Lag0029961 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029961
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr8: 43418127 .. 43418816 (-)
RNA-Seq Expression	Lag0029961
Synteny	Lag0029961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATGGAAAAAGAACAGATACAAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAGAGAGAGTGCAATTCGATTGGAGAGAAAACGGTTATTCGGAAGCAAAGTAGAAGAGTTGCGGGAAGACGTCGAGCGGACGCAAAAGTACGACCAGAAACGAGAGAGGAAGCAGTTCAAGAAAGTCCAAAAGTGTTTTCGGGTAAGGGATCATTGAACAAGTATGAGAAGATTGATCCTCAATTGGGGGATGGGTGTACGAAGGGGAGAGAAAGAAGGCGAGGCCGGCGCAATCAACATCAACGATGGAAGTTACACAGGAAAAATGGAAAAATCGAGGAGCAAAAATGGAAGGACAAGATTTTGGCGAATATAGCAAATGAGCAAGAATGTCGTCAGGTGAAGAAGAGGCAAAACGGACGACTCCGACGATGGAAGTTTCATAAGGAAAAGGAAGAAAAAGCCGAGAGGGAAGGGACGAAAGAAAACACGCCGGCGGTCACATGGTCGGAAAAGCGAGACAGGGGACAGACGAAGAAGAGATGGAGGAATAACTGGCCGACGATCACATGGCTGGAAAAACAAGTGGCAAGTGGAGGAAGAACTCGTCGCAGGCAGTTTGGCGTCAACAGCAAGGTGGGCGGCGGTGGAAGGCTAAAGGACGGAGGAGGAAAAGAAGGCAGGGGAAACGGTTAG

mRNA sequence

ATGCAGATGGAAAAAGAACAGATACAAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAGAGAGAGTGCAATTCGATTGGAGAGAAAACGGTTATTCGGAAGCAAAGTAGAAGAGTTGCGGGAAGACGTCGAGCGGACGCAAAAGTACGACCAGAAACGAGAGAGGAAGCAGTTCAAGAAAGTCCAAAAGTGTTTTCGGGTAAGGGATCATTGAACAAGTATGAGAAGATTGATCCTCAATTGGGGGATGGGTGTACGAAGGGGAGAGAAAGAAGGCGAGGCCGGCGCAATCAACATCAACGATGGAAGTTACACAGGAAAAATGGAAAAATCGAGGAGCAAAAATGGAAGGACAAGATTTTGGCGAATATAGCAAATGAGCAAGAATGTCGTCAGGTGAAGAAGAGGCAAAACGGACGACTCCGACGATGGAAGTTTCATAAGGAAAAGGAAGAAAAAGCCGAGAGGGAAGGGACGAAAGAAAACACGCCGGCGGTCACATGGTCGGAAAAGCGAGACAGGGGACAGACGAAGAAGAGATGGAGGAATAACTGGCCGACGATCACATGGCTGGAAAAACAAGTGGCAAGTGGAGGAAGAACTCGTCGCAGGCAGTTTGGCGTCAACAGCAAGGTGGGCGGCGGTGGAAGGCTAAAGGACGGAGGAGGAAAAGAAGGCAGGGGAAACGGTTAG

Coding sequence (CDS)

ATGCAGATGGAAAAAGAACAGATACAAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAGAGAGAGTGCAATTCGATTGGAGAGAAAACGGTTATTCGGAAGCAAAGTAGAAGAGTTGCGGGAAGACGTCGAGCGGACGCAAAAGTACGACCAGAAACGAGAGAGGAAGCAGTTCAAGAAAGTCCAAAAGTGTTTTCGGGTAAGGGATCATTGAACAAGTATGAGAAGATTGATCCTCAATTGGGGGATGGGTGTACGAAGGGGAGAGAAAGAAGGCGAGGCCGGCGCAATCAACATCAACGATGGAAGTTACACAGGAAAAATGGAAAAATCGAGGAGCAAAAATGGAAGGACAAGATTTTGGCGAATATAGCAAATGAGCAAGAATGTCGTCAGGTGAAGAAGAGGCAAAACGGACGACTCCGACGATGGAAGTTTCATAAGGAAAAGGAAGAAAAAGCCGAGAGGGAAGGGACGAAAGAAAACACGCCGGCGGTCACATGGTCGGAAAAGCGAGACAGGGGACAGACGAAGAAGAGATGGAGGAATAACTGGCCGACGATCACATGGCTGGAAAAACAAGTGGCAAGTGGAGGAAGAACTCGTCGCAGGCAGTTTGGCGTCAACAGCAAGGTGGGCGGCGGTGGAAGGCTAAAGGACGGAGGAGGAAAAGAAGGCAGGGGAAACGGTTAG

Protein sequence

MQMEKEQIQKKEEEEAVKKRECNSIGEKTVIRKQSRRVAGRRRADAKVRPETREEAVQESPKVFSGKGSLNKYEKIDPQLGDGCTKGRERRRGRRNQHQRWKLHRKNGKIEEQKWKDKILANIANEQECRQVKKRQNGRLRRWKFHKEKEEKAEREGTKENTPAVTWSEKRDRGQTKKRWRNNWPTITWLEKQVASGGRTRRRQFGVNSKVGGGGRLKDGGGKEGRGNG

Homology

The following BLAST results are available for this feature:

BLAST of Lag0029961 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0029961 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0029961 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0029961 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029961.1	Lag0029961.1	mRNA