Lag0030753 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0030753
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr11: 1061443 .. 1064993 (+)
RNA-Seq ExpressionLag0030753
SyntenyLag0030753
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAGCATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCGACAACCGGTGATGTGAAGAATCTTCTCCAAAACTTTCCACAAAAAGAAAAAAGAGAACTTTGGACTTCCTACTGCATTGACGTAGAAGAAGTTGACAATCCTAAGAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAGAAAAGTCGATCTTCAACATTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGAGCAAAAAAAAAAAAAAAATTCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAATAAAAAAAAAAGGTTCTTCGATGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCTCCAAGGTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAATGTTCACGCAATTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTCCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTTGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGTTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTAA

mRNA sequence

ATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAGCATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCGACAACCGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGATGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCTCCAAGGTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCCTTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAATGTTCACGCAATTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCCTTCCTCACAGTTCAAAGGTCCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTTGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGTTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTAA

Coding sequence (CDS)

ATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAGCATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCGACAACCGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGATGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCTCCAAGGTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCCTTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAATGTTCACGCAATTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCCTTCCTCACAGTTCAAAGGTCCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTTGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGTTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTAA

Protein sequence

MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPRQPDLIKTMTKIRAFKCKSSLSQEPKLHDAPSPHELKRFFDAVPSLQVRGSLHCTLLRCSFSKFEGSSLYPAALFLLSKVEGPYIVRYCVVPSPSSKVLRCILLRCSFSKFEGSQLYDCYVVPPPSVKDLMWCVVALFPLLSSSMVLTQLRWSFFSPSSKVLTRSVAVPSFQGRRFSLAALQFFLPKFEGSRTSLQFLLPNSKVLTRFALQFLPPSSKVLTRFAVVPSPKFEGSHTLRCNSFLQVQSSFPPSSKVLTRFAAVPSSQFKGSHALRCSSFPQVRRFSRRFAAVPSSKFEGSHVASLQFLPPSLKVLTSLRFALRFVAVPSSKFEVPSSKFEGSHALRCSFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKAPLSTVPSSKFEGSHALRCYLPPSSKVLSRAAAAPSSKFEGSHALRCSSFFSRSKVLTRCVAVLSPQVRMFTQFAAVPSPKFEGSHTLRSAIPSPKFEGSHALRCSSFPPSLKVLTRFAAIPSSKFKVPSSQFKGPHALRCSSFPPSSKVLTSLRCSSFLQVRRFSRRFAAVPSSKFEGSHIASLRAALRCSSFLQVRRFSLASLQFLPPNSKVSKVLKRCDSLQFLPPSSKVLMRFVAPSSKFEGSLTRCCSSFLQVRRFPHALRSLLLQVRRRLSPLFLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKAFLSAAPSPSSKALLSTAPSPSSKALLSTVPSPSSKVLLSTPLFEGSPLRFSFSKFEGSPLLLFKCLAAVDVLVPLHLQMLAVDGVRFASS
Homology
[Close]
BLAST of Lag0030753 vs. NCBI nr
Match: KAA0050543.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-14
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 3   KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 55
           KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N  T+
Sbjct: 187 KVDDPNYCKYHRVISHPVEKCFVLKELILKLARENKIELDIDEVAQTNHVTV 238

[Close]
BLAST of Lag0030753 vs. NCBI nr
Match: XP_022159413.1 (uncharacterized protein LOC111025834 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-14
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 1   MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 55
           M KVDDPKYCKYHRVI HPVE+CFVLK+ IL LA+EGKIELD +E+AQSN A +
Sbjct: 292 MSKVDDPKYCKYHRVISHPVEKCFVLKERILNLAREGKIELDFNEIAQSNHAAV 345

[Close]
BLAST of Lag0030753 vs. NCBI nr
Match: KAA0058295.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-14
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 2   EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK 56
           EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Sbjct: 438 EKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIE 491

[Close]
BLAST of Lag0030753 vs. NCBI nr
Match: KAA0025376.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-14
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 2   EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK 56
           EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Sbjct: 123 EKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIE 176

[Close]
BLAST of Lag0030753 vs. NCBI nr
Match: TYK09793.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-14
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 2   EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK 56
           EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Sbjct: 258 EKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIE 311

[Close]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match: A0A5A7U3T4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001930 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.9e-15
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 3   KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 55
           KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N  T+
Sbjct: 187 KVDDPNYCKYHRVISHPVEKCFVLKELILKLARENKIELDIDEVAQTNHVTV 238

[Close]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match: A0A6J1DYQ8 (uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025834 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.7e-15
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 1   MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 55
           M KVDDPKYCKYHRVI HPVE+CFVLK+ IL LA+EGKIELD +E+AQSN A +
Sbjct: 292 MSKVDDPKYCKYHRVISHPVEKCFVLKERILNLAREGKIELDFNEIAQSNHAAV 345

[Close]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-14
Identity = 39/54 (72.22%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1   MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 55
           +EKVDDP YCKYHR+I HPVE+CFVLK+LILKLA+E KI+LD+DEVAQ+N   +
Sbjct: 162 VEKVDDPNYCKYHRIISHPVEKCFVLKELILKLARENKIKLDIDEVAQTNYVAV 215

[Close]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match: A0A5D3CD55 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00850 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-14
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 2   EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK 56
           EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Sbjct: 258 EKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIE 311

[Close]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match: A0A5A7SHQ6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00030 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-14
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 2   EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK 56
           EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Sbjct: 123 EKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIE 176

The following BLAST results are available for this feature:
BLAST of Lag0030753 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050543.11.2e-1478.85retrotransposon gag protein [Cucumis melo var. makuwa][more]
XP_022159413.11.6e-1475.93uncharacterized protein LOC111025834 [Momordica charantia][more]
KAA0058295.12.1e-1477.78ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0025376.12.1e-1477.78retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK09793.12.1e-1477.78ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Lag0030753 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3T45.9e-1578.85Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A6J1DYQ87.7e-1575.93uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5A7U9741.0e-1472.22Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3CD551.0e-1477.78Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7SHQ61.0e-1477.78Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of Lag0030753 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 776..796
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0030753.1Lag0030753.1mRNA