Lag0030691 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0030691
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionWAS/WASL-interacting protein family member 2, putative isoform 1
Locationchr11: 440526 .. 441163 (+)
RNA-Seq ExpressionLag0030691
SyntenyLag0030691
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCAAATCGATCATTGATGATGGAAGATTATAAAATTCTTCAATGGCTAGGACTTGAATTGCAGTCTCTGAATTTTGTAGTGTAAAATTCAATTATGGTGTGCTTTGATCTTTTGGCTCGCAAGAAGAAGACCCATTTGCTTTCATTGGATGAAAAATTGAAATCAATGGTCGGGATAAAGGAATTTGGTTTTGAATTTTGAAGGATGTTGTTTTTGTTTTCCCGTGTATTTATTTGGTTTAGTTATTAATAAAACTTATTTTTTCCAGAAAAAATGTTTCTTGACTGATCTATTAGTAATGTACATTGAATGAGGGGGAAAAAATCCTCTGAATGCATTGTTGGGTTTATTATTTGATGCATTCCCAGCGACTCTGTTTTGTTTTTTTTTTTTTCAGGGAAAGACGAACATGGCTGGATCTCCTCACTCCTCAGTCCACTCTTAGTGGGCTTGGGAGTTTTTCGGCTTGGAGTTCGGTGTTGAGCGACGGTAGTCCAAACGAGCCGTCGCTGCCAACCACCCCTTTCAGCGGTGATAAAAACACTTGGGATATTATCTTTGTTGCTGCAGGGCAGAAGGGGAAAGGAGAGAGGGGAGAGGGGGGCTCGGTTTGGAAGAAGAAAAAGGAGTAG

mRNA sequence

ATGAGATCAAATCGATCATTGATGATGGAAGATTATAAAATTCTTCAATGGCTAGGACTTGAATTGCAGTCTCTGAATTTTGTAGTGGAAAGACGAACATGGCTGGATCTCCTCACTCCTCAGTCCACTCTTAGTGGGCTTGGGAGTTTTTCGGCTTGGAGTTCGGTGTTGAGCGACGGTAGTCCAAACGAGCCGTCGCTGCCAACCACCCCTTTCAGCGGTGATAAAAACACTTGGGATATTATCTTTGTTGCTGCAGGGCAGAAGGGGAAAGGAGAGAGGGGAGAGGGGGGCTCGGTTTGGAAGAAGAAAAAGGAGTAG

Coding sequence (CDS)

ATGAGATCAAATCGATCATTGATGATGGAAGATTATAAAATTCTTCAATGGCTAGGACTTGAATTGCAGTCTCTGAATTTTGTAGTGGAAAGACGAACATGGCTGGATCTCCTCACTCCTCAGTCCACTCTTAGTGGGCTTGGGAGTTTTTCGGCTTGGAGTTCGGTGTTGAGCGACGGTAGTCCAAACGAGCCGTCGCTGCCAACCACCCCTTTCAGCGGTGATAAAAACACTTGGGATATTATCTTTGTTGCTGCAGGGCAGAAGGGGAAAGGAGAGAGGGGAGAGGGGGGCTCGGTTTGGAAGAAGAAAAAGGAGTAG

Protein sequence

MRSNRSLMMEDYKILQWLGLELQSLNFVVERRTWLDLLTPQSTLSGLGSFSAWSSVLSDGSPNEPSLPTTPFSGDKNTWDIIFVAAGQKGKGERGEGGSVWKKKKE
Homology
[Close]
BLAST of Lag0030691 vs. NCBI nr
Match: XP_008464895.1 (PREDICTED: uncharacterized protein LOC103502654 [Cucumis melo] >KAA0051556.1 WAS/WASL-interacting protein family member 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK21266.1 WAS/WASL-interacting protein family member 2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 3.3e-12
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0 

Query: 39  TPQSTLSGLGSFSAWSSVLSDGSPNEPSL----PTTPFSGDKNTWDIIFVAAGQ 89
           +PQSTLSG+GS+SAWSSV SDGSPN PSL    PTTPF G+ NTWD+I+ AAGQ
Sbjct: 96  SPQSTLSGVGSWSAWSSVSSDGSPNGPSLAPSPPTTPFGGENNTWDLIYAAAGQ 149

[Close]
BLAST of Lag0030691 vs. NCBI nr
Match: XP_004149945.1 (uncharacterized protein LOC101215147 [Cucumis sativus] >KGN50597.1 hypothetical protein Csa_021479 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 3.3e-12
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0 

Query: 39  TPQSTLSGLGSFSAWSSVLSDGSPNEPSL----PTTPFSGDKNTWDIIFVAAGQ 89
           +PQSTLSG+GS+SAWSSV SDGSPN PSL    PTTPF G+ NTWD+I+ AAGQ
Sbjct: 96  SPQSTLSGVGSWSAWSSVSSDGSPNGPSLAPSPPTTPFGGENNTWDLIYAAAGQ 149

[Close]
BLAST of Lag0030691 vs. NCBI nr
Match: XP_038893422.1 (uncharacterized protein LOC120082215 [Benincasa hispida])

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-11
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 39  TPQSTLSGLGSFSAWSSVLSDGSPN----EPSLPTTPFSGDKNTWDIIFVAAGQ 89
           +PQSTLSG+GS+SAWS+V SDGSPN     PS PTTPF GD NTWD+I+ AAGQ
Sbjct: 96  SPQSTLSGVGSWSAWSTVSSDGSPNGPSQAPSPPTTPFGGDNNTWDLIYAAAGQ 149

[Close]
BLAST of Lag0030691 vs. NCBI nr
Match: XP_023535272.1 (uncharacterized protein LOC111796750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 39 TPQSTLSGLGSFSAWSSVLSDGSPN----EPSLPTTPFSGDKNTWDIIFVAAGQ 89
          +PQSTLSG GS+SAWSSV SDGSPN     PS PTTPF GD++TWD+I+ AAGQ
Sbjct: 4  SPQSTLSGFGSWSAWSSVSSDGSPNGPSQAPSPPTTPFGGDEDTWDLIYAAAGQ 57

[Close]
BLAST of Lag0030691 vs. NCBI nr
Match: XP_022956575.1 (uncharacterized protein LOC111458270 [Cucurbita moschata])

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 39  TPQSTLSGLGSFSAWSSVLSDGSPN----EPSLPTTPFSGDKNTWDIIFVAAGQ 89
           +PQSTLSG GS+SAWSSV SDGSPN     PS PTTPF GD++TWD+I+ AAGQ
Sbjct: 86  SPQSTLSGFGSWSAWSSVSSDGSPNGPSQAPSPPTTPFGGDEDTWDLIYAAAGQ 139

The following BLAST results are available for this feature:
BLAST of Lag0030691 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464895.13.3e-1272.22PREDICTED: uncharacterized protein LOC103502654 [Cucumis melo] >KAA0051556.1 WAS... [more]
XP_004149945.13.3e-1272.22uncharacterized protein LOC101215147 [Cucumis sativus] >KGN50597.1 hypothetical ... [more]
XP_038893422.11.3e-1170.37uncharacterized protein LOC120082215 [Benincasa hispida][more]
XP_023535272.12.2e-1170.37uncharacterized protein LOC111796750 [Cucurbita pepo subsp. pepo][more]
XP_022956575.12.2e-1170.37uncharacterized protein LOC111458270 [Cucurbita moschata][more]
BLAST of Lag0030691 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0030691.1Lag0030691.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane