Lag0029915 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029915
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ribosomal RNA large subunit methyltransferase E
Location	chr8: 43073910 .. 43075377 (+)
RNA-Seq Expression	Lag0029915
Synteny	Lag0029915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAGCAGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGGTAAAAACAATCCCCTCACTGTTTTTCCTCCTTCTTATGACCTTCGAGCCTCGCCATCCTAATTAGATATCTTCATTCTCTTGTACTGAGAACAGTTGCTTCAGATTCAAAAGCGATTCAATTTGATTAATTCAGGCTCGTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTCTGAATATGAATCTTTCACCTTCATTCGACAAACTCTTTTGTGTCCTTTTGACTTCCAAAATATTTCTTTTCTGGTGGAATGTGTGAACCAGGGCATTTGATTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAAGAATGGAGGCTCTGTTTTGGGTATTGATCTCAAGGTGAAATATTTAACTTCTTGTGGGTTACTCAGTTATGCTTTCTGCTGAATCTCATTTTTCAGAAAGTTATAATATGTAAAAGAAAATGTGGGTCTTGCAGAACAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGTAACTTAACTTAGCAAAAGTAGGAAATGTCTTCTAGCATTTTAAGTTTACCAATGTCATTAACATTGAATGTTGTATCATTCATGAACATTGCTCAGTTGGTACATTGGCAACATTCCTGAACAACAATGCTTTCTTCTCTTTGAATGACGTTAAACATATCGATAACATTCAATGGTAGTGCAAGATTTGTGCAATGGTTTGGTTTAGGGGATCTGATATTTGCTCTGTATCTTAAAAAAATTGAAGTTTGTCAAACAAAATACATAATACACGAGGAGTACGAAGAGAAGGTGCAGTGACTGGGCAAGAAAGACTTGCGAGTTACTGAAATAAGTTTAACTGTCTAAATGCTATTTTAATGCTGTAGGAGAAGGGATTTTCAGTAATACTCTCCGACATGTGCCCCTCAGTGTCTGGAATCACCACTAGAGACACGACTTTATCAGTTGAATTAGGGATGCAAGCAGTTAACTTGGCTATTGGAGAAGCCGCGTTAGGTCTTGGCGATGATGTTATGCATGGAAAGGACAAGGGCAATGTGGATGATTCAACTTCAGTTACAGATTATGATGGTGTGCTGCAAAAAGGAGGCCACCTCGTGATAAAACTTTTAGAGAGTGAAGATACGCAAGGTAGAATTTTATTTCCACTTAAAGGGAGGATATGGTTGGTTTATCTTTACATTCTTCCTTTATTCTTTATCTCAGAATTCAGCCGGATGTTGAAACCGCTATTCAGAAAGGCATCCTGGTTGAGGCCCAAGGCTACTCGATCCTCATCGAGAGAGATTTATTTGATATGTCAAAGCTTGCAGGCAAGAACATAA

mRNA sequence

ATGAGTGGAGCAGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAAAAGCGATTCAATTTGATTAATTCAGGCTCGTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAAGAATGGAGGCTCTGTTTTGGGTATTGATCTCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGAGAAGGGATTTTCAGTAATACTCTCCGACATGTGCCCCTCAGTGTCTGGAATCACCACTAGAGACACGACTTTATCAGTTGAATTAGGGATGCAAGCAGTTAACTTGGCTATTGGAGAAGCCGCGTTAGGTCTTGGCGATGATGTTATGCATGGAAAGGACAAGGGCAATGTGGATGATTCAACTTCAGTTACAGATTATGATGGTGTGCTGCAAAAAGGAGGCCACCTCGTGATAAAACTTTTAGAGAGTGAAGATACGCAAGAATTCAGCCGGATGTTGAAACCGCTATTCAGAAAGGCATCCTGGTTGAGGCCCAAGGCTACTCGATCCTCATCGAGAGAGATTTATTTGATATGTCAAAGCTTGCAGGCAAGAACATAA

Coding sequence (CDS)

ATGAGTGGAGCAGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAAAAGCGATTCAATTTGATTAATTCAGGCTCGTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAAGAATGGAGGCTCTGTTTTGGGTATTGATCTCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCAAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGGCACTATCTCCTAAGGAGAAGGGATTTTCAGTAATACTCTCCGACATGTGCCCCTCAGTGTCTGGAATCACCACTAGAGACACGACTTTATCAGTTGAATTAGGGATGCAAGCAGTTAACTTGGCTATTGGAGAAGCCGCGTTAGGTCTTGGCGATGATGTTATGCATGGAAAGGACAAGGGCAATGTGGATGATTCAACTTCAGTTACAGATTATGATGGTGTGCTGCAAAAAGGAGGCCACCTCGTGATAAAACTTTTAGAGAGTGAAGATACGCAAGAATTCAGCCGGATGTTGAAACCGCTATTCAGAAAGGCATCCTGGTTGAGGCCCAAGGCTACTCGATCCTCATCGAGAGAGATTTATTTGATATGTCAAAGCTTGCAGGCAAGAACATAA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSDMCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART

Homology

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BLAST of Lag0029915 vs. NCBI nr
Match: XP_023543349.1 (uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 223/238 (93.70%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDK-GNVDDSTSVTDYDG 180
           MCPSVSGITTRD +LSVELGMQAVNLA+GEAAL  GDDVMHGK+K  NVDDS SV+DYDG
Sbjct: 121 MCPSVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Lag0029915 vs. NCBI nr
Match: KAG6602386.1 (hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 221/238 (92.86%), Postives = 229/238 (96.22%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDK-GNVDDSTSVTDYDG 180
           MCP VSGITTRD +LSVELGMQAVNLA+GEAAL  GDDVMHGK+K  NVDDS SV+DYDG
Sbjct: 121 MCPMVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           +LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 LLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Lag0029915 vs. NCBI nr
Match: XP_022960605.1 (uncharacterized protein LOC111461336 [Cucurbita moschata])

HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-118
Identity = 221/238 (92.86%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDK-GNVDDSTSVTDYDG 180
           MCP VSGITTRD +LSVELGMQAVNLA+GEAAL  GDDVMHGK+K  NVDDS  V+DYDG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Lag0029915 vs. NCBI nr
Match: XP_022134055.1 (uncharacterized protein LOC111006421 isoform X1 [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.5e-118
Identity = 220/236 (93.22%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTV ADVMNLP+NKLKALSPKE+GFSVILSD
Sbjct: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVSADVMNLPRNKLKALSPKERGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGV 180
           MCPSVSGITTRD TLSVELGMQAVNLAIGEAALG GDDVMHGKD  +VDDSTSV DYDG+
Sbjct: 121 MCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHGKD--SVDDSTSVVDYDGL 180

Query: 181 LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 237
           LQ+GGHLV+KLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR
Sbjct: 181 LQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 234

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BLAST of Lag0029915 vs. NCBI nr
Match: XP_022990132.1 (uncharacterized protein LOC111487116 [Cucurbita maxima])

HSP 1 Score: 427.6 bits (1098), Expect = 7.2e-116
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHV+CDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAA-LGLGDDVMHGKDK-GNVDDSTSVTDYD 180
           MCP VSGITTRD +LSVELGMQAVN+A+GEAA L  GDDVMHGK+K  NVDDS  V+DYD
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

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BLAST of Lag0029915 vs. ExPASy Swiss-Prot
Match: A8ZT18 (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=rlmE PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 73/227 (32.16%), Postives = 111/227 (48.90%), Query Frame = 0


Query: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLG 62
           G   PD + R+A+   Y ARS +KL +IQK+ N++  G++VLDLGC PG+W+  A +++G
Sbjct: 8   GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67

Query: 63  PLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSDMC 122
               GG V GIDLKKV     H  ++  ++  D+  + +   +AL+       V+LSDM 
Sbjct: 68  ---RGGKVTGIDLKKVA---THMPAQATSLQEDIYEIDR---EALAGTLGPLDVVLSDMA 127

Query: 123 PSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQ 182
           P   G    D   S  L   A++LA+                               +L+
Sbjct: 128 PDTMGNKFTDAARSFHLAAAALDLAL------------------------------FLLK 187

Query: 183 KGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 230
            GGH V K+ + ED Q F  M+K  F +    +P+  R  S+E Y+I
Sbjct: 188 PGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKETYVI 195

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BLAST of Lag0029915 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +  +AQ+ G+ ARS FKL ++QKR+ ++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSDMCPSVSG 127
           G V+G+DLK +  P        Q +  D   L +  L  +    + F V+LSDM P+ +G
Sbjct: 73  GRVIGLDLKPMDQPD---KPNAQFIQGDAFELTQEFLDEIG---RDFDVVLSDMAPNTTG 132

Query: 128 ITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQKGGHL 187
           I   D   S          A+ E+AL                 + +VT    VL+ GG  
Sbjct: 133 IKNVDALKSA---------ALCESAL-----------------AAAVT----VLKPGGSF 192

Query: 188 VIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 230
           V K+ + E    F + +K  F K    +P++TR  SREIY++
Sbjct: 193 VCKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVV 195

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BLAST of Lag0029915 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-23
Identity = 70/226 (30.97%), Postives = 111/226 (49.12%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +Y ++++ GY ARSA+KL QI +  NL   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSDMCPSVSG 127
           G+V+G+DL+++       D  V+T+  D+           +  E+G  V++SDM P+++G
Sbjct: 65  GTVVGVDLQRIDDLD---DHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTG 124

Query: 128 ITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQKGGHL 187
               D   SV L  QA ++A                              + +L  GG  
Sbjct: 125 EYALDHARSVHLARQAFDVA------------------------------EELLAPGGDF 184

Query: 188 VIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 234
           V+K+ + ED   F   ++  F     + P A+R SS E+YL+ + L
Sbjct: 185 VVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGL 194

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BLAST of Lag0029915 vs. ExPASy Swiss-Prot
Match: Q58771 (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=rlmE PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-22
Identity = 70/225 (31.11%), Postives = 116/225 (51.56%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           DF+Y+ A++L Y +R++FKL+Q+ ++FN+I  G  VLDLGCAPG W+QVA + +G   + 
Sbjct: 15  DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 74

Query: 68  GSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPK-EKGFSVILSDMCPSVS 127
           G V+GIDL+ VK      D+ V       +    NK++ L P  EK   V++SD  P++S
Sbjct: 75  GFVIGIDLQPVK--PFEYDNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNIS 134

Query: 128 GITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQKGGH 187
           G    D   S++L   A+ +A                                +L++ G+
Sbjct: 135 GYWDIDHARSIDLVTTALQIA------------------------------TEMLKERGN 194

Query: 188 LVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQ 232
            V K+   +   ++  ++K  F K    +P+A+R  S E+Y+I +
Sbjct: 195 FVAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204

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BLAST of Lag0029915 vs. ExPASy Swiss-Prot
Match: Q466Q1 (Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina barkeri (strain Fusaro / DSM 804) OX=269797 GN=rlmE PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 71/231 (30.74%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D++YR+A+  GY +R++FKL QI +R ++IN G SV+DLG APG WLQVA +      +G
Sbjct: 7   DYYYRQAKEEGYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQVAKE-----LSG 66

Query: 68  GSVLGIDLKKVKVP---------HVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVIL 127
           G VLG+DL+++ VP         +++ DS +Q +   V               KG  V+L
Sbjct: 67  GKVLGVDLQRI-VPIEGVETIQGNINADSTIQKIIKTV-------------GAKGADVVL 126

Query: 128 SDMCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYD 187
            D  P++SG  + D   S+EL   A+  A                               
Sbjct: 127 CDAAPNLSGNWSYDHARSIELATSALECA------------------------------K 186

Query: 188 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 230
            +L+  G+ V+K+ + +   ++ + ++  F +     PKA+RS S EIY+I
Sbjct: 187 KILKPKGNFVVKVFQGDMFNDYMQKVRDNFVRTMAYSPKASRSQSAEIYVI 188

[Close]

BLAST of Lag0029915 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118
Identity = 221/238 (92.86%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDK-GNVDDSTSVTDYDG 180
           MCP VSGITTRD +LSVELGMQAVNLA+GEAAL  GDDVMHGK+K  NVDDS  V+DYDG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of Lag0029915 vs. ExPASy TrEMBL
Match: A0A6J1BWZ2 (uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006421 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 220/236 (93.22%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTV ADVMNLP+NKLKALSPKE+GFSVILSD
Sbjct: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVSADVMNLPRNKLKALSPKERGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGV 180
           MCPSVSGITTRD TLSVELGMQAVNLAIGEAALG GDDVMHGKD  +VDDSTSV DYDG+
Sbjct: 121 MCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHGKD--SVDDSTSVVDYDGL 180

Query: 181 LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 237
           LQ+GGHLV+KLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR
Sbjct: 181 LQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 234

[Close]

BLAST of Lag0029915 vs. ExPASy TrEMBL
Match: A0A6J1JHT1 (uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSV+GIDLKKVKVPHV+CDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAA-LGLGDDVMHGKDK-GNVDDSTSVTDYD 180
           MCP VSGITTRD +LSVELGMQAVN+A+GEAA L  GDDVMHGK+K  NVDDS  V+DYD
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQART 238
           GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQA+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

[Close]

BLAST of Lag0029915 vs. ExPASy TrEMBL
Match: A0A6J1BWX0 (uncharacterized protein LOC111006421 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006421 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115
Identity = 217/236 (91.95%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFK   IQK+F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFK---IQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTV ADVMNLP+NKLKALSPKE+GFSVILSD
Sbjct: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVSADVMNLPRNKLKALSPKERGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGV 180
           MCPSVSGITTRD TLSVELGMQAVNLAIGEAALG GDDVMHGKD  +VDDSTSV DYDG+
Sbjct: 121 MCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHGKD--SVDDSTSVVDYDGL 180

Query: 181 LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 237
           LQ+GGHLV+KLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR
Sbjct: 181 LQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 231

[Close]

BLAST of Lag0029915 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.2e-113
Identity = 211/239 (88.28%), Postives = 226/239 (94.56%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ +F LI SGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGP +NGGSVLGID+KKVKVPHVHCDSRVQTVCADVMNLPK+KLK+LSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGV 180
           MCP VSGITTRD  LSVELGMQAVNLA+GEAALG+G +V+HGKDK ++DDSTS +D DGV
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVG-EVIHGKDKDSIDDSTSASDCDGV 180

Query: 181 LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LQART 238
           L+KGGHLV+KLLESEDTQEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQS  LQART
Sbjct: 181 LRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of Lag0029915 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.4e-87
Identity = 162/234 (69.23%), Postives = 188/234 (80.34%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQK++ LI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120
           LGPL++GG V+G+D+KKVKVP   CDSRVQT+ ADV+N P+ K++ LSP++ GFSVILSD
Sbjct: 61  LGPLRSGGIVVGMDIKKVKVP-PQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 120

Query: 121 MCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGV 180
           MC SVSGITTRD  LS ELGM+A++LA+G+AA+             N DD        GV
Sbjct: 121 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI---------SQSPNDDDGGPNESRPGV 180

Query: 181 LQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQ 235
           L+ GGHLVIKLLESED Q+F+R+ KP+F KASWLRPKATR SSREIYLICQ  +
Sbjct: 181 LRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224

[Close]

BLAST of Lag0029915 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 67/224 (29.91%), Postives = 110/224 (49.11%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
           D +YR A+  G+ +R+++KLLQ+  +++L++S  +VLDL  APG W+QVA + + P+  G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKV-PV--G 70

Query: 68  GSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKE--KGFSVILSDMCPSV 127
             VLGIDL  + +P   C +  Q +        K+K+K +  +     F+++L D  P+V
Sbjct: 71  SLVLGIDLVPI-LPVRGCVTMTQDITRTEC---KSKIKQVMEQHGVSAFNLVLHDGSPNV 130

Query: 128 SGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYDGVLQKGG 187
            G   ++      L + +V LA                           T++   L + G
Sbjct: 131 GGAWAQEAMSQNALVIDSVRLA---------------------------TEF---LARNG 190

Query: 188 HLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 230
           +LV K+  S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 NLVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of Lag0029915 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 61/234 (26.07%), Postives = 105/234 (44.87%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQVACQSLG-PLKN 67
           D +YR+A+  G+ ARSAFKLLQI + FN+      V+DL  APG+W QV  + L  P K+
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GGS--------VLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVIL 127
                      ++ IDL+    P    +  +Q V  D+ N    ++           +++
Sbjct: 70  SAESKDGDLPLIVAIDLQ----PMAPIEGVIQ-VQGDITNARTAEVVIRHFDGCKADLVV 129

Query: 128 SDMCPSVSGITTRDTTLSVELGMQAVNLAIGEAALGLGDDVMHGKDKGNVDDSTSVTDYD 187
            D  P V+G+   D  +  +L +  + +            V H                 
Sbjct: 130 CDGAPDVTGLHDMDEFVQSQLILAGLTI------------VTH----------------- 189

Query: 188 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS 233
            +L++GG  + K+   +DT      LK  F   ++ +PK++R+SS E + +C++
Sbjct: 190 -ILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCEN 208

[Close]

BLAST of Lag0029915 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQKRFNLINSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI + FN+      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of Lag0029915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543349.1	1.4e-119	93.70	uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo]	[more]
KAG6602386.1	1.2e-118	92.86	hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960605.1	3.5e-118	92.86	uncharacterized protein LOC111461336 [Cucurbita moschata]	[more]
XP_022134055.1	4.5e-118	93.22	uncharacterized protein LOC111006421 isoform X1 [Momordica charantia]	[more]
XP_022990132.1	7.2e-116	91.63	uncharacterized protein LOC111487116 [Cucurbita maxima]	[more]

BLAST of Lag0029915 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8ZT18	8.0e-25	32.16	Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (str...	[more]
B8FL12	1.2e-23	33.78	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
B9LSX2	3.3e-23	30.97	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
Q58771	1.7e-22	31.11	Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii...	[more]
Q466Q1	1.1e-21	30.74	Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina barkeri (strai...	[more]

BLAST of Lag0029915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9J8	1.7e-118	92.86	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1BWZ2	2.2e-118	93.22	uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JHT1	3.5e-116	91.63	uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116...	[more]
A0A6J1BWX0	3.0e-115	91.95	uncharacterized protein LOC111006421 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3C9F1	6.2e-113	88.28	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]

BLAST of Lag0029915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	3.4e-87	69.23	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	1.7e-17	29.91	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	1.3e-14	26.07	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	1.5e-07	52.08	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..231 e-value: 4.3E-45 score: 154.0
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..237 e-value: 2.5E-52 score: 179.4
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..234
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..234
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 170..237 e-value: 2.1E-11 score: 41.6 coord: 3..160 e-value: 1.8E-36 score: 123.6
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..234 score: 28.849762
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 8..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029915.1	Lag0029915.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity