Lag0030786 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030786
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	NADH-dependent glutamate synthase 1 isoform 1
Location	chr11: 1354793 .. 1357729 (+)
RNA-Seq Expression	Lag0030786
Synteny	Lag0030786

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGGATTAAGTTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGGTATCTTTTCCTTTACACTCTTCAATTTTTTCATTTGTTCTTTACTTTTTTGTTTGTTTCTACTGGTTTTTGAGTTGGGATTTTACTATCATTCTCTGAATCTTTTGAATCTTGTGGATGAGTTCTTGGCTTCTGTGGCAGATTGATTGTTTGTTTGGTTGGACCGAATCTCAGAATTTCACTGGGTTTAGAAACTGATGCAAAGTTTTGTTCCTGTGGAAGATTTTGTTATCTGTTTAGTTTAGAACTGACTCAATTTTTTGTTCTTGTGGAAGATTCTTTTGTCTGTTTGGTTGTGTAGAAGCAGAAACTTACTGGGCTAGAAACTGGGTCAGTTTTGGGTTCATGTGGAAGATTCTTTTTGTTTTCTGTTTGGTCTGTTTGGTTGTGTAGAAACATAAACTCATTGGGTTAGAAACTGAGTCAATTTCTCACTGGTTCTGAAGCTGATGCAAAATTTTGTTCCTGTGGAAGATTTTTGTATGTTTGGTTGAGTACAAATTGAAACTTGCTGGGTTTAGCTATTGAGTCAATTATTTATCCTTGTGGAAGATTTCTTTTGTCTGTTTGGTTGTATAGAAACAGAAACTCTCTGGGTTAGAGAATGAGTCAATTTTCTTGTTCTTATGGAAGATCTTTTGTGTTCCTGTGGAAGAGTTTTTTTTGTCTGTTTGGTTGTTTTGTTCAGAAACAGAAACTCGCTGGGTGTAGAAGTGAGTCAACGTTTTTAATCTTGTGGAAGATTTTTTGTCTGTTTGGCTGTATGGAAACAGAAACCTAAGAGCACCGACATTTTAGTTCGGATAACATGTTTGTGTCCGACACATCTCAAATACTCTAACGTTTCGACGCTTGTTGGACATGTTATTAGGACAATGATGTGTGACACTAACTGTACTAAGTTAATACAAGTACGAGTCCAATATTGGTTAGAAATATATCTATTCTTCCTAAAATGTTAAAGACATCGGAACCTCGACATGTCTTCACAATGATATGACACTTATATACCATGGATCTCTCTCTTTCTTCCGTAGCCAATGTGTGACTTTTATTTGCACCTAATAAATAGACATAAATAGTAATTTAGGACAAAAATACTAAATTTTGAGAGCAAAATACATCAGACTCGTTCTTGTTTGAATTTCTCTTTGGTATGTCTCTGTATCCTAGATTTTTAAGAACGACAAGTCACCATGTTTGTGTTGTATGTTGTGTCTCATTCGTATTTGTGCTTTTAGACTGAAACTCAATTTGGGTAAGGTTCAGTTTGCAATGGAAGTAGAAATTTAAAAGTTTCTGGCTTAGGTGACTCTGCAATCTTCCTTTCACTTGTCCAATATGTGTTATTGGAAATCATCATTAGACTCTCCTAACTCCCTCCCTTATGACTATTAGTTGGGGAAAGGTTTGAGAAGCCAATTTGGATGCCTTAAGCCCCGTTTGATAACCATTTGGTTTTTGAAAATTAAGTTTGTTTTCCTTCAATTTCCTTGCCATGGTTTTCATCGTTGTTAAGGGTACATTTGAGTTCCTAGCCAAATTCAAAAAACAAAAACAAGCTTTTGAAAACTATTTTTTTTTAGCTTTCAAAACTTAGCTTGGTTTTTGAAAACATGAAATAATGTGTATAACAAAACTAAGAAACTTAATGGTTGAAGTAGTGTTTTTAAGCTTAATTTTCAAAAACCAAAAACCAAAAATCAAATGGTTATCAAACAGGGCCTTAACGAGAAAATTCGTCACCCAACTAAAATTCATGTGAATCGATTAGGACAGCAAACCAATCGCTATCTGTGTGTCTAAATCTATATTGTTTGAATTTGGATTTTACCAAAATGGTATGATTGTTTTTACGTTACACAAGATTTTTTTCACATCTAATCAAGACTATGTTTGCAACCCCATCACTTTCAGCTTTAATTTATGAACCTTCTTAATTCTCATCGAGAAATACTTTGAACTGATTGAATTCAACAATTGCGAGATTGGGGATCAAACCATTAACCTTTGAGATGGTATATGTTCTAGTAGTGTCATATCTTTTTTAATAAAAATGGCATGACAAAAGTGATTCTGGTCATTCCTAAGTCACTCCCAAACATACCCTTATCCAATGAACTATGTTTGGATTGACGAAATATGGTTGTCTACCCTACTTTTTTTTTTTTAGTACAGAATTTATCCTACTTGTGCTTGCAATTGAATCAGTTTCGATTAGATTACCTTGCATTTAACTCTAGTGGTGATGCTTCGTCACTATTTTCGATGTTTAGTCATGATTTTCGAGTTTTTCCCAACTTACCTGCAATCGTTTTCACAAGTTCATGTGTAAGTTTTTTCAAAAGCTTTATCATTACAGGTTCTAACTTGTTTTGCTAGCCTGACAAGTCTTACAATTTCCTCTTTTAGGTTCTGCTTTCCAGGCTCAGCACAACCCCTCAACAGATAACGTTGGTTACTATGCACTTTCAGGTTCCAATGTGCCTGCGCCACCCCAAAATACAGCCGTGGGGGGCAAAGCAACGCTCCAGCCAAAGCGTACGCCTGTCTCGGACAGAGAGATAGAGGCCATACTGGTAAGCAAAATAGTCTCTTTTACATCAATATGATACCTGCATTTACAAAATTTATCTCATGAGTTAGCATTGCGTAATACGATGGAAGCGAAGAGGGAATGAACGACAGTGTTTAATATGAAGGACGGATTCGAGATACTTGATGTTTGTTCTGATATGCTGATTCTAGCTTTGTTCTTTTAACAATGCAGTTAGGTGGATGCTTTTGATCTTTTCCATCAGATGTCGTGGAACGATAGCGTAGTGATTGTTCGATATCTGGATCATTTGCCTTGTTAG

mRNA sequence

ATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGGATTAAGTTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGAAGCAGAAACTTACTGGGCTAGAAACTGGAAACAGAAACTCGCTGGGTGTAGAAGTTCTGCTTTCCAGGCTCAGCACAACCCCTCAACAGATAACGTTGGTTACTATGCACTTTCAGGTTCCAATGTGCCTGCGCCACCCCAAAATACAGCCGTGGGGGGCAAAGCAACGCTCCAGCCAAAGCGTACGCCTGTCTCGGACAGAGAGATAGAGGCCATACTGGTGGATGCTTTTGATCTTTTCCATCAGATGTCGTGGAACGATAGCGTAGTGATTGTTCGATATCTGGATCATTTGCCTTGTTAG

Coding sequence (CDS)

ATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGGATTAAGTTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGAAGCAGAAACTTACTGGGCTAGAAACTGGAAACAGAAACTCGCTGGGTGTAGAAGTTCTGCTTTCCAGGCTCAGCACAACCCCTCAACAGATAACGTTGGTTACTATGCACTTTCAGGTTCCAATGTGCCTGCGCCACCCCAAAATACAGCCGTGGGGGGCAAAGCAACGCTCCAGCCAAAGCGTACGCCTGTCTCGGACAGAGAGATAGAGGCCATACTGGTGGATGCTTTTGATCTTTTCCATCAGATGTCGTGGAACGATAGCGTAGTGATTGTTCGATATCTGGATCATTTGCCTTGTTAG

Protein sequence

MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPSTDNVGYYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILVDAFDLFHQMSWNDSVVIVRYLDHLPC

Homology

[Close]

BLAST of Lag0030786 vs. NCBI nr
Match: XP_022158039.1 (uncharacterized protein LOC111024619 [Momordica charantia])

HSP 1 Score: 135.2 bits (339), Expect = 4.0e-28
Identity = 74/102 (72.55%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPST-DNV 60
           MGVEGHVLKRIPRIKFPERHPKSSAS                   SAFQAQ+NPST  ++
Sbjct: 1   MGVEGHVLKRIPRIKFPERHPKSSAS------------------GSAFQAQNNPSTIKDI 60

Query: 61  GYYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILV 102
           GYYALSGS+VPAPPQNTAVGGKA+L PKRTPVSDREIEAIL+
Sbjct: 61  GYYALSGSDVPAPPQNTAVGGKASLLPKRTPVSDREIEAILL 84

[Close]

BLAST of Lag0030786 vs. NCBI nr
Match: XP_038874479.1 (uncharacterized protein LOC120067123 [Benincasa hispida])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27
Identity = 72/102 (70.59%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPSTD-NV 60
           MG+EGHVLKRIPRIKFPERHPKSSAS                   SA Q+QHNPSTD ++
Sbjct: 1   MGIEGHVLKRIPRIKFPERHPKSSAS------------------GSANQSQHNPSTDKDI 60

Query: 61  GYYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILV 102
           GYY LSGSNVPAPPQN AVGGKA+L PKRTPVSDREIEAIL+
Sbjct: 61  GYYTLSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAILL 84

[Close]

BLAST of Lag0030786 vs. NCBI nr
Match: KAG6605778.1 (hypothetical protein SDJN03_03095, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.7 bits (330), Expect = 4.4e-27
Identity = 70/101 (69.31%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPSTDNVG 60
           MGVEGH+LKRIPRIKFPERHPKSSAS                   S FQ+Q +PST+N+G
Sbjct: 1   MGVEGHLLKRIPRIKFPERHPKSSAS------------------GSPFQSQQSPSTENLG 60

Query: 61  YYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILV 102
           YYALSGSNVPAP Q+TAVGGKA+L PKRTPVSDREIEAIL+
Sbjct: 61  YYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILL 83

[Close]

BLAST of Lag0030786 vs. NCBI nr
Match: XP_004145930.2 (uncharacterized protein LOC101222729 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 7.5e-27
Identity = 70/101 (69.31%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPSTDNVG 60
           MGVEGHVLKRIPRIKFP+RHPKSS+S                   SA Q+QHNP  D +G
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSSSSS-----------------GSALQSQHNPDKD-IG 60

Query: 61  YYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILV 102
           YYALSGSNVPAPPQN AVGGKA+L PKRTPVSDREIEAIL+
Sbjct: 61  YYALSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAILL 83

[Close]

BLAST of Lag0030786 vs. NCBI nr
Match: XP_022995845.1 (uncharacterized protein LOC111491252 [Cucurbita maxima])

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-26
Identity = 69/101 (68.32%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MGVEGHVLKRIPRIKFPERHPKSSASEAETYWARNWKQKLAGCRSSAFQAQHNPSTDNVG 60
           MGVEGH+LKRIPRIKFPERHPKSSAS                   S+ Q+Q  PST+N+G
Sbjct: 1   MGVEGHLLKRIPRIKFPERHPKSSAS------------------GSSSQSQQRPSTENLG 60

Query: 61  YYALSGSNVPAPPQNTAVGGKATLQPKRTPVSDREIEAILV 102
           YYALSGSNVPAP Q+TAVGGKA+L PKRTPVSDREIEAIL+
Sbjct: 61  YYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILL 83

The following BLAST results are available for this feature:

BLAST of Lag0030786 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158039.1	4.0e-28	72.55	uncharacterized protein LOC111024619 [Momordica charantia]	[more]
XP_038874479.1	1.2e-27	70.59	uncharacterized protein LOC120067123 [Benincasa hispida]	[more]
KAG6605778.1	4.4e-27	69.31	hypothetical protein SDJN03_03095, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004145930.2	7.5e-27	69.31	uncharacterized protein LOC101222729 [Cucumis sativus]	[more]
XP_022995845.1	2.8e-26	68.32	uncharacterized protein LOC111491252 [Cucurbita maxima]	[more]

BLAST of Lag0030786 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35751	FAMILY NOT NAMED	coord: 4..102
None	No IPR available	PANTHER	PTHR35751:SF1	BNAA02G37040D PROTEIN	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030786.1	Lag0030786.1	mRNA