Lag0030407 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030407
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	LL-diaminopimelate aminotransferase
Location	chr8: 47009117 .. 47013131 (-)
RNA-Seq Expression	Lag0030407
Synteny	Lag0030407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGCAAATGTTGCATGCTTTCCAAGTTCCTTCATGCATATCCTTGCAGCCCAATACCAAGCTTCATGTTGAAAGGTCATATTTTCATTTCCCCACTCAAATCTCATTTAATTTATTTGGTTCTTGAACTTTTACATTTCAGATTTTAGGTATTTTGATTTAAACATTACCATATAATTTTCTATATTGTATTTAACAACAATTGCGCATGTCATCAAACGTGAACCATGATATATGTCATAAAGTAAATGTTTCTACATCGAATTTATTTGTTATGACATGATACGTGTGGATATAAGAGAAAAAAAACATAAATTTAACAATAAGGACCCAAATGAGTATGTATGAATGCAATTGAGCTAAAATATAAGATGAGAGTTGATGTTGACTTGTCATTTATGTTTTTGTTGATCTAATGCAGTTTGAAGCATGTGAAGATGAATGAAAATGGTAAGACACAGAACATGACTTCTAGATATATGATTAATTATTTGATGTTATTATCGATTTATCGCATTTATAACTATTGATTGCATGAAATGATATATATATATATTATATAACCAACCTAACCTAGCTATACTAATTTTTATTTATCTTTATTAATATTTAAAGCTCAAATCTTCATCCTTCTTATGTCTTTGAATTGATAAAAACGACAACATGAACATAACTCAAAAGGTCTTTGGTTCGAATCTTTAACGTTGTAAAAAAATAAAAACAAAAGGAAAAAAAATTGATACACCTTGCTTCCTTGCTTTAAAAAAAAGGGGAAAAAAAAGTTCGATATGATGTGTGATCTTATGAGATGTGGAAAAAAATAAAGTGTGAATGTGATTGATGGAAATGCACTGTGATGTTGACACGTGTAGGTCATTGTACAAAAGTCATGCGCAGCGTCAATATGGAAAACCTGAGGAGTGGGTATTTGTTCCCTGAGGTACTCATACAAAACAATACGGTCTAATTGTTATTATTTTTAAATTAAGGACTTATTGCACTTTTTTTTTTCTTTTTTTAAATCATCATTATTATTATTATTATTATTTTAAATTAATGACTTATTGCACTTGATTCATCTTCACGGCATCTTCTATTTGTAGATATTTTATGAGTTTGGGATTTATTTTATATAGACTTTTCTAAACAAAATAGAAACAAAATTGCCAACATTAAAAAAATATTGTCTCTATAACATAGAGCTTTAATTTTTCAATAAAAAATAAATAATAAAAAAGAGCTTTAATTCCACGTTTATTTCAAACCAAAAAAAATAAAAATAAAAATAAAAAATAAAAAAGAGCATTCAAATTTGTATTTCAAAAGCATTTTTGAACTTGATAAAGTTTTGGAAACATAAAAATTAAGGACAAACCAGAAAAAAAAAAGTCAAATATTTGTTTTTCTTGTTTTTTTTTTTAAAGGTTTTTCTTGTTTTTTTAAAATGAGAAATCGAGCAACAAAAAATATTATTGAAAACATCTATTTTAAAATAAGTTATTACGATAAATAAGTAGGATGTTTGAGTATATTTTGAGATAGTTTTAACTGAATTAGTCAAATGATCATTTAAATAATGTAATTGATGTAATATTTTTTTATGATCTTATTAATTAATTGTCTGATTTATATTTTTCTTTGCTATAAAAAAAGATATGATGGTTTGGTTATATTTTACTTATTTTTCCTTTATCCAAATTTAAAATTTTAAACTTTCACCTATTAATGACAATTTATACCCAATTTAATCATTTCGTATTAAAATATGATAATTGAAAAATCACATTAAATCGAACATGTTCTTAAACGTGATAAAGTACAAGAAACGATACATGCACACAAGCTTTATAGGGAAAGTGATAGAAAATAAACTAGTTGCAATATTATCCAATAACTTATTTTATTTTTTATTTTTTTAATTTATTTTAACAATCAATTGTGGGTTGTGCTCATTTTGAACCAGATAACTATGCGAGAATACGAACACTCTCAAAGATACCCAGATGCAAAGATAATTAAACTTGGAATAGGTGACACTACACAACCTATACCAGACTGTATTGCTTCGGCTATGGCAAAAGTAAGTCTAACTCGTAAAGTAACATGATTTTTAATAGCTTGTTGGATTAATAAAATTGCAACCCATGATAAACAAACTAATATATAAATATAAACTCGACTTCTTATACCTTGCACGTGTCGAAGAAAACCTTCAAGATTTGTTGAATTTTTTTTTTTTTTTTTTTTTGGAAACAGATTTGTTGAAGTTTATAGTTTTCAAATTCAAATTTCAAATTTGGAGTTAAAAAAAAATAATAATAATAAATAAATAAAATAAAAATAAAATAAAATAAAAGCAATTATATGCTTTGCAAGAGGGATGCCGGCTTCAGCATTTCAAATATGAATAACGTGCTTAATTAAATCCCATGGTCAACATTGGAATGCCAACAACATGACCTCTCTATTTATTTTATTTTTTTTTTCATTTTTGTATTTGGGTAAATTACACGCGAAGGTCACCATCTTGTACTATTATACACTACCAACCTATTTTTGTTGACTTATTTTTCAAACGTGGGACGACAGATTGAACCATCTATATTTATAATGACAATCGGTATTTATTTACTGAGCCAAGTTCGAATTGGGTCATTTAGTAAATTATTGAAAGTGTACTGATTTTTTTTTTTCTTTTTTACGCATATATCCTCCATTTTTTTAATATGCTTGTAAATAATGAACTTATGATCTTTTTAAAAAAACAAAAATTAAAAACATAAAGTTTATATATTTGTTTAAAAAAAGTACCTGAAATAGACAATGAAAATGTTAATGCTTTCAATGCAGAAAGCAATTGCTCTGTCAACTGTTGGCGGCTACAGTGGTTATGGAGATGAGCAGGGCAACATGGTAAATTTGATAGCTTTTTTCAACATAATATGAAATAAATTGCTTTTATAATTTTTCTTTTTTTTTTGGGGCCAATTTTTGTATTTTTCTTTAGGAACTGAGGAAGAGAATCGCAGAAAAGTTTTACGGAACAATGGGCATAAAGGGGGAAGAAGTTTTTGTCTCGGATGGAGCTCAATGTGACATCTCTCGCCTTCAGGTATTTCTTAATAAATACATTTATTAGGGGTGAAGAAAACCGAACCGAACCGAGTCGATTCGGTTCGGTTCGGTTAAGTTTTTATATATCCAGACCGAACCGTACCAAACCGAGTTGGTTCGGTTCGGTTCTTAGTTTTTTACATAAATAGGAATTTTAGGGTTTGTTGTTGTTGCCTTGCCGCCTCTCTTCCACATCCCTTCTCTCTGTTTTCATTTTAGTGGTTACTGATGTTGCTGTTGTCCTCTCACGAACGCCGTCTCTCGCTTAGGGAAAATGGGTTACTTGCTGATGTTGCTGCAAGAACGCCGTCTCTCGCTCTCAATCGTCGGCGTCGCCGCCTCCTCCAACACCAACGCCAACGCCGTCTCTCGCTCTCAGTCGCCTCCTCCTCCAACACCAACGCCAACGCCAACGCCATCTCTCGCTCTCAGTCGCCGTCTCCTCCACCACGAACGTCGTCCCCCCTCTTTCTGTCGCCGTCTCCCCCCTCAGGCTTATGCGTCTGGTATTTGTATTTTGTCATTAATCTCAAACAAAACCCCCAAAGAAACTCCAAAACTCTCAACTTTATGCTCTGCCGTCAACAAAAAAAAATCTCTCCTCAACTCCAAAAATCCTCTTGTCCAGTTCTTCCAAAGACTTCCTCTGCATGTTCATAAAAATCCTAAAAACAATCTCTAAACCTTCAAAACCCCCCGCATTTTCTCGCCATCCCATCAAAACACAGAACCAAATGTAGAAGAAATTTCAATCGATTAGGAAGAAGCAGAGTCCTCAAAAGCGGCGGAATGGAAGTGGGAAAAGAATGTTGACCCAACCCGACCCGACCGGTTCGGGTCTAGTCGGGTCGATTTGTCCGTACAACCGACCCGACCCGCTTTTTTTACACACCTAA

mRNA sequence

ATGTTGAAGCAAATGTTGCATGCTTTCCAAGTTCCTTCATGCATATCCTTGCAGCCCAATACCAAGCTTCATGTTGAAAGTTTGAAGCATGTGAAGATGAATGAAAATGGTCATTGTACAAAAGTCATGCGCAGCGTCAATATGGAAAACCTGAGGAGTGGGTATTTGTTCCCTGAGATAACTATGCGAGAATACGAACACTCTCAAAGATACCCAGATGCAAAGATAATTAAACTTGGAATAGGTGACACTACACAACCTATACCAGACTGTATTGCTTCGGCTATGGCAAAAAAAGCAATTGCTCTGTCAACTGTTGGCGGCTACAGTGGTTATGGAGATGAGCAGGGCAACATGGAACTGAGGAAGAGAATCGCAGAAAAGTTTTACGGAACAATGGGCATAAAGGGGGAAGAAGTTTTTGTCTCGGATGGAGCTCAATGTGACATCTCTCGCCTTCAGTGGTTACTGATGTTGCTGTTGTCCTCTCACGAACGCCGTCTCTCGCTTAGGGAAAATGGGTTACTTGCTGATGTTGCTGCAAGAACGCCGTCTCTCGCTCTCAATCGTCGGCGTCGCCGCCTCCTCCAACACCAACGCCAACGCCGTCTCTCGCTCTCAGTCGCCTCCTCCTCCAACACCAACGCCAACGCCAACGCCATCTCTCGCTCTCAGTCGCCGTCTCCTCCACCACGAACGTCGTCCCCCCTCTTTCTGTCGCCGTCTCCCCCCTCAGGCTTATGCGTCTGGAAGAAGCAGAGTCCTCAAAAGCGGCGGAATGGAAGTGGGAAAAGAATGTTGACCCAACCCGACCCGACCGGTTCGGGTCTAGTCGGGTCGATTTGTCCGTACAACCGACCCGACCCGCTTTTTTTACACACCTAA

Coding sequence (CDS)

ATGTTGAAGCAAATGTTGCATGCTTTCCAAGTTCCTTCATGCATATCCTTGCAGCCCAATACCAAGCTTCATGTTGAAAGTTTGAAGCATGTGAAGATGAATGAAAATGGTCATTGTACAAAAGTCATGCGCAGCGTCAATATGGAAAACCTGAGGAGTGGGTATTTGTTCCCTGAGATAACTATGCGAGAATACGAACACTCTCAAAGATACCCAGATGCAAAGATAATTAAACTTGGAATAGGTGACACTACACAACCTATACCAGACTGTATTGCTTCGGCTATGGCAAAAAAAGCAATTGCTCTGTCAACTGTTGGCGGCTACAGTGGTTATGGAGATGAGCAGGGCAACATGGAACTGAGGAAGAGAATCGCAGAAAAGTTTTACGGAACAATGGGCATAAAGGGGGAAGAAGTTTTTGTCTCGGATGGAGCTCAATGTGACATCTCTCGCCTTCAGTGGTTACTGATGTTGCTGTTGTCCTCTCACGAACGCCGTCTCTCGCTTAGGGAAAATGGGTTACTTGCTGATGTTGCTGCAAGAACGCCGTCTCTCGCTCTCAATCGTCGGCGTCGCCGCCTCCTCCAACACCAACGCCAACGCCGTCTCTCGCTCTCAGTCGCCTCCTCCTCCAACACCAACGCCAACGCCAACGCCATCTCTCGCTCTCAGTCGCCGTCTCCTCCACCACGAACGTCGTCCCCCCTCTTTCTGTCGCCGTCTCCCCCCTCAGGCTTATGCGTCTGGAAGAAGCAGAGTCCTCAAAAGCGGCGGAATGGAAGTGGGAAAAGAATGTTGACCCAACCCGACCCGACCGGTTCGGGTCTAGTCGGGTCGATTTGTCCGTACAACCGACCCGACCCGCTTTTTTTACACACCTAA

Protein sequence

MLKQMLHAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLLMLLLSSHERRLSLRENGLLADVAARTPSLALNRRRRRLLQHQRQRRLSLSVASSSNTNANANAISRSQSPSPPPRTSSPLFLSPSPPSGLCVWKKQSPQKRRNGSGKRMLTQPDPTGSGLVGSICPYNRPDPLFLHT

Homology

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BLAST of Lag0030407 vs. NCBI nr
Match: XP_038884400.1 (aminotransferase ALD1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-65
Identity = 130/158 (82.28%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MLKQML-HAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPE 60
           MLKQML +AFQV SCISLQP +KLH ESLKHVK N++GHCTKVMRSVNMENLR+GYLFPE
Sbjct: 1   MLKQMLDYAFQVSSCISLQPKSKLHFESLKHVKENKSGHCTKVMRSVNMENLRTGYLFPE 60

Query: 61  ITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNM 120
           I  REYEHSQ+YP+A+IIKLGIGDT++PIPDCI SAMAK+A+ LSTV GYSGYGDEQGN 
Sbjct: 61  IARREYEHSQKYPNAEIIKLGIGDTSEPIPDCITSAMAKQALDLSTVKGYSGYGDEQGNK 120

Query: 121 ELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLL 158
            LRKRIAEKFY  M IKGEEVFVSDGAQCDISRLQ LL
Sbjct: 121 ALRKRIAEKFYKNMCIKGEEVFVSDGAQCDISRLQMLL 158

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BLAST of Lag0030407 vs. NCBI nr
Match: TYK06659.1 (putative LL-diaminopimelate aminotransferase [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 3.5e-59
Identity = 122/157 (77.71%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MLKQML-HAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPE 60
           MLKQML +AFQV SC SLQP TKL VESLK  K  +N   TKVMRSVNMENLR+GYLFPE
Sbjct: 1   MLKQMLDYAFQVSSCTSLQPKTKLLVESLKGTKETKNDQWTKVMRSVNMENLRTGYLFPE 60

Query: 61  ITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNM 120
           I+ REYEHS++YPDAKIIKLGIGDT++PIPDCIASAMAK+A+ALSTV GYSGYGDEQG  
Sbjct: 61  ISRREYEHSEKYPDAKIIKLGIGDTSEPIPDCIASAMAKQAMALSTVEGYSGYGDEQGEK 120

Query: 121 ELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWL 157
            LRKRIAEKFY  M +K EEVF+SDGAQCDISR+Q L
Sbjct: 121 ALRKRIAEKFYKNMDVKWEEVFISDGAQCDISRVQML 157

[Close]

BLAST of Lag0030407 vs. NCBI nr
Match: XP_008441250.1 (PREDICTED: probable LL-diaminopimelate aminotransferase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 3.6e-56
Identity = 142/253 (56.13%), Postives = 166/253 (65.61%), Query Frame = 0


Query: 1   MLKQML-HAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPE 60
           MLKQML +AFQV SC SLQP TKL VESLK  K  +N   TKVMRSVNMENLR+GYLFPE
Sbjct: 1   MLKQMLDYAFQVSSCTSLQPKTKLLVESLKGTKETKNDQWTKVMRSVNMENLRTGYLFPE 60

Query: 61  ITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNM 120
           I+ REYEHS++YPDAKIIKLGIGDT++PIPDCIASAMAK+A+ALSTV GYSGYGDEQG  
Sbjct: 61  ISRREYEHSEKYPDAKIIKLGIGDTSEPIPDCIASAMAKQAMALSTVEGYSGYGDEQGEK 120

Query: 121 ELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLLMLLLSSHERRLSLRENGLLADV 180
            LRKRIAEKFY  M +K EEVF+SDGAQCDISR+Q    +L  SH              V
Sbjct: 121 ALRKRIAEKFYKNMDVKWEEVFISDGAQCDISRVQ----MLFGSH------------VTV 180

Query: 181 AARTPSL------ALNRRRRRLLQHQRQRRLSLSVASSSNTNANANAISRSQSPSPPPRT 240
           A + PS       ++   R   LQ Q  +   +     +  N     +S +      PRT
Sbjct: 181 AVQNPSFPAYIDSSVIFGRAGNLQEQNGKYERIVYMECTPQNDFFPDLSNT------PRT 231

Query: 241 SSPLFLSPSPPSG 247
               F SP+ P+G
Sbjct: 241 DIIFFCSPNNPTG 231

[Close]

BLAST of Lag0030407 vs. NCBI nr
Match: XP_022939463.1 (probable LL-diaminopimelate aminotransferase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-55
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 23  LHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIG 82
           LH++S +H   N+ GHCTKV+RS NMENLRSGYLFPEI++REYEHSQ+YP+AKIIKLGIG
Sbjct: 2   LHLQSSEHETENKTGHCTKVVRSANMENLRSGYLFPEISLREYEHSQKYPNAKIIKLGIG 61

Query: 83  DTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFV 142
           DTT+PIPDCIASAMAK+A ALSTV GYSGYGDEQGN  LRKRIAE  YG MGIKGEEVFV
Sbjct: 62  DTTEPIPDCIASAMAKQATALSTVEGYSGYGDEQGNKALRKRIAEMLYGNMGIKGEEVFV 121

Query: 143 SDGAQCDISRLQWLL 158
           SDGAQCDISRLQ LL
Sbjct: 122 SDGAQCDISRLQMLL 136

[Close]

BLAST of Lag0030407 vs. NCBI nr
Match: XP_022152427.1 (probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-55
Identity = 116/157 (73.89%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MLKQMLHAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEI 60
           MLKQM+HA            T L VESL+ V+  E GHCTKV RSVNME L+SGYLFPEI
Sbjct: 1   MLKQMVHA----------SKTNLEVESLRPVEEREIGHCTKVRRSVNMEKLQSGYLFPEI 60

Query: 61  TMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNME 120
           +MREYEHSQ++PDAKII+LGIGDTT+P+P+CIA AM KKAI LSTV GYSGYGDEQGN  
Sbjct: 61  SMREYEHSQKHPDAKIIRLGIGDTTEPVPNCIAFAMTKKAIDLSTVEGYSGYGDEQGNKA 120

Query: 121 LRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLL 158
           LRKRIAEKFY  MGIKGEEVFVSDGAQCDISR+Q LL
Sbjct: 121 LRKRIAEKFYENMGIKGEEVFVSDGAQCDISRIQMLL 147

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BLAST of Lag0030407 vs. ExPASy Swiss-Prot
Match: Q6VMN7 (Aminotransferase ALD1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=ALD1 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-37
Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 40  TKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKK 99
           T V+R+ NME L+ GYLFPEI+++  EH ++YPDAK+I LGIGDTT+PIP  + SAMA+ 
Sbjct: 32  TSVLRNPNMEKLQKGYLFPEISIKREEHLKKYPDAKVISLGIGDTTEPIPSIVTSAMAEY 91

Query: 100 AIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWL 157
           A+ALST  GY GYG EQG+  LRK IA+K Y  MGIK  EVF+SDGAQCDI+RLQ L
Sbjct: 92  ALALSTPEGYQGYGPEQGHKNLRKEIADKVYPDMGIKESEVFISDGAQCDIARLQTL 148

[Close]

BLAST of Lag0030407 vs. ExPASy Swiss-Prot
Match: Q93ZN9 (LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAP PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 74/115 (64.35%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 40  TKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKK 99
           TKV R+ NM  L++GYLFPEI  R   H  +YPDA++I LGIGDTT+PIP+ I SAMAKK
Sbjct: 57  TKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKK 116

Query: 100 AIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQ 155
           A  LST+ GYSGYG EQG   LR  IA+ FYG +GI  ++VFVSDGA+CDISRLQ
Sbjct: 117 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQ 171

[Close]

BLAST of Lag0030407 vs. ExPASy Swiss-Prot
Match: Q10MQ2 (Probable LL-diaminopimelate aminotransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AGD2 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 23  LHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIG 82
           ++V  +      E    TKV R+ NM  L++GYLFPEI  R   H  ++PDAKII LGIG
Sbjct: 43  VNVRCVSSPPATETSFKTKVPRNANMAKLQAGYLFPEIARRRAAHLLKFPDAKIISLGIG 102

Query: 83  DTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFV 142
           DTT+PIPD I +AMAK+A ALSTV GYSGYG EQG  +LR  IA  +Y  +GI+  ++FV
Sbjct: 103 DTTEPIPDVITNAMAKRAHALSTVDGYSGYGAEQGEKKLRAAIAATYYADLGIEETDIFV 162

Query: 143 SDGAQCDISRLQWL 157
           SDGA+CDISRLQ L
Sbjct: 163 SDGAKCDISRLQVL 176

[Close]

BLAST of Lag0030407 vs. ExPASy Swiss-Prot
Match: Q9ZQI7 (Aminotransferase ALD1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALD1 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 8.9e-34
Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 0


Query: 1   MLKQMLHAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEI 60
           M+  M  +   P C S     K  ++     +M + G  TK++R+VN+E L++ YLFPEI
Sbjct: 1   MVSLMFFSSASPLCSSPSKIPKASLD----FEMKKLGGSTKLVRNVNLEKLKNNYLFPEI 60

Query: 61  TMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNME 120
             RE EH +++P+ ++I LG GDTT+PIP+ I S M+  A  LSTV GY GYG EQGN  
Sbjct: 61  NRRELEHIEKHPNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKT 120

Query: 121 LRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLL 158
           LRK IAE FY  + +K  EVFVSDGAQ DISRLQ LL
Sbjct: 121 LRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL 153

[Close]

BLAST of Lag0030407 vs. ExPASy Swiss-Prot
Match: Q6MDE0 (LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=dapL PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 60/115 (52.17%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 42  VMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAI 101
           V R+V++  L+SGYLFPEI  R+ E  +++P A++I LGIGDTTQPIP  I+ AM   A 
Sbjct: 2   VKRNVHLTKLQSGYLFPEINRRKNEFLKKHPSAQLINLGIGDTTQPIPLYISEAMQNFAK 61

Query: 102 ALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWL 157
            L++   Y GYG EQG++ LR+ IAE++Y    I  +EVFVSDG++CD+ RLQ L
Sbjct: 62  QLASEKTYRGYGTEQGSILLREAIAEQYYQGK-IDPQEVFVSDGSKCDVGRLQIL 115

[Close]

BLAST of Lag0030407 vs. ExPASy TrEMBL
Match: A0A5D3C8G9 (Putative LL-diaminopimelate aminotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001410 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 122/157 (77.71%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MLKQML-HAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPE 60
           MLKQML +AFQV SC SLQP TKL VESLK  K  +N   TKVMRSVNMENLR+GYLFPE
Sbjct: 1   MLKQMLDYAFQVSSCTSLQPKTKLLVESLKGTKETKNDQWTKVMRSVNMENLRTGYLFPE 60

Query: 61  ITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNM 120
           I+ REYEHS++YPDAKIIKLGIGDT++PIPDCIASAMAK+A+ALSTV GYSGYGDEQG  
Sbjct: 61  ISRREYEHSEKYPDAKIIKLGIGDTSEPIPDCIASAMAKQAMALSTVEGYSGYGDEQGEK 120

Query: 121 ELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWL 157
            LRKRIAEKFY  M +K EEVF+SDGAQCDISR+Q L
Sbjct: 121 ALRKRIAEKFYKNMDVKWEEVFISDGAQCDISRVQML 157

[Close]

BLAST of Lag0030407 vs. ExPASy TrEMBL
Match: A0A1S3B2Z8 (probable LL-diaminopimelate aminotransferase, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485436 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-56
Identity = 142/253 (56.13%), Postives = 166/253 (65.61%), Query Frame = 0


Query: 1   MLKQML-HAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPE 60
           MLKQML +AFQV SC SLQP TKL VESLK  K  +N   TKVMRSVNMENLR+GYLFPE
Sbjct: 1   MLKQMLDYAFQVSSCTSLQPKTKLLVESLKGTKETKNDQWTKVMRSVNMENLRTGYLFPE 60

Query: 61  ITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNM 120
           I+ REYEHS++YPDAKIIKLGIGDT++PIPDCIASAMAK+A+ALSTV GYSGYGDEQG  
Sbjct: 61  ISRREYEHSEKYPDAKIIKLGIGDTSEPIPDCIASAMAKQAMALSTVEGYSGYGDEQGEK 120

Query: 121 ELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLLMLLLSSHERRLSLRENGLLADV 180
            LRKRIAEKFY  M +K EEVF+SDGAQCDISR+Q    +L  SH              V
Sbjct: 121 ALRKRIAEKFYKNMDVKWEEVFISDGAQCDISRVQ----MLFGSH------------VTV 180

Query: 181 AARTPSL------ALNRRRRRLLQHQRQRRLSLSVASSSNTNANANAISRSQSPSPPPRT 240
           A + PS       ++   R   LQ Q  +   +     +  N     +S +      PRT
Sbjct: 181 AVQNPSFPAYIDSSVIFGRAGNLQEQNGKYERIVYMECTPQNDFFPDLSNT------PRT 231

Query: 241 SSPLFLSPSPPSG 247
               F SP+ P+G
Sbjct: 241 DIIFFCSPNNPTG 231

[Close]

BLAST of Lag0030407 vs. ExPASy TrEMBL
Match: A0A6J1FLQ3 (probable LL-diaminopimelate aminotransferase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445359 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.0e-56
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 23  LHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIG 82
           LH++S +H   N+ GHCTKV+RS NMENLRSGYLFPEI++REYEHSQ+YP+AKIIKLGIG
Sbjct: 2   LHLQSSEHETENKTGHCTKVVRSANMENLRSGYLFPEISLREYEHSQKYPNAKIIKLGIG 61

Query: 83  DTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFV 142
           DTT+PIPDCIASAMAK+A ALSTV GYSGYGDEQGN  LRKRIAE  YG MGIKGEEVFV
Sbjct: 62  DTTEPIPDCIASAMAKQATALSTVEGYSGYGDEQGNKALRKRIAEMLYGNMGIKGEEVFV 121

Query: 143 SDGAQCDISRLQWLL 158
           SDGAQCDISRLQ LL
Sbjct: 122 SDGAQCDISRLQMLL 136

[Close]

BLAST of Lag0030407 vs. ExPASy TrEMBL
Match: A0A6J1DG87 (probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020164 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.6e-56
Identity = 116/157 (73.89%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MLKQMLHAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEI 60
           MLKQM+HA            T L VESL+ V+  E GHCTKV RSVNME L+SGYLFPEI
Sbjct: 1   MLKQMVHA----------SKTNLEVESLRPVEEREIGHCTKVRRSVNMEKLQSGYLFPEI 60

Query: 61  TMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNME 120
           +MREYEHSQ++PDAKII+LGIGDTT+P+P+CIA AM KKAI LSTV GYSGYGDEQGN  
Sbjct: 61  SMREYEHSQKHPDAKIIRLGIGDTTEPVPNCIAFAMTKKAIDLSTVEGYSGYGDEQGNKA 120

Query: 121 LRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLL 158
           LRKRIAEKFY  MGIKGEEVFVSDGAQCDISR+Q LL
Sbjct: 121 LRKRIAEKFYENMGIKGEEVFVSDGAQCDISRIQMLL 147

[Close]

BLAST of Lag0030407 vs. ExPASy TrEMBL
Match: A0A6J1JS40 (probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489291 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 23  LHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIG 82
           LH++S KH   N+ GHCTKV+RS NMENLRSGYLFPEI++REYEHSQ+YP+AKIIKLGIG
Sbjct: 2   LHLQSSKHETENKTGHCTKVVRSANMENLRSGYLFPEISLREYEHSQKYPNAKIIKLGIG 61

Query: 83  DTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFV 142
           DTT+PIPDCI SAMAK+A ALSTV GYSGYGDEQG+  LRKRIAE  YG MGIKGEEVFV
Sbjct: 62  DTTEPIPDCITSAMAKQATALSTVEGYSGYGDEQGSKALRKRIAEMLYGNMGIKGEEVFV 121

Query: 143 SDGAQCDISRLQWLL 158
           SDGAQCDISRLQ LL
Sbjct: 122 SDGAQCDISRLQMLL 136

[Close]

BLAST of Lag0030407 vs. TAIR 10
Match: AT4G33680.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36
Identity = 74/115 (64.35%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 40  TKVMRSVNMENLRSGYLFPEITMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKK 99
           TKV R+ NM  L++GYLFPEI  R   H  +YPDA++I LGIGDTT+PIP+ I SAMAKK
Sbjct: 57  TKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKK 116

Query: 100 AIALSTVGGYSGYGDEQGNMELRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQ 155
           A  LST+ GYSGYG EQG   LR  IA+ FYG +GI  ++VFVSDGA+CDISRLQ
Sbjct: 117 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQ 171

[Close]

BLAST of Lag0030407 vs. TAIR 10
Match: AT2G13810.1 (AGD2-like defense response protein 1 )

HSP 1 Score: 145.6 bits (366), Expect = 6.3e-35
Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 0


Query: 1   MLKQMLHAFQVPSCISLQPNTKLHVESLKHVKMNENGHCTKVMRSVNMENLRSGYLFPEI 60
           M+  M  +   P C S     K  ++     +M + G  TK++R+VN+E L++ YLFPEI
Sbjct: 1   MVSLMFFSSASPLCSSPSKIPKASLD----FEMKKLGGSTKLVRNVNLEKLKNNYLFPEI 60

Query: 61  TMREYEHSQRYPDAKIIKLGIGDTTQPIPDCIASAMAKKAIALSTVGGYSGYGDEQGNME 120
             RE EH +++P+ ++I LG GDTT+PIP+ I S M+  A  LSTV GY GYG EQGN  
Sbjct: 61  NRRELEHIEKHPNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKT 120

Query: 121 LRKRIAEKFYGTMGIKGEEVFVSDGAQCDISRLQWLL 158
           LRK IAE FY  + +K  EVFVSDGAQ DISRLQ LL
Sbjct: 121 LRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL 153

The following BLAST results are available for this feature:

BLAST of Lag0030407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884400.1	2.5e-65	82.28	aminotransferase ALD1, chloroplastic-like [Benincasa hispida]	[more]
TYK06659.1	3.5e-59	77.71	putative LL-diaminopimelate aminotransferase [Cucumis melo var. makuwa]	[more]
XP_008441250.1	3.6e-56	56.13	PREDICTED: probable LL-diaminopimelate aminotransferase, chloroplastic isoform X...	[more]
XP_022939463.1	1.0e-55	81.48	probable LL-diaminopimelate aminotransferase, chloroplastic [Cucurbita moschata]	[more]
XP_022152427.1	1.8e-55	73.89	probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 [Momordic...	[more]

BLAST of Lag0030407 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6VMN7	1.0e-37	64.10	Aminotransferase ALD1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=ALD1 P...	[more]
Q93ZN9	1.6e-35	64.35	LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q10MQ2	2.1e-35	56.72	Probable LL-diaminopimelate aminotransferase, chloroplastic OS=Oryza sativa subs...	[more]
Q9ZQI7	8.9e-34	50.32	Aminotransferase ALD1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALD1 PE=...	[more]
Q6MDE0	1.7e-24	52.17	LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila (strain UWE25)...	[more]

BLAST of Lag0030407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C8G9	1.7e-59	77.71	Putative LL-diaminopimelate aminotransferase OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3B2Z8	1.7e-56	56.13	probable LL-diaminopimelate aminotransferase, chloroplastic isoform X2 OS=Cucumi...	[more]
A0A6J1FLQ3	5.0e-56	81.48	probable LL-diaminopimelate aminotransferase, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1DG87	8.6e-56	73.89	probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 OS=Momord...	[more]
A0A6J1JS40	1.9e-55	80.74	probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1 OS=Cucurb...	[more]

BLAST of Lag0030407 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33680.1	1.2e-36	64.35	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT2G13810.1	6.3e-35	50.32	AGD2-like defense response protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 86..157 e-value: 4.1E-25 score: 90.5
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 56..85 e-value: 4.1E-25 score: 90.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..228
None	No IPR available	PANTHER	PTHR43144:SF4	LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC-RELATED	coord: 9..157
IPR019942	LL-diaminopimelate aminotransferase/aminotransferase ALD1	PANTHER	PTHR43144	AMINOTRANSFERASE	coord: 9..157
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 54..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030407.1	Lag0030407.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity
molecular_function	GO:0003824	catalytic activity