Lag0030153 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTGAATTCAAACAGGTGAAATTATCAAGTGCAAATGATTTTGGTCAACTGGGCGATGGAACTGAGGAAAAGAGCAAAGAACCAAAGAAAGTGAAGCAATTGCAAGCTAAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTACAGAACCTCGTGAGAATGATGGCTCCATTTCAACTAGTTGACTCTGGATTTGGGGACAAAATCAGGCTTTAATTTATTTGTTTTAAATGTTGATATTCTTTTATAAACTTCTCTGCATTTTCAGCTACAACTCTCTTTTCACGGGATCCAATTTGCCTTGCTTATTTTGGTGAGCCTTCACACCAAAAACGGTATGTATCTAACGTTTAGTAGGTGAATATCACACATCTATCTTGTATATATTTAAAATTTTTAAAATGTTATTAATTTATCAGTACTTTTTCACTTTTTCTTCTCTCTTTTATTTTATTGTACCAATACTGAGCCTAGTTAATGTATTTAATCAGTCCTCTCATTTATTCTATTCCATTCTTGCATCTTCCTCTATGTGAGAGGCGAGTGAGGCATCCATCATTTTGACCACCCTTGGGAAGACTTTATCTTATTTGCTCAAAAAAAATTCACAGTATCCTCAGATCCTTGGCTTCAACTAATTCAATGTACTTGCTGTGTCGTTAATTTGTTTCTCTTCTCTATGTTGAAGCTCCTCTAGGATTCAACAGTATTGTGCGATAAAATAGAACTGTCTTTGGCTAATATAGAATTTAATGTTGAATTAACTTATGTTTTAACATGGTATAAAATTTTAGTGAAGTTGATTTCTACTCGTATACATGTGGTGATGCTACCGTATATTGGAAATCTATCCTACTAAGTACTAACTGAGTTGGAAGTTGGAGAGAACCTTGAGTTTTTATCTAGTTTCCTGCCACCTCAATAATAATACAATCCCTATTCTGGTTGACCAGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACTTCCGAAGGTCTACAAGGAGTTCGCATTATAAGTGCTTATGCAAACTTCATTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGGTGAGGTGTAAATGATCCAAAGGACTAAATAACTGGAAAAGAAGTTTTTATACTTAAGTTTGTGAACTGTGGTTATCCACAGATCACATAGATCTGAAGGTTTGCAACGGGGCTAGGAGTTTGAAAATTATACCAAGCTAA ATGGCTCTTGAATTCAAACAGGTGAAATTATCAAGTGCAAATGATTTTGGTCAACTGGGCGATGGAACTGAGGAAAAGAGCAAAGAACCAAAGAAAGTGAAGCAATTGCAAGCTAAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTACAGAACCTCCTACAACTCTCTTTTCACGGGATCCAATTTGCCTTGCTTATTTTGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACTTCCGAAGGTCTACAAGGAGTTCGCATTATAAGTGCTTATGCAAACTTCATTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGATCACATAGATCTGAAGGTTTGCAACGGGGCTAGGAGTTTGAAAATTATACCAAGCTAA ATGGCTCTTGAATTCAAACAGGTGAAATTATCAAGTGCAAATGATTTTGGTCAACTGGGCGATGGAACTGAGGAAAAGAGCAAAGAACCAAAGAAAGTGAAGCAATTGCAAGCTAAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTACAGAACCTCCTACAACTCTCTTTTCACGGGATCCAATTTGCCTTGCTTATTTTGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACTTCCGAAGGTCTACAAGGAGTTCGCATTATAAGTGCTTATGCAAACTTCATTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGATCACATAGATCTGAAGGTTTGCAACGGGGCTAGGAGTTTGAAAATTATACCAAGCTAA MALEFKQVKLSSANDFGQLGDGTEEKSKEPKKVKQLQAKFVKSVSCGAHCTAAITEPPTTLFSRDPICLAYFGYNEYGQLGRGVTSEGLQGVRIISAYANFIDEAPELVKITKVSCGEYHSAAISENDHIDLKVCNGARSLKIIPS Homology
BLAST of Lag0030153 vs. NCBI nr
Match: KAG6602541.1 (Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.5 bits (441), Expect = 6.8e-40 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lag0030153 vs. NCBI nr
Match: KAG7033219.1 (RCC1 and BTB domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174.5 bits (441), Expect = 6.8e-40 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lag0030153 vs. NCBI nr
Match: XP_023554245.1 (ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554254.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554263.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554270.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.5 bits (441), Expect = 6.8e-40 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lag0030153 vs. NCBI nr
Match: XP_022954542.1 (ultraviolet-B receptor UVR8 [Cucurbita moschata]) HSP 1 Score: 174.5 bits (441), Expect = 6.8e-40 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lag0030153 vs. NCBI nr
Match: XP_022990753.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima]) HSP 1 Score: 174.1 bits (440), Expect = 8.9e-40 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Lag0030153 vs. ExPASy Swiss-Prot
Match: Q15751 (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 6.7e-06 Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0
BLAST of Lag0030153 vs. ExPASy Swiss-Prot
Match: F2Z461 (E3 ISG15--protein ligase Herc6 OS=Mus musculus OX=10090 GN=Herc6 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.7e-06 Identity = 36/117 (30.77%), Postives = 52/117 (44.44%), Query Frame = 0
BLAST of Lag0030153 vs. ExPASy Swiss-Prot
Match: Q7ZZC8 (Serine/threonine-protein kinase Nek9 OS=Xenopus laevis OX=8355 GN=nek9 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.5e-05 Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Lag0030153 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.3e-05 Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of Lag0030153 vs. ExPASy Swiss-Prot
Match: Q8TD19 (Serine/threonine-protein kinase Nek9 OS=Homo sapiens OX=9606 GN=NEK9 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 7.4e-05 Identity = 34/115 (29.57%), Postives = 54/115 (46.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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