Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCTGGAGACTTGAGGAGCAACTTTGAGGCACTGAAAGATTTTAACAAGGAGCAAGAAACAAAGGTGCGTTACCATGAAAGCAAAGTCCAGAACATGATCATTGGGTACCTCGTTTGGCTACGCTTGTTCTTCTTTGGTATTTCTCAGATTTCCCTGTCCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGCCTTCTGTGTACTTTTGTCTACTTTGTGATTTTCCTTGATGCTGTCACTATGTTATCTCGGACCCAGTACCAACTGGACATAGTCCGGAGGGAACTAATGGAAGTTTGCCAACAAATTTTGGTAACCCAAAACCAAGAGGATGTGAATCTATCGATGGGGGCTGGAGAATCTGGTGATGGATTTGATATTGCTTTCCATGAGAAGATGGTCATGCTTGATCATTTTAGAACTGTTGAGAGGAAAGTTTACATCTGCTTCACTGTTTGTGCTTTGCTTGCTATCACTGCTGTTGAAGTATATGTTTCCAAGTATTTGTTGTGCAACTGA mRNA sequence
ATGGCGCCTGGAGACTTGAGGAGCAACTTTGAGGCACTGAAAGATTTTAACAAGGAGCAAGAAACAAAGGTGCGTTACCATGAAAGCAAAGTCCAGAACATGATCATTGGGTACCTCGTTTGGCTACGCTTGTTCTTCTTTGGTATTTCTCAGATTTCCCTGTCCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGCCTTCTGTGTACTTTTGTCTACTTTGTGATTTTCCTTGATGCTGTCACTATGTTATCTCGGACCCAGTACCAACTGGACATAGTCCGGAGGGAACTAATGGAAGTTTGCCAACAAATTTTGGTAACCCAAAACCAAGAGGATGTGAATCTATCGATGGGGGCTGGAGAATCTGGTGATGGATTTGATATTGCTTTCCATGAGAAGATGGTCATGCTTGATCATTTTAGAACTGTTGAGAGGAAAGTTTACATCTGCTTCACTGTTTGTGCTTTGCTTGCTATCACTGCTGTTGAAGTATATGTTTCCAAGTATTTGTTGTGCAACTGA Coding sequence (CDS)
ATGGCGCCTGGAGACTTGAGGAGCAACTTTGAGGCACTGAAAGATTTTAACAAGGAGCAAGAAACAAAGGTGCGTTACCATGAAAGCAAAGTCCAGAACATGATCATTGGGTACCTCGTTTGGCTACGCTTGTTCTTCTTTGGTATTTCTCAGATTTCCCTGTCCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGCCTTCTGTGTACTTTTGTCTACTTTGTGATTTTCCTTGATGCTGTCACTATGTTATCTCGGACCCAGTACCAACTGGACATAGTCCGGAGGGAACTAATGGAAGTTTGCCAACAAATTTTGGTAACCCAAAACCAAGAGGATGTGAATCTATCGATGGGGGCTGGAGAATCTGGTGATGGATTTGATATTGCTTTCCATGAGAAGATGGTCATGCTTGATCATTTTAGAACTGTTGAGAGGAAAGTTTACATCTGCTTCACTGTTTGTGCTTTGCTTGCTATCACTGCTGTTGAAGTATATGTTTCCAAGTATTTGTTGTGCAACTGA Protein sequence
MAPGDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKDWWVILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDVNLSMGAGESGDGFDIAFHEKMVMLDHFRTVERKVYICFTVCALLAITAVEVYVSKYLLCN
Homology
BLAST of Lag0030746 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 246.5 bits (628), Expect = 1.7e-61
Identity = 122/176 (69.32%), Postives = 149/176 (84.66%), Query Frame = 0
Query: 1 MAPGDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKD 60 MA G+L FE LKD N++QE++VRY+E+KVQN++ GYL++ RLFFFGISQ S SF CKD Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60 Query: 61 WWVILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDVNLSM 120 WWVILALSLLC+F+YF++FLDAV ML RTQYQLDI+ +EL E+ QQILV++NQ+DV LSM Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120 Query: 121 GAGESGDGFDIAFHEKMVMLDHFRTVERKVYICFTVCALLAITAVEVYVSKYLLCN 177 GES GF+ FHEKM+MLDHFR V RKVYI FTV ALLA+TA+E+YVSKY+LCN Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Lag0030746 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 232.6 bits (592), Expect = 2.5e-57
Identity = 116/176 (65.91%), Postives = 146/176 (82.95%), Query Frame = 0
Query: 1 MAPGDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKD 60 MA G+LR F LKD N++QE++VRYHE+K Q ++ GYL+ RLFFFGISQ S S KC D Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTS-SSKCHD 60 Query: 61 WWVILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDVNLSM 120 WWVIL+LSLLC+FVYF++FLDA T L +T+ QLD++ +EL+EVCQQILV QNQ+DV+L+M Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120 Query: 121 GAGESGDGFDIAFHEKMVMLDHFRTVERKVYICFTVCALLAITAVEVYVSKYLLCN 177 G+ DGF+ FHEKM++LDHFR V RKVYI FTVCAL+A+TA+E+YVSKYLLCN Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Lag0030746 vs. NCBI nr
Match:
KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 224.2 bits (570), Expect = 9.0e-55
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 0
Query: 4 GDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKDWWV 63 GDLR NF LKD N QET +RY E+K+QN+++GYL W RLFFFG +S SFKCKDWWV Sbjct: 48 GDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFG---VSFSFKCKDWWV 107 Query: 64 ILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDVNLSMGAG 123 ILAL+L TF YF++F+DAV MLSRT QLDI+R+EL E+CQQILV QNQ++V LSM AG Sbjct: 108 ILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAG 167 Query: 124 ESGDGFDIAFHEKMVMLDHFRTVE--RKVYICFTVCALLAITAVEVYVSKYLLCN 177 E DGF+++FHE+M MLD FR VE RKVYI F VC LLAITA+E+Y K LLCN Sbjct: 168 EDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Lag0030746 vs. NCBI nr
Match:
KAA0042577.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05981.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 221.9 bits (564), Expect = 4.5e-54
Identity = 118/182 (64.84%), Postives = 143/182 (78.57%), Query Frame = 0
Query: 1 MAPGDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKD 60 MA GDLRS FE + KEQE KV YHE+KVQN++IGYLV+ RL FG +Q SL FKCKD Sbjct: 1 MASGDLRS-FEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFGFTQTSLPFKCKD 60 Query: 61 WWVILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDV---- 120 WWVILAL+L CT VYF + LDAVTML RT+Y+LDI+R+EL+E+CQ+ILV+QNQ D+ Sbjct: 61 WWVILALTLSCTLVYFSLLLDAVTMLCRTEYELDIIRKELIEICQRILVSQNQRDLVDLT 120 Query: 121 NLSMGAGESGDGFD--IAFHEKMVMLDHFRTVERKVYICFTVCALLAITAVEVYVSKYLL 177 L+M A ES DGFD FH+KM+MLDHFRTV RKV+I FTV ALL + +E+YVSKYLL Sbjct: 121 QLTMEAEESSDGFDFGFGFHQKMLMLDHFRTVRRKVHIYFTVSALLVVVVIELYVSKYLL 180
BLAST of Lag0030746 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 107/175 (61.14%), Postives = 141/175 (80.57%), Query Frame = 0
Query: 1 MAPGDLRSNFEALKDFNKEQETKVRYHESKVQNMIIGYLVWLRLFFFGISQISLSFKCKD 60 MA G+L+ F+ L D N++QETKV YH++KVQN++ GYL+W+RLF +GISQ +LSFKC + Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQ-ALSFKCNN 60 Query: 61 WWVILALSLLCTFVYFVIFLDAVTMLSRTQYQLDIVRRELMEVCQQILVTQNQEDVNLSM 120 WWVILALSLL F+YF++FLDA+TML R QYQLDI+ +EL+E CQQ L+ +N++D++L + Sbjct: 61 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-V 120 Query: 121 GAGESGDGFDIAFHEKMVMLDHFRTVERKVYICFTVCALLAITAVEVYVSKYLLC 176 AGES DGF+ FH+KM+MLDH V R VYI F VCALLA+ A+E+Y KYLLC Sbjct: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_022157182.1 1.7e-61 69.32 uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.1 2.5e-57 65.91 uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] [more]
KAA0042579.1 9.0e-55 66.29 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
KAA0042577.1 4.5e-54 64.84 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
KAG6579338.1 1.6e-51 61.14 hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G C G C C T G G A G A C T T G A G G A G C A A C T T T G A G G C A C T G A A A G A T T T T A A C A A G G A G C A A G A A A C A A A G G T G C G T T A C C A T G A A A G C A A A G T C C A G A A C A T G A T C A T T G G G T A C C T C G T T T G G C T A C G C T T G T T C T T C T T T G G T A T T T C T C A G A T T T C C C T G T C C T T T A A G T G C A A G G A T T G G T G G G T C A T T T T G G C T T T A A G C C T T C T G T G T A C T T T T G T C T A C T T T G T G A T T T T C C T T G A T G C T G T C A C T A T G T T A T C T C G G A C C C A G T A C C A A C T G G A C A T A G T C C G G A G G G A A C T A A T G G A A G T T T G C C A A C A A A T T T T G G T A A C C C A A A A C C A A G A G G A T G T G A A T C T A T C G A T G G G G G C T G G A G A A T C T G G T G A T G G A T T T G A T A T T G C T T T C C A T G A G A A G A T G G T C A T G C T T G A T C A T T T T A G A A C T G T T G A G A G G A A A G T T T A C A T C T G C T T C A C T G T T T G T G C T T T G C T T G C T A T C A C T G C T G T T G A A G T A T A T G T T T C C A A G T A T T T G T T G T G C A A C T G A 50 100 150 200 250 300 350 400 450 500 Score = Score = Sequence PTHR33287 PTHR33287:SF8
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PANTHER PTHR33287 OS03G0453550 PROTEIN coord: 4..176
None No IPR available PANTHER PTHR33287:SF8 SUBFAMILY NOT NAMED coord: 4..176
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016021
integral component of membrane