Lag0030405 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0030405
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr8: 47002888 .. 47003268 (+)
RNA-Seq ExpressionLag0030405
SyntenyLag0030405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTCATTTTCCTGAACAGCCAAGCATAGCTGGAGCGTTTGGCTTCGTAATTAGGGCTCGAATCGGTCTTGTTGGCCTTCTCTTTTTCTTCCTTCTCGAATTTCTCGTGGTTCATCTTCCTCATTACGTAGGCTTCAGCAAGAGAGTAATTCATGGCGTCGAGGAAGCTTTTTGCTGGATTAGGAAGAGAGAAATCAGGATTGAATTGGTTGGGGAAGAGAAGGGAGAAATTTATAGGGAGAGGGATTTGGAATTTGCTTGGAGAGTAAGGAAAGGAAAGAGAGACGAGAGTGATAGGCTTCGTAGGTTGGCGGATGAATGTGAAGCGGGCTTGACGTACGCGCTTACACAGGCGATGGCCTTGTTCATTCAGTAA

mRNA sequence

ATGGATCTTCATTTTCCTGAACAGCCAAGCATAGCTGGAGCGTTTGGCTTCGTAATTAGGGCTCGAATCGGTCTTGTTGGCCTTCTCTTTTTCTTCCTTCTCGAATTTCTCGTGGTTCATCTTCCTCATTACGTAGGCTTCAGCAAGAGAGTAATTCATGGCGTCGAGGAAGCTTTTTGCTGGATTAGGAAGAGAGAAATCAGGATTGAATTGGTTGGGGAAGAGAAGGGAGAAATTTATAGGGAGAGGGATTTGGAATTTGCTTGGAGAGTAAGGAAAGGAAAGAGAGACGAGAGTGATAGGCTTCGTAGGTTGGCGGATGAATGTGAAGCGGGCTTGACGTACGCGCTTACACAGGCGATGGCCTTGTTCATTCAGTAA

Coding sequence (CDS)

ATGGATCTTCATTTTCCTGAACAGCCAAGCATAGCTGGAGCGTTTGGCTTCGTAATTAGGGCTCGAATCGGTCTTGTTGGCCTTCTCTTTTTCTTCCTTCTCGAATTTCTCGTGGTTCATCTTCCTCATTACGTAGGCTTCAGCAAGAGAGTAATTCATGGCGTCGAGGAAGCTTTTTGCTGGATTAGGAAGAGAGAAATCAGGATTGAATTGGTTGGGGAAGAGAAGGGAGAAATTTATAGGGAGAGGGATTTGGAATTTGCTTGGAGAGTAAGGAAAGGAAAGAGAGACGAGAGTGATAGGCTTCGTAGGTTGGCGGATGAATGTGAAGCGGGCTTGACGTACGCGCTTACACAGGCGATGGCCTTGTTCATTCAGTAA

Protein sequence

MDLHFPEQPSIAGAFGFVIRARIGLVGLLFFFLLEFLVVHLPHYVGFSKRVIHGVEEAFCWIRKREIRIELVGEEKGEIYRERDLEFAWRVRKGKRDESDRLRRLADECEAGLTYALTQAMALFIQ
Homology
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BLAST of Lag0030405 vs. NCBI nr
Match: KGN63121.1 (hypothetical protein Csa_022555 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 1  MDLHFPEQPSIAGAFGFVIRARIGLVGL---LFFFLLEFLVVHLPHYVGFSKRVI 53
          M+LHFP+QP+       V+RARI  + L    FFFLL+ L +H PHYVGF KRV+
Sbjct: 26 MNLHFPQQPAGPLFLRIVVRARISTLLLSIFSFFFLLQLLAIHFPHYVGFGKRVV 80

The following BLAST results are available for this feature:
BLAST of Lag0030405 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63121.11.8e-0452.73hypothetical protein Csa_022555 [Cucumis sativus][more]
BLAST of Lag0030405 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0030405.1Lag0030405.1mRNA