Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCAACTCGCTCAAGCATTGAAAGACATGGATCCGAAAGGTGTCCAGCTTGGGGCAGCTCCAAAATGCCAGTTTCCTGATGGGCACTTGGGAGCTGCAATAAACACTGGATTGTTTGATTATGTTTGGGTTCGATTCTACGACAGTCCTTCGCGCCAATTCAATGGTTCGAGCCTAGATAACCTCTTTAATGCATGGAATTTTTGGCAAGTGATTCCAGCTAAGGAAGTGTTCTTAGGACTAGCGGCAGATCCTGCTGCAGCGGCAGAGGGTGGATTTATTCCTACAAAGTTGGTTGTTTCCGATGTTCTTCCACAAATTACGGATTCTGCCTTGTATGGAGGAGTTATGCTTTGGAGTAAGGAATTCGACCATGGATATAGTGATGAAATTAAGGACTTCGTCTAA
mRNA sequence
ATGGCCCAACTCGCTCAAGCATTGAAAGACATGGATCCGAAAGGTGTCCAGCTTGGGGCAGCTCCAAAATGCCAGTTTCCTGATGGGCACTTGGGAGCTGCAATAAACACTGGATTGTTTGATTATGTTTGGGTTCGATTCTACGACAGTCCTTCGCGCCAATTCAATGGTTCGAGCCTAGATAACCTCTTTAATGCATGGAATTTTTGGCAAGTGATTCCAGCTAAGGAAGTGTTCTTAGGACTAGCGGCAGATCCTGCTGCAGCGGCAGAGGGTGGATTTATTCCTACAAAGTTGGTTGTTTCCGATGTTCTTCCACAAATTACGGATTCTGCCTTGTATGGAGGAGTTATGCTTTGGAGTAAGGAATTCGACCATGGATATAGTGATGAAATTAAGGACTTCGTCTAA
Coding sequence (CDS)
ATGGCCCAACTCGCTCAAGCATTGAAAGACATGGATCCGAAAGGTGTCCAGCTTGGGGCAGCTCCAAAATGCCAGTTTCCTGATGGGCACTTGGGAGCTGCAATAAACACTGGATTGTTTGATTATGTTTGGGTTCGATTCTACGACAGTCCTTCGCGCCAATTCAATGGTTCGAGCCTAGATAACCTCTTTAATGCATGGAATTTTTGGCAAGTGATTCCAGCTAAGGAAGTGTTCTTAGGACTAGCGGCAGATCCTGCTGCAGCGGCAGAGGGTGGATTTATTCCTACAAAGTTGGTTGTTTCCGATGTTCTTCCACAAATTACGGATTCTGCCTTGTATGGAGGAGTTATGCTTTGGAGTAAGGAATTCGACCATGGATATAGTGATGAAATTAAGGACTTCGTCTAA
Protein sequence
MAQLAQALKDMDPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDNLFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSKEFDHGYSDEIKDFV
Homology
BLAST of Lag0030750 vs. NCBI nr
Match:
KAF9671189.1 (hypothetical protein SADUNF_Sadunf12G0021600 [Salix dunnii])
HSP 1 Score: 158.7 bits (400), Expect = 3.6e-35
Identity = 76/131 (58.02%), Postives = 93/131 (70.99%), Query Frame = 0
Query: 4 LAQALKDM-DPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 63
LA+AL K V L AAP+C FPD HL AI TGLFDYVWV+FY++P Q++G++ +N
Sbjct: 162 LARALNGFSQQKKVYLAAAPQCPFPDAHLDTAIKTGLFDYVWVQFYNNPPCQYSGNA-NN 221
Query: 64 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 123
L +AW W + A +VFLGL ADPAAA GGFIP ++ S VLP I S YGGVMLWSK
Sbjct: 222 LLSAWKQWTTVQANQVFLGLPADPAAAPSGGFIPADVLTSQVLPSIKSSPKYGGVMLWSK 281
Query: 124 EFDHGYSDEIK 134
+FD+GYS IK
Sbjct: 282 QFDNGYSSAIK 291
BLAST of Lag0030750 vs. NCBI nr
Match:
KAF8412165.1 (hypothetical protein HHK36_000123 [Tetracentron sinense])
HSP 1 Score: 158.7 bits (400), Expect = 3.6e-35
Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 0
Query: 3 QLAQALKDMDPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 62
+LA+AL + V L AAP+C FPD HL AI+TGLFDYVWV+FY++P Q++G++ DN
Sbjct: 159 ELAKALAGFTQQKVYLAAAPQCPFPDAHLSGAISTGLFDYVWVQFYNNPPCQYSGNA-DN 218
Query: 63 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 122
L +AWN W + A ++FLGL A AA GGFIP ++ S VLP I S+ YGGVMLWSK
Sbjct: 219 LISAWNQWTTVQASQIFLGLPAAAEAAPSGGFIPADVLASQVLPTIKGSSKYGGVMLWSK 278
Query: 123 EFDHGYSDEIKDFV 137
+FD+GYS IK V
Sbjct: 279 KFDNGYSSAIKSSV 291
BLAST of Lag0030750 vs. NCBI nr
Match:
QEE82233.1 (basic endochitinase [Siraitia grosvenorii])
HSP 1 Score: 158.7 bits (400), Expect = 3.6e-35
Identity = 74/134 (55.22%), Postives = 93/134 (69.40%), Query Frame = 0
Query: 4 LAQALKDM-DPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 63
LA+AL + + V L AP+C FPD HL AAINTGLFDYVWV+FY++P Q+ + +N
Sbjct: 163 LARALNGFNNQRKVFLATAPQCPFPDAHLNAAINTGLFDYVWVQFYNNPPCQYASGNANN 222
Query: 64 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 123
+ N+W W +PAKE+FLGL A P AA GGFIP +++S +LP I S YGGVMLWSK
Sbjct: 223 VLNSWRRWITVPAKELFLGLPAAPNAAPSGGFIPANVLISQILPTIKGSPKYGGVMLWSK 282
Query: 124 EFDHGYSDEIKDFV 137
FD+GYS IK V
Sbjct: 283 AFDNGYSSAIKSSV 296
BLAST of Lag0030750 vs. NCBI nr
Match:
CAB4271535.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 158.3 bits (399), Expect = 4.7e-35
Identity = 77/134 (57.46%), Postives = 92/134 (68.66%), Query Frame = 0
Query: 3 QLAQALKDMDPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 62
+LA++L K V L AAP+C FPD HL AI TGLFDYVWV+FY++P QF ++ N
Sbjct: 165 ELARSLSGRASK-VYLAAAPQCPFPDAHLDGAIKTGLFDYVWVQFYNNPPCQFADNNAAN 224
Query: 63 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 122
L +AWN W AK+VFLGL A P AA GGFIP + S VLP I S YGGVMLWSK
Sbjct: 225 LLSAWNQWTSTEAKQVFLGLPAAPEAAPSGGFIPADALKSQVLPNIKSSPKYGGVMLWSK 284
Query: 123 EFDHGYSDEIKDFV 137
++D+GYSD IKD V
Sbjct: 285 QYDNGYSDSIKDSV 297
BLAST of Lag0030750 vs. NCBI nr
Match:
KAG6753741.1 (hypothetical protein POTOM_041739 [Populus tomentosa])
HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34
Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 0
Query: 4 LAQALKDM-DPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 63
LA+AL K V L AAP+C FPD HL AI TGLFDYVWV+FY++P Q++G++ +N
Sbjct: 162 LARALNGFSQQKKVHLAAAPQCPFPDAHLDTAIKTGLFDYVWVQFYNNPPCQYSGNA-NN 221
Query: 64 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 123
L +AWN W + A +VFLGL A PAAA GGFIP ++ S VLP I +S YGGVMLW+K
Sbjct: 222 LLSAWNQWTTVQANQVFLGLPAAPAAAPSGGFIPADVLTSQVLPSIKNSPKYGGVMLWNK 281
Query: 124 EFDHGYSDEIKDFV 137
+FD+GYS IK V
Sbjct: 282 QFDNGYSAAIKGSV 294
BLAST of Lag0030750 vs. ExPASy Swiss-Prot
Match:
P36908 (Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 9.2e-34
Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 3 QLAQALKDMDPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDN 62
+LA+AL + V L AAP+C +PD HL +AI TGLFDYVWV+FY++P Q++ +++N
Sbjct: 158 ELAKALNGFSQQKVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINN 217
Query: 63 LFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSK 122
L NAWN W AK+VFLG+ A AAA GG IP ++ S VLP I S YGGVM+W +
Sbjct: 218 LVNAWNQWTSSQAKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDR 277
Query: 123 --EFDHGYSDEIKDFV 137
+ GYS+ IK V
Sbjct: 278 FNDAQSGYSNAIKGSV 293
BLAST of Lag0030750 vs. ExPASy Swiss-Prot
Match:
P17541 (Acidic endochitinase OS=Cucumis sativus OX=3659 PE=1 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 2.0e-33
Identity = 70/130 (53.85%), Postives = 87/130 (66.92%), Query Frame = 0
Query: 4 LAQALKDMDPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDNL 63
LAQ LK+ V L AAP+C PD HL AAI TGLFD VWV+FY++P F + DNL
Sbjct: 162 LAQELKNFGQ--VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMF-ADNADNL 221
Query: 64 FNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSKE 123
++WN W P ++++GL A AA GGFIP +++S VLP I S+ YGGVMLWSK
Sbjct: 222 LSSWNQWTAFPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKA 281
Query: 124 FDHGYSDEIK 134
FD+GYSD IK
Sbjct: 282 FDNGYSDSIK 288
BLAST of Lag0030750 vs. ExPASy Swiss-Prot
Match:
P29060 (Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 3 QLAQALKDM-DPKGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLD 62
+LA+ L + V L AAP+C FPD L A++TGLFDYVWV+FY++P Q++G S D
Sbjct: 158 ELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSAD 217
Query: 63 NLFNAWNFWQVIPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWS 122
NL N WN W I A ++FLGL A AA GFIP+ ++VS VLP I S YGGVMLWS
Sbjct: 218 NLKNYWNQWNAIQAGKIFLGLPAAQGAAG-SGFIPSDVLVSQVLPLINGSPKYGGVMLWS 277
Query: 123 KEFDHGYSDEIK 134
K +D+GYS IK
Sbjct: 278 KFYDNGYSSAIK 288
BLAST of Lag0030750 vs. ExPASy Swiss-Prot
Match:
P23472 (Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2)
HSP 1 Score: 136.7 bits (343), Expect = 1.9e-31
Identity = 65/126 (51.59%), Postives = 89/126 (70.63%), Query Frame = 0
Query: 14 KGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDNLFNAWNFWQV- 73
K V L AAP+C FPD +LG A+NTGLFDYVWV+FY++P Q++ +++N+ N+WN W
Sbjct: 175 KKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTS 234
Query: 74 IPAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSKEFD--HGYSD 133
I A ++FLGL A P AA G++P +++S +LP+I S YGGVMLWSK +D +GYS
Sbjct: 235 INAGKIFLGLPAAPEAAG-SGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 294
Query: 134 EIKDFV 137
I D V
Sbjct: 295 SILDSV 299
BLAST of Lag0030750 vs. ExPASy Swiss-Prot
Match:
P36910 (Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 2.5e-31
Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 0
Query: 14 KGVQLGAAPKCQFPDGHLGAAINTGLFDYVWVRFYDSPSRQFNGSSLDNLFNAWNFWQVI 73
K V L AAP+C PD L AI TGLFDYVWV+FY++P Q++ +S DNL ++WN W +
Sbjct: 173 KTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYD-TSADNLLSSWNQWTTV 232
Query: 74 PAKEVFLGLAADPAAAAEGGFIPTKLVVSDVLPQITDSALYGGVMLWSKEFDHGYSDEIK 133
A ++FLGL A AA GFIP + S VLP I SA YGGVMLWSK +D GYS IK
Sbjct: 233 QANQIFLGLPASTDAAG-SGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYDSGYSSAIK 292
Query: 134 DFV 137
V
Sbjct: 293 SSV 293
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAF9671189.1 | 3.6e-35 | 58.02 | hypothetical protein SADUNF_Sadunf12G0021600 [Salix dunnii] | [more] |
KAF8412165.1 | 3.6e-35 | 55.22 | hypothetical protein HHK36_000123 [Tetracentron sinense] | [more] |
QEE82233.1 | 3.6e-35 | 55.22 | basic endochitinase [Siraitia grosvenorii] | [more] |
CAB4271535.1 | 4.7e-35 | 57.46 | unnamed protein product [Prunus armeniaca] | [more] |
KAG6753741.1 | 1.0e-34 | 56.72 | hypothetical protein POTOM_041739 [Populus tomentosa] | [more] |
Match Name | E-value | Identity | Description | |
P36908 | 9.2e-34 | 50.00 | Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1 | [more] |
P17541 | 2.0e-33 | 53.85 | Acidic endochitinase OS=Cucumis sativus OX=3659 PE=1 SV=1 | [more] |
P29060 | 3.5e-33 | 53.79 | Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1 | [more] |
P23472 | 1.9e-31 | 51.59 | Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2 | [more] |
P36910 | 2.5e-31 | 54.47 | Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1 | [more] |