Lag0030743 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0030743
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionWD repeat-containing protein 91-like protein
Locationchr11: 992628 .. 993158 (+)
RNA-Seq ExpressionLag0030743
SyntenyLag0030743
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA

mRNA sequence

ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA

Coding sequence (CDS)

ATGGCGCTTGGAGAGTTGAGGAGGAATTTTGAGGAGGTCAGAGCTATTAATGAGAGCCAAGAAACAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTATTGCCTACCTCATTTGGGGACGCCTGTTCTTCTTTGGTATCTTTCAGGCTTCTTCCTTCTTTAAGTGCAAGGATTGGTGGGTCATTTTGGCTTTAAGTCTTTTGTGCACCTCTGTCTACTTTTTGCTTTTCCTGGATGCTGTCACTATGTTATCTCGAACCCAGTACCAACTAGACATAATCCGCAAGGAACTAATTGAAGTTTGCCATCAAATTTTGGTAGTCCAAAACCAAGATGATGGGGTTACATCAATGGAGGCTGGAGAATGTACTGATGGATTTGAATTGAGTTTCCATGTGAAGATGCTTATGCTTGATCATTTTAGAATTGTTGGGAGGAAAGTTTATGTCTGCTTCACTGTCTGTGCTTTGCTTGCTCTTACTGCTATTGAATTATATGCTTGCAACTACTTGTTGTGCAACTGA

Protein sequence

MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN
Homology
BLAST of Lag0030743 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 6.4e-61
Identity = 130/176 (73.86%), Postives = 143/176 (81.25%), Query Frame = 0

Query: 1   MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60
           MALGEL R FEE++ INE QE+RVRY+ETKVQNIV  YLI+ RLFFFGI Q SS F CKD
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 61  WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120
           WWVILALSLLC+ +YFLLFLDAV ML RTQYQLDII KEL E+  QILV +NQDD   SM
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN 177
           E GE + GFE  FH KMLMLDHFRIVGRKVY+ FTV ALLA+TAIELY   Y+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Lag0030743 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 123/176 (69.89%), Postives = 139/176 (78.98%), Query Frame = 0

Query: 1   MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60
           MA+GELRR F E++ INE QE+RVRYHE K Q IV  YLI  RLFFFGI Q SS  KC D
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60

Query: 61  WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120
           WWVIL+LSLLC+ VYFLLFLDA T L +T+ QLD+I KELIEVC QILV QNQDD   +M
Sbjct: 61  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120

Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLCN 177
           E G+ +DGFE  FH KML+LDHFR VGRKVY+ FTVCAL+A+TAIELY   YLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Lag0030743 vs. NCBI nr
Match: KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 121/176 (68.75%), Postives = 140/176 (79.55%), Query Frame = 0

Query: 3   LGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWW 62
           LG+LRRNF  ++ IN++QET +RY ETK+QN+V+ YL WGRLFFFG+   S  FKCKDWW
Sbjct: 47  LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGV---SFSFKCKDWW 106

Query: 63  VILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEA 122
           VILAL+L  T  YFLLF+DAV MLSRT  QLDIIRKEL E+C QILV QNQD+   SMEA
Sbjct: 107 VILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEA 166

Query: 123 GECTDGFELSFHVKMLMLDHFRIV--GRKVYVCFTVCALLALTAIELYACNYLLCN 177
           GE +DGFELSFH +M MLD FR+V  GRKVY+ F VC LLA+TAIELYAC  LLCN
Sbjct: 167 GEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219

BLAST of Lag0030743 vs. NCBI nr
Match: KAE8647812.1 (hypothetical protein Csa_000331 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 8.4e-53
Identity = 116/176 (65.91%), Postives = 135/176 (76.70%), Query Frame = 0

Query: 3   LGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKDWW 62
           LG+LR+NF  ++ IN++QET +RY ETK+QNIV+ YL WGRLFFFG    S  FKCKDWW
Sbjct: 4   LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63

Query: 63  VILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSMEA 122
           V+L+L+LL T +Y LLF+DAV MLSRT  QL IIRKEL E+C QILV QNQD    SME 
Sbjct: 64  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123

Query: 123 GECTDGFELSFHVKMLMLDHFRIV--GRKVYVCFTVCALLALTAIELYACNYLLCN 177
           GEC DGFELSFH +M MLD F +V  GRK Y+ F VCALL +TAIELYAC  LLCN
Sbjct: 124 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 176

BLAST of Lag0030743 vs. NCBI nr
Match: KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.5 bits (545), Expect = 7.1e-52
Identity = 117/175 (66.86%), Postives = 134/175 (76.57%), Query Frame = 0

Query: 1   MALGELRRNFEEVRAINESQETRVRYHETKVQNIVIAYLIWGRLFFFGIFQASSFFKCKD 60
           MA GEL+R F+E+  +NE QET+V YH+ KVQNIV  YLIW RLF +GI QA S FKC +
Sbjct: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALS-FKCNN 60

Query: 61  WWVILALSLLCTSVYFLLFLDAVTMLSRTQYQLDIIRKELIEVCHQILVVQNQDDGVTSM 120
           WWVILALSLL   +YFLLFLDA+TML R QYQLDII KELIE C Q L+ +N+DD +  +
Sbjct: 61  WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDD-MDLV 120

Query: 121 EAGECTDGFELSFHVKMLMLDHFRIVGRKVYVCFTVCALLALTAIELYACNYLLC 176
           EAGE  DGFE  FH KMLMLDH  IVGR VY+ F VCALLA+ AIELYA  YLLC
Sbjct: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157182.16.4e-6173.86uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.11.3e-5669.89uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
KAA0042579.12.4e-5568.75WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
KAE8647812.18.4e-5365.91hypothetical protein Csa_000331 [Cucumis sativus][more]
KAG6579338.17.1e-5266.86hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 2..176
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 2..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0030743.1Lag0030743.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane