Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA mRNA sequence
ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA Coding sequence (CDS)
ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA Protein sequence
MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN
Homology
BLAST of Lag0030743 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 244.6 bits (623), Expect = 6.4e-61
Identity = 130/176 (73.86%), Postives = 143/176 (81.25%), Query Frame = 0
Query: 1 MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60 MALGEL R FEE++ INE QE+RVRY+ETKVQNIV YLI+ RLFFFGI Q SS F CKD Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60 Query: 61 WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120 WWVILALSLLC+ +YFLLFLDAV ML RTQYQLDII KEL E+ QILV +NQDD SM Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120 Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN 177 E GE + GFE FH KMLMLDHFRIVGRKVY+ FTV ALLA+TAIELY Y+LCN Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Lag0030743 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 123/176 (69.89%), Postives = 139/176 (78.98%), Query Frame = 0
Query: 1 MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60 MA+GELRR F E++ INE QE+RVRYHE K Q IV YLI RLFFFGI Q SS KC D Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60 Query: 61 WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120 WWVIL+LSLLC+ VYFLLFLDA T L +T+ QLD+I KELIEVC QILV QNQDD +M Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120 Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN 177 E G+ +DGFE FH KML+LDHFR VGRKVY+ FTVCAL+A+TAIELY YLLCN Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Lag0030743 vs. NCBI nr
Match:
KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 121/176 (68.75%), Postives = 140/176 (79.55%), Query Frame = 0
Query: 3 LGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWW 62 LG+LRRNF ++ IN++QET +RY ETK+QN+V+ YL WGRLFFFG+ S FKCKDWW Sbjct: 47 LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGV---SFSFKCKDWW 106 Query: 63 VILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEA 122 VILAL+L T YFLLF+DAV MLSRT QLDIIRKEL E+C QILV QNQD+ SMEA Sbjct: 107 VILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEA 166 Query: 123 GECTDGFELSFHVKMLMLDHFRIV--GRKVYVCFTVCALLALTAIELYACNYLLCN 177 GE +DGFELSFH +M MLD FR+V GRKVY+ F VC LLA+TAIELYAC LLCN Sbjct: 167 GEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Lag0030743 vs. NCBI nr
Match:
KAE8647812.1 (hypothetical protein Csa_000331 [Cucumis sativus])
HSP 1 Score: 217.6 bits (553), Expect = 8.4e-53
Identity = 116/176 (65.91%), Postives = 135/176 (76.70%), Query Frame = 0
Query: 3 LGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWW 62 LG+LR+NF ++ IN++QET +RY ETK+QNIV+ YL WGRLFFFG S FKCKDWW Sbjct: 4 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63 Query: 63 VILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEA 122 V+L+L+LL T +Y LLF+DAV MLSRT QL IIRKEL E+C QILV QNQD SME Sbjct: 64 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123 Query: 123 GECTDGFELSFHVKMLMLDHFRIV--GRKVYVCFTVCALLALTAIELYACNYLLCN 177 GEC DGFELSFH +M MLD F +V GRK Y+ F VCALL +TAIELYAC LLCN Sbjct: 124 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 176
BLAST of Lag0030743 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 214.5 bits (545), Expect = 7.1e-52
Identity = 117/175 (66.86%), Postives = 134/175 (76.57%), Query Frame = 0
Query: 1 MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60 MA GEL+R F+E+ +NE QET+V YH+ KVQNIV YLIW RLF +GI QA S FKC + Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALS-FKCNN 60 Query: 61 WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120 WWVILALSLL +YFLLFLDA+TML R QYQLDII KELIE C Q L+ +N+DD + + Sbjct: 61 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDD-MDLV 120 Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLC 176 EAGE DGFE FH KMLMLDH IVGR VY+ F VCALLA+ AIELYA YLLC Sbjct: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_022157182.1 6.4e-61 73.86 uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.1 1.3e-56 69.89 uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] [more]
KAA0042579.1 2.4e-55 68.75 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
KAE8647812.1 8.4e-53 65.91 hypothetical protein Csa_000331 [Cucumis sativus] [more]
KAG6579338.1 7.1e-52 66.86 hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G C G C T T G G A G A G T T G A G G A G G A A T T T T G A G G A G G T C A G A G C T A T T A A T G A G A G C C A A G A A A C A A G G G T G C G T T A C C A T G A A A C C A A A G T C C A G A A C A T T G T T A T T G C C T A C C T C A T T T G G G G A C G C C T G T T C T T C T T T G G T A T C T T T C A G G C T T C T T C C T T C T T T A A G T G C A A G G A T T G G T G G G T C A T T T T G G C T T T A A G T C T T T T G T G C A C C T C T G T C T A C T T T T T G C T T T T C C T G G A T G C T G T C A C T A T G T T A T C T C G A A C C C A G T A C C A A C T A G A C A T A A T C C G C A A G G A A C T A A T T G A A G T T T G C C A T C A A A T T T T G G T A G T C C A A A A C C A A G A T G A T G G G G T T A C A T C A A T G G A G G C T G G A G A A T G T A C T G A T G G A T T T G A A T T G A G T T T C C A T G T G A A G A T G C T T A T G C T T G A T C A T T T T A G A A T T G T T G G G A G G A A A G T T T A T G T C T G C T T C A C T G T C T G T G C T T T G C T T G C T C T T A C T G C T A T T G A A T T A T A T G C T T G C A A C T A C T T G T T G T G C A A C T G A 50 100 150 200 250 300 350 400 450 500 Score = Score = Sequence PTHR33287:SF8 PTHR33287
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PANTHER PTHR33287:SF8 SUBFAMILY NOT NAMED coord: 2..176
None No IPR available PANTHER PTHR33287 OS03G0453550 PROTEIN coord: 2..176
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016021
integral component of membrane