Lag0030352 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGACCACCTGCTCCATCAGTTGACGGCGACCGCCATTTTCATTTACCAACTTCGTCGCCAAATCCGGCGGTCAAACCACGGTACGCGCATTCCCTTTCATATAATTGCAGAACCCATTTCGCCCTAATCCCCAATTCTTCATTCTCATTTCTCTTTCTTCACTCTCGCTCTCCCCGCATTCAGAATTATGGACAAAACCGCATTGTACGATAAGGTGTTCAAGCAGGTCGACGGCGACGGCGACGGGAAGCTGTCTCCTCCGGAGCTGCAGCGGTGCATGGCGGCCGTCGGGGGAGCTTGACGCTGCAGGAGGCGGAGATGGTTGTGAAGAATTTGGATTCCGACGGTGATGGGTTGGTGGGATGGGCTGAATTTGTTGCGTTTGTGGAAGGAGTGGAAGAGGAAGAGAAAGTGAGTGACTTGAAGGAGGCGTTTAGGATGTATGAAATGGATGGCTGTGGCTTCATAACGACCAAGAGTTTGAAGAGAATGTTGAGTAGGCTTGGGGAGTCGAGGAGCATTGAAGAATGCAAGAAAATGATTGCTAAATTTGATCTCGATTCTGATGGTGTTCTTAACTTTGATGAGTTCAAGTTCATGATGTCTTAA ATGGTCGACCACCTGCTCCATCAGTTGACGGCGACCGCCATTTTCATTTACCAACTTCGTCGCCAAATCCGGCGGTCAAACCACGGTGTTCAAGCAGGTCGACGGCGACGGCGACGGGAAGCTGTCTCCTCCGGAGCTGCAGCGGTGCATGGCGGCCGTCGGGGGAGCTTGACGCTGCAGGAGGCGGAGATGGTTGTGAAGAATTTGGATTCCGACGGTGATGGGTTGGTGGGATGGGCTGAATTTGTTGCGTTTGTGGAAGGAGTGGAAGAGGAAGAGAAAGTGAGTGACTTGAAGGAGGCGTTTAGGATGTATGAAATGGATGGCTGTGGCTTCATAACGACCAAGAGTTTGAAGAGAATGTTGAGTAGGCTTGGGGAGTCGAGGAGCATTGAAGAATGCAAGAAAATGATTGCTAAATTTGATCTCGATTCTGATGGTGTTCTTAACTTTGATGAGTTCAAGTTCATGATGTCTTAA ATGGTCGACCACCTGCTCCATCAGTTGACGGCGACCGCCATTTTCATTTACCAACTTCGTCGCCAAATCCGGCGGTCAAACCACGGTGTTCAAGCAGGTCGACGGCGACGGCGACGGGAAGCTGTCTCCTCCGGAGCTGCAGCGGTGCATGGCGGCCGTCGGGGGAGCTTGACGCTGCAGGAGGCGGAGATGGTTGTGAAGAATTTGGATTCCGACGGTGATGGGTTGGTGGGATGGGCTGAATTTGTTGCGTTTGTGGAAGGAGTGGAAGAGGAAGAGAAAGTGAGTGACTTGAAGGAGGCGTTTAGGATGTATGAAATGGATGGCTGTGGCTTCATAACGACCAAGAGTTTGAAGAGAATGTTGAGTAGGCTTGGGGAGTCGAGGAGCATTGAAGAATGCAAGAAAATGATTGCTAAATTTGATCTCGATTCTGATGGTGTTCTTAACTTTGATGAGTTCAAGTTCATGATGTCTTAA MVDHLLHQLTATAIFIYQLRRQIRRSNHGVQAGRRRRRREAVSSGAAAVHGGRRGSLTLQEAEMVVKNLDSDGDGLVGWAEFVAFVEGVEEEEKVSDLKEAFRMYEMDGCGFITTKSLKRMLSRLGESRSIEECKKMIAKFDLDSDGVLNFDEFKFMMS Homology
BLAST of Lag0030352 vs. NCBI nr
Match: XP_023550775.1 (putative calcium-binding protein CML19 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.7 bits (509), Expect = 9.6e-48 Identity = 123/200 (61.50%), Postives = 133/200 (66.50%), Query Frame = 0
BLAST of Lag0030352 vs. NCBI nr
Match: XP_022133861.1 (putative calcium-binding protein CML19 [Momordica charantia]) HSP 1 Score: 198.7 bits (504), Expect = 3.7e-47 Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Lag0030352 vs. NCBI nr
Match: XP_022955599.1 (putative calcium-binding protein CML19 [Cucurbita moschata] >XP_022955608.1 putative calcium-binding protein CML19 [Cucurbita moschata] >KAG6602674.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033361.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45 Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Lag0030352 vs. NCBI nr
Match: XP_023543960.1 (putative calcium-binding protein CML19 [Cucurbita pepo subsp. pepo] >XP_023543968.1 putative calcium-binding protein CML19 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45 Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Lag0030352 vs. NCBI nr
Match: XP_022938684.1 (putative calcium-binding protein CML19 [Cucurbita moschata] >XP_023550776.1 putative calcium-binding protein CML19 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7015957.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45 Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Lag0030352 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-22 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Lag0030352 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22 Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Lag0030352 vs. ExPASy Swiss-Prot
Match: Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.5e-22 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0
BLAST of Lag0030352 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.0e-20 Identity = 50/102 (49.02%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of Lag0030352 vs. ExPASy Swiss-Prot
Match: Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19 Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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