Lag0030290 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACATCGAATCGGTGTCCGGAGGAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAATTACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAACACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCTTAAAGAAAAGGAAGAACTCAGGCGAGTTTCCTTCACTAAACTATATGGATCCGCCTTCAAAGTTGAAACAACAACTCCACGTTACGATATTTGA ATGTCGACATCGAATCGGTGTCCGGAGGAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAATTACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAACACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCTTAAAGAAAAGGAAGAACTCAGGCGAGTTTCCTTCACTAAACTATATGGATCCGCCTTCAAAGTTGAAACAACAACTCCACGTTACGATATTTGA ATGTCGACATCGAATCGGTGTCCGGAGGAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAATTACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAACACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCTTAAAGAAAAGGAAGAACTCAGGCGAGTTTCCTTCACTAAACTATATGGATCCGCCTTCAAAGTTGAAACAACAACTCCACGTTACGATATTTGA MSTSNRCPEEEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAELHGELYNIEAGTVPLVNYEANTNSDRPTSKNRETLKEKEELRRVSFTKLYGSAFKVETTTPRYDI Homology
BLAST of Lag0030290 vs. NCBI nr
Match: XP_031277790.1 (transcription factor DIVARICATA-like [Pistacia vera]) HSP 1 Score: 86.7 bits (213), Expect = 1.6e-13 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Lag0030290 vs. NCBI nr
Match: KAB5540892.1 (hypothetical protein DKX38_013866 [Salix brachista]) HSP 1 Score: 84.3 bits (207), Expect = 7.9e-13 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Lag0030290 vs. NCBI nr
Match: KAG5238313.1 (syringolide-induced protein [Salix suchowensis]) HSP 1 Score: 84.3 bits (207), Expect = 7.9e-13 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Lag0030290 vs. NCBI nr
Match: KAB5520377.1 (hypothetical protein DKX38_024696 [Salix brachista]) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Lag0030290 vs. NCBI nr
Match: XP_024190861.1 (transcription factor DIVARICATA [Rosa chinensis] >PRQ43006.1 putative transcription factor MYB/SANT family [Rosa chinensis]) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Lag0030290 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Lag0030290 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of Lag0030290 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09 Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of Lag0030290 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08 Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of Lag0030290 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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