Lag0030388 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAGCGTCCTTTAGGTGGATACTACAGCTACACAAGGACGTTCCGAAAGCGGCAAAATTCTACTCAGAGGGCTTGGACTTCACTGTTAATGTCTGCACTCTCCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAAGTAACTACACAATTTTTGGTTCTCTACAATTGATTAATCCATGCATTTGATGTGCTTTGTTGATATGTAAACACTAAACAGAATGTGCCATAGTTAGATGCCTTGTTTGTGTTCGATGTTTTGCCTTCGAGAAATTAAGAATGAAAAACGACCCATTACTATTAGCCAAGTGTGGTTTCTTTGTATGTGGTTCTATTCGTACAGAGGTTCATCAGACCAATGGGCAACGAGTATGGTATATAAATGGTTCAATTCATGTTATTGATTACAGAAGATATATGGTGTATCTGTCAGGGAAGAATGAACCAGGGAGATACGGAAGAAAGCTTTATGTTGGTTCTATTGTTGTGGAAGATATCTGAATTTTAAGACGAGAACAACTTTTTCGTTTACTTGGTTGCACGTGGATTGCTGGACATTTCATGAAAATTCTGGTGTTTGTTAAATATATTGCTCGTGAAGTACTATTTATTACATTGTTTCCCTTTTGAGTTGGCTAATTGTGAGGTATTGAGTGTTTAAATTGTGGCATGGACTTGGTTTTGTCCTTAATGTGAATTATCGAAGAAAGCAACTTGAGTCGTATTGTGTTGAAATAAACTTGTTCTCCCAGTTTGATTTAGAAACTTGAGGTTTTAATTTCACATAGTTAGATGTTTTGGTCTCGTTTAGATGCTCTAGTTTCTAACTTGGGGTCACAGTGACCATATCGTGCAGCAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAACACAGTGACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTTCCATAAAGTATGAAATACACGGAAAGGTACGAACTCCCTACCCCCTTCCTCTTGAATCATAAATGATTAAGCTTTTAAAATGTCAATTGCTTGCTTCAGGTTGCATCCATGCGATGTATTGATGGCCATATGTTGGGCCTTTATGAACCAACATAAGAGCTCAGAGTTAACTTTCTTAAATACTAGCAACATATGGTGGCAGCGTTGTGCTTATGGTTTCTTCAACTTCACCAAAGTCAAGGAGAAGACATGGGATGTATTGTTTTTCTTCGGATTTCTTTGA ATGGCAGCAGCGTCCTTTAGGTGGATACTACAGCTACACAAGGACGTTCCGAAAGCGGCAAAATTCTACTCAGAGGGCTTGGACTTCACTGTTAATGTCTGCACTCTCCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAAATGCCTTGTTTGTGTTCGATGTTTTGCCTTCGAGAAATTAAGAATGAAAAACGACCCATTACTATTAGCCAAGTGTGGTTTCTTTGTATGTGGTTCTATTCGTACAGAGGTTCATCAGACCAATGGGCAACGAGTATGTGACCATATCGTGCAGCAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAACACAGTGACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTTCCATAAAGTTGCATCCATGCGATGTATTGATGGCCATATGTTGGGCCTTTATGAACCAACATAAGAGCTCAGAGTTAACTTTCTTAAATACTAGCAACATATGGTGGCAGCGTTGTGCTTATGGTTTCTTCAACTTCACCAAAGTCAAGGAGAAGACATGGGATGTATTGTTTTTCTTCGGATTTCTTTGA ATGGCAGCAGCGTCCTTTAGGTGGATACTACAGCTACACAAGGACGTTCCGAAAGCGGCAAAATTCTACTCAGAGGGCTTGGACTTCACTGTTAATGTCTGCACTCTCCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAAATGCCTTGTTTGTGTTCGATGTTTTGCCTTCGAGAAATTAAGAATGAAAAACGACCCATTACTATTAGCCAAGTGTGGTTTCTTTGTATGTGGTTCTATTCGTACAGAGGTTCATCAGACCAATGGGCAACGAGTATGTGACCATATCGTGCAGCAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAACACAGTGACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTTCCATAAAGTTGCATCCATGCGATGTATTGATGGCCATATGTTGGGCCTTTATGAACCAACATAAGAGCTCAGAGTTAACTTTCTTAAATACTAGCAACATATGGTGGCAGCGTTGTGCTTATGGTTTCTTCAACTTCACCAAAGTCAAGGAGAAGACATGGGATGTATTGTTTTTCTTCGGATTTCTTTGA MAAASFRWILQLHKDVPKAAKFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSKCLVCVRCFAFEKLRMKNDPLLLAKCGFFVCGSIRTEVHQTNGQRVCDHIVQQKGYSSLLSFTVTDINNTVTKLMAMGAELDGSIKLHPCDVLMAICWAFMNQHKSSELTFLNTSNIWWQRCAYGFFNFTKVKEKTWDVLFFFGFL Homology
BLAST of Lag0030388 vs. NCBI nr
Match: KAG7033382.1 (hypothetical protein SDJN02_07438, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 233.0 bits (593), Expect = 2.2e-57 Identity = 123/188 (65.43%), Postives = 130/188 (69.15%), Query Frame = 0
BLAST of Lag0030388 vs. NCBI nr
Match: XP_008441281.1 (PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_008441282.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_008441284.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_008441285.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_008441286.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_011649932.1 uncharacterized protein LOC101214305 isoform X2 [Cucumis sativus] >XP_016899422.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_016899423.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_016899424.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >XP_016899425.1 PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo] >KAA0031909.1 Lactoylglutathione lyase / glyoxalase I family protein [Cucumis melo var. makuwa] >TYK06698.1 Lactoylglutathione lyase / glyoxalase I family protein [Cucumis melo var. makuwa]) HSP 1 Score: 162.2 bits (409), Expect = 4.8e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. NCBI nr
Match: XP_021645823.1 (uncharacterized protein LOC110639259 isoform X1 [Hevea brasiliensis] >XP_021645824.1 uncharacterized protein LOC110639259 isoform X1 [Hevea brasiliensis]) HSP 1 Score: 162.2 bits (409), Expect = 4.8e-36 Identity = 94/163 (57.67%), Postives = 104/163 (63.80%), Query Frame = 0
BLAST of Lag0030388 vs. NCBI nr
Match: XP_004138631.3 (uncharacterized protein LOC101214305 isoform X1 [Cucumis sativus] >KAE8652254.1 hypothetical protein Csa_021821 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 4.8e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. NCBI nr
Match: XP_008441276.1 (PREDICTED: uncharacterized protein LOC103485457 isoform X2 [Cucumis melo]) HSP 1 Score: 162.2 bits (409), Expect = 4.8e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. ExPASy TrEMBL
Match: A0A1S4DTV3 (uncharacterized protein LOC103485457 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. ExPASy TrEMBL
Match: A0A1S4DTU7 (uncharacterized protein LOC103485457 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. ExPASy TrEMBL
Match: A0A5D3C6B5 (Lactoylglutathione lyase / glyoxalase I family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001930 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. ExPASy TrEMBL
Match: A0A0A0LQS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404930 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. ExPASy TrEMBL
Match: A0A1S3B3T9 (uncharacterized protein LOC103485457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 90/139 (64.75%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Lag0030388 vs. TAIR 10
Match: AT1G64185.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 136.0 bits (341), Expect = 3.4e-32 Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of Lag0030388 vs. TAIR 10
Match: AT5G41650.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 134.8 bits (338), Expect = 7.6e-32 Identity = 75/139 (53.96%), Postives = 85/139 (61.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|