Lag0029957 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029957
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDUF761 domain-containing protein
Locationchr8: 43391212 .. 43391760 (+)
RNA-Seq ExpressionLag0029957
SyntenyLag0029957
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGGCTGCTCCATCTTCACCAAAGATCCTTCCTTCTCTCCAAATTTTCTCACTCAAGTCCTCACATTCTTCTACCTTAGTTTTTGTAAAGTTCAAAACTTTCATTCACACTATCATCTTCTCCCAATTGTGCCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTCCAACATCTCAAGAAAAACTATCACTACAAAAACAAGAACAAGAACAAGATCTTCTTTGGATCGTTCAGGCTTCATTACAATTGGTGCTCTTCCCACGTGATGCCCGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCACCACCACAGCCGTCACGGACAGCTCTCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACAGTGACGACGACGACCGAGATGAATGAGATCGACAAGTTGGCCGAGATGTTCATAGCTAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA

mRNA sequence

ATGAAAATGGCTGCTCCATCTTCACCAAAGATCCTTCCTTCTCTCCAAATTTTCTCACTCAAGTCCTCACATTCTTCTACCTTAGTTTTTGTAAAGTTCAAAACTTTCATTCACACTATCATCTTCTCCCAATTGTGCCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTCCAACATCTCAAGAAAAACTATCACTACAAAAACAAGAACAAGAACAAGATCTTCTTTGGATCGTTCAGGCTTCATTACAATTGGTGCTCTTCCCACGTGATGCCCGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCACCACCACAGCCGTCACGGACAGCTCTCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACAGTGACGACGACGACCGAGATGAATGAGATCGACAAGTTGGCCGAGATGTTCATAGCTAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA

Coding sequence (CDS)

ATGAAAATGGCTGCTCCATCTTCACCAAAGATCCTTCCTTCTCTCCAAATTTTCTCACTCAAGTCCTCACATTCTTCTACCTTAGTTTTTGTAAAGTTCAAAACTTTCATTCACACTATCATCTTCTCCCAATTGTGCCGGTTGGCTCGGGCGATCTCCCGAGCCAAGTCGACCGTGGTCCAACATCTCAAGAAAAACTATCACTACAAAAACAAGAACAAGAACAAGATCTTCTTTGGATCGTTCAGGCTTCATTACAATTGGTGCTCTTCCCACGTGATGCCCGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCACCACCACAGCCGTCACGGACAGCTCTCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACAGTGACGACGACGACCGAGATGAATGAGATCGACAAGTTGGCCGAGATGTTCATAGCTAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA

Protein sequence

MKMAAPSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTVVQHLKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDATTTAVTDSSQLSGYLQWLEERKLESETTTVTTTTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
Homology
BLAST of Lag0029957 vs. NCBI nr
Match: XP_038890518.1 (uncharacterized protein LOC120080048 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 161/185 (87.03%), Postives = 169/185 (91.35%), Query Frame = 0

Query: 1   MKMA-APSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTV 60
           MKMA +PSSPKILPS+QIFS+KSSHSSTL+FVKFK+FIHTIIFSQ+CRL RAISRAKSTV
Sbjct: 1   MKMAISPSSPKILPSVQIFSIKSSHSSTLIFVKFKSFIHTIIFSQVCRLVRAISRAKSTV 60

Query: 61  VQHLKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYDATTTAVTDSS 120
           V  LKK+YHYKNKNKNKIFFGSFRLHYNWCSSHVMP+PDPVWE GHFYYD   T   D S
Sbjct: 61  VHILKKSYHYKNKNKNKIFFGSFRLHYNWCSSHVMPMPDPVWELGHFYYDHAATTTADGS 120

Query: 121 QLSGYLQWLEERKLESET-TTVTTTTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEM 180
           QLSGYLQWLEERKLESET TT  T TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEM
Sbjct: 121 QLSGYLQWLEERKLESETMTTTATMTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEM 180

Query: 181 MARSM 183
           MARSM
Sbjct: 181 MARSM 185

BLAST of Lag0029957 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 0

Query: 3   MAAPSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTVVQH 62
           MAAPSSP ILPSLQ+FSLKSS+SSTL  VKFK+F+HTIIFS LCRLARAISRAKSTVV+ 
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 63  LKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDATTTAVTDSSQLSG 122
           LKKNYHY N+NKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDA T    DSSQLSG
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAAT---ADSSQLSG 120

Query: 123 YLQWLEERKLESET---TTVTTTTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMA 182
           YLQWLEERKLESET    T T  TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMA
Sbjct: 121 YLQWLEERKLESETAAGVTTTMATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMA 180

BLAST of Lag0029957 vs. NCBI nr
Match: KAG7033099.1 (hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-78
Identity = 159/182 (87.36%), Postives = 165/182 (90.66%), Query Frame = 0

Query: 3   MAAPSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTVVQH 62
           MAAPSSP ILPSLQ+FSLKSS+SSTL  VKFK+F+HTIIFS LCRLARAISRAKSTVV+ 
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 63  LKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDATTTAVTDSSQLSG 122
           LKKNYHY N+NKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYD   TA  DSSQLSG
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYD---TATADSSQLSG 120

Query: 123 YLQWLEERKLESETTTVTTT--TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR 182
           YLQWLEERKLESET    TT  TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR
Sbjct: 121 YLQWLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR 179

BLAST of Lag0029957 vs. NCBI nr
Match: XP_022961611.1 (uncharacterized protein LOC111462262 [Cucurbita moschata] >KAG6602421.1 hypothetical protein SDJN03_07654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-78
Identity = 159/182 (87.36%), Postives = 165/182 (90.66%), Query Frame = 0

Query: 3   MAAPSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTVVQH 62
           MAAPSSP ILPSLQ+FSLKSS+SSTL  VKFK+F+HTIIFS LCRLARAISRAKSTVV+ 
Sbjct: 1   MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRV 60

Query: 63  LKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDATTTAVTDSSQLSG 122
           LKKNYHY N+NKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDA T    DSSQLSG
Sbjct: 61  LKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAAT---ADSSQLSG 120

Query: 123 YLQWLEERKLESETTTVTTT--TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR 182
           YLQWLEERKLESET    TT  TEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR
Sbjct: 121 YLQWLEERKLESETAAGVTTIATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMAR 179

BLAST of Lag0029957 vs. NCBI nr
Match: XP_011655408.1 (uncharacterized protein LOC105435523 [Cucumis sativus] >KGN51368.1 hypothetical protein Csa_008863 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77
Identity = 161/186 (86.56%), Postives = 167/186 (89.78%), Query Frame = 0

Query: 1   MKMA-APSSPKILPSLQIFSLKSSHSSTLVFVKFKTFIHTIIFSQLCRLARAISRAKSTV 60
           MKMA  PSSP ILPS QIFS+KSSHSSTL+FVKFKTFIHTIIFSQ CRLARAISRAKSTV
Sbjct: 2   MKMAIGPSSPNILPSPQIFSIKSSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTV 61

Query: 61  VQHLKKNYHYKNKNKNKIFFGSFRLHYNWCSSHVMPVPDPVWE-GHFYYDATTTAVTDSS 120
           V  LKK+YHYK+KNKNKIFFGSFRLHYNWCSSHVMPVPDP+WE GHFYYD  T+   D S
Sbjct: 62  VHILKKSYHYKDKNKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGS 121

Query: 121 QLSGYLQWLEERKLESET-TTVT-TTTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQE 180
           QLSGYLQWLEERKLESET TT T TT EMNEIDKLAEMFIASCHEKFRLEKQESARRFQ 
Sbjct: 122 QLSGYLQWLEERKLESETMTTATGTTAEMNEIDKLAEMFIASCHEKFRLEKQESARRFQA 181

Query: 181 MMARSM 183
           MMARSM
Sbjct: 182 MMARSM 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890518.11.1e-7987.03uncharacterized protein LOC120080048 [Benincasa hispida][more]
XP_023548199.12.7e-7886.89uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
KAG7033099.13.5e-7887.36hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022961611.13.5e-7887.36uncharacterized protein LOC111462262 [Cucurbita moschata] >KAG6602421.1 hypothet... [more]
XP_011655408.11.0e-7786.56uncharacterized protein LOC105435523 [Cucumis sativus] >KGN51368.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 146..180
e-value: 7.2E-14
score: 51.1
NoneNo IPR availablePANTHERPTHR33450EMB|CAB67623.1-RELATEDcoord: 6..182
NoneNo IPR availablePANTHERPTHR33450:SF4DUF761 DOMAIN PROTEINcoord: 6..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029957.1Lag0029957.1mRNA