5A7USG2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004120 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41
Identity = 98/227 (43.17%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 9   SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
           S+ R +LK +L   +L E+ +W QR KKLW+ +GDEN AFFH++C++R++RN IHE+ ++
Sbjct: 181 SNRRLALKAELNDLSLKESQFWFQRAKKLWIKEGDENYAFFHRICSSRQKRNLIHEIQNE 240

Query: 69  EGVA--------------------------------------------------LEEEVF 128
           EG                                                    LEEE+ 
Sbjct: 241 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFLEEEIK 300

Query: 129 DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
             IKS   NKAPGPDGF I F K +W +LK  IM +F DFF    +N+ +N+T IALI K
Sbjct: 301 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDIMDIFKDFFEKGVINKNMNNTYIALIAK 360

[Close]

BLAST of Lag0030885 vs. ExPASy TrEMBL
Match: A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.2e-41
Identity = 98/227 (43.17%), Postives = 128/227 (56.39%), Query Frame = 0


Query: 9    SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
            S+ R +LK +L   +L E+ +W QR KKLWL +GDENSAFFH++C++R++RN IHE+  +
Sbjct: 965  SNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDE 1024

Query: 69   EG--------VAL------------------------------------------EEEVF 128
            EG        ++L                                          EEE+ 
Sbjct: 1025 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIK 1084

Query: 129  DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
              IKS   NKAPGPDGF I F K +W +LK  I+ +F DFF    +N+ +N+T IALI K
Sbjct: 1085 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMNNTYIALIEK 1144

[Close]

BLAST of Lag0030885 vs. ExPASy TrEMBL
Match: A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.2e-41
Identity = 98/227 (43.17%), Postives = 128/227 (56.39%), Query Frame = 0


Query: 9    SSLRKSLKTDLQQTALLEACYWNQRCKKLWLNDGDENSAFFHKVCTARRRRNQIHELISK 68
            S+ R +LK +L   +L E+ +W QR KKLWL +GDENSAFFH++C++R++RN IHE+  +
Sbjct: 965  SNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDE 1024

Query: 69   EG--------VAL------------------------------------------EEEVF 128
            EG        ++L                                          EEE+ 
Sbjct: 1025 EGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIK 1084

Query: 129  DCIKSIGHNKAPGPDGFTIEFIKKFWSILKSSIMSVFHDFFRSKTVNRVVNHTNIALIPK 186
              IKS   NKAPGPDGF I F K +W +LK  I+ +F DFF    +N+ +N+T IALI K
Sbjct: 1085 GVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMNNTYIALIEK 1144

The following BLAST results are available for this feature:

BLAST of Lag0030885 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045262.1	8.8e-43	47.52	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK286...	[more]
TYK03140.1	1.7e-41	46.91	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0058104.1	2.8e-41	43.17	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0039309.1	1.1e-40	43.17	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK00493.1	1.1e-40	43.17	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0030885 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	6.4e-12	35.19	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	8.6e-09	31.08	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P08548	9.6e-08	31.53	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
O00370	1.6e-07	32.43	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]

BLAST of Lag0030885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZ07	4.3e-43	47.52	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BVM7	8.0e-42	46.91	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7USG2	1.4e-41	43.17	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TDG1	5.2e-41	43.17	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BL61	5.2e-41	43.17	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 136..185 e-value: 1.7E-7 score: 31.0
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 9..68 coord: 73..185
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 73..185
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030885.1	Lag0030885.1	mRNA