Lag0029913 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029913
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	transcription initiation factor TFIID subunit 7
Location	chr8: 43063332 .. 43065108 (-)
RNA-Seq Expression	Lag0029913
Synteny	Lag0029913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCAGTTTGTACTGAGGGTTCCACCCTCTGTTGCTGAACGAATCGAACGTCTATTAAATGAAAATTCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGGTAAAAGAACTTTTAGACTTTTGGACATATTAGTTGATCGTTCTATTGCCTCGTGCCTGATTGGTTTGTGCTTTTTTTTTTCTTTTGTTCTGGAGGAGATTTGGAAATGTGAATCTCTTTACTCTTTTCCTCAAGGCAGCTGTTATAGATGTTAGTTATTGTGTATGGATTCAATCCGACTTCTTAAATTAGCCAAATATTTGTTTGCTATAAGTACTTTATGGAAAAAAAAATTGGCAGTGATATGATATCTGGAGGTAGAGAGAGATTCGGGAATAGATCAAATTGTACAGTATGGTTTTGTTTTAATTAGAGGCTTGGCTTAATTGCCTATTTATGGCCTCTTCTATTGTTATCCAGAGGATGGGAGAAGTGGCACTTTTGCTATTGGTGATGACCATTTTCCTGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAGTCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGATATTGGCCAGGTAAAATGGTATTACAGTCGTTAGCATATGTATTTCAAAAGACACGATTCTGCCGTTTCTTATGTTTTATGGGATTATATCATTTCAACAGATGATTATGGTCAGAGAACCTGGTGACCCTGCTCCAGATTCGACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAACCGGATTTAAATGTATGGTATTCTTACTCCTCTTACTATTAGTTTGGTGTAGCATTTTCTTAAGAGTAGAAATAAATTGCTGTACAACATGATAATCCATTTAGATTCCTACTCATACAATGAGTAGGTTGTCGAGGATAAATTATTGAATGATTCTAGTACAATGTGTGTGCCTACATAAAGCTTAGATTGACATTAATCTCTTAAATTTATTGGTCAATAGTGACATCTTAAGCTTTTTTCTAGTACACCAACCTTACTCAATAGTTTCTCGACAGTGAAATATCTTTTCAACAAGTAGTCAGTTCAACATTTGCATTGTTCTTCATATCAAAATTTGTTGCATTTAGAAAGTCTCTTGACTCTTCCATACTGATTATCTTTTCTTTCTTCTTTGGCAGCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTGATAATTTATGTTTTTCAGTTTCATTTATGTGTTTGAAACTCATTACCATATTAATTTATGCAACATGCATCCATCCCCACCTCAACCTGCATCATAAACATTGTTTAGTCTAATAACCATGGCAGATTGAGAATTATTTTAATTAGCAGTCACATGAAATTCTTGATTGAAACACGTATGGGAACTGGAAATGACAATTGTTACGTAGAGGCAATTGTTTTGTTTTCTACACAACAGGCCTTGTTGCTTGTCTTCTTCTTACATAAGTTATAATCTTATGCTGCCATTTAACTTAAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATTCTCATCACGCAAGTGCAAAGCCTGCATCCACACCTGCAGAGAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGCGAGCCTGAAAGGAGTGATTCCGATGACTCTGATCATTCAATTGATTAG

mRNA sequence

ATGGAGGAGCAGTTTGTACTGAGGGTTCCACCCTCTGTTGCTGAACGAATCGAACGTCTATTAAATGAAAATTCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCTATTGGTGATGACCATTTTCCTGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAGTCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGATATTGGCCAGATGATTATGGTCAGAGAACCTGGTGACCCTGCTCCAGATTCGACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAACCGGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTGATAATTTATTGGCTGAGCAACAGGATGATAGAGATGAGAATTCTCATCACGCAAGTGCAAAGCCTGCATCCACACCTGCAGAGAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGCGAGCCTGAAAGGAGTGATTCCGATGACTCTGATCATTCAATTGATTAG

Coding sequence (CDS)

ATGGAGGAGCAGTTTGTACTGAGGGTTCCACCCTCTGTTGCTGAACGAATCGAACGTCTATTAAATGAAAATTCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCTATTGGTGATGACCATTTTCCTGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAGTCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGATATTGGCCAGATGATTATGGTCAGAGAACCTGGTGACCCTGCTCCAGATTCGACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAACCGGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTGATAATTTATTGGCTGAGCAACAGGATGATAGAGATGAGAATTCTCATCACGCAAGTGCAAAGCCTGCATCCACACCTGCAGAGAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGCGAGCCTGAAAGGAGTGATTCCGATGACTCTGATCATTCAATTGATTAG

Protein sequence

MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPDVMETETNVGEPERSDSDDSDHSID

Homology

[Close]

BLAST of Lag0029913 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98
Identity = 192/204 (94.12%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AEQQDDRDEN HH +AKPAS PA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEQQDDRDENPHHTNAKPASAPAPKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETETNVGEPERSDSDDSDHSID
Sbjct: 181 VMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. NCBI nr
Match: XP_038891097.1 (transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_038891098.1 transcription initiation factor TFIID subunit 7 [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 190/204 (93.14%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNE++SSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNESASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIK ADIGQMIMVREPGD APDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKTADIGQMIMVREPGDAAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AEQQDDRDEN HHASAKPAS PA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEQQDDRDENPHHASAKPASVPAAKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETETNVGEPERSDSDDSDHS+D
Sbjct: 181 VMETETNVGEPERSDSDDSDHSVD 201

[Close]

BLAST of Lag0029913 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 3.8e-97
Identity = 191/204 (93.63%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDDR ENSHHASAKPASTPA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDRHENSHHASAKPASTPAAKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 181 VMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 8.4e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDD+ ENSHHASAKPASTPA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDKHENSHHASAKPASTPAAKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 181 VMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. NCBI nr
Match: XP_022990127.1 (transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 8.4e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDD+ ENSHHASAKPASTPA KPD
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDKHENSHHASAKPASTPAAKPD 264

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 265 VMETETTVGEPERSDSDDSDHSID 285

[Close]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-61
Identity = 114/145 (78.62%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E++S+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

[Close]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 4.9e-15
Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +EEQF+LR+PP  A  + ++++  +++ +D  L + FS DG      + +   PA L++L
Sbjct: 106 VEEQFILRLPPEQAYAVRKIIHSRNAAWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNL 165

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV+ S KT D     K AD+ QM++    G+P     E                     
Sbjct: 166 PCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKK 225

Query: 121 --YRHGLTPPMRDARKRRFRREPDLNPELVRRVEK 133
             ++HG+TPP+++ RK+RFR+     P+ V++V++
Sbjct: 226 YNWKHGITPPLKNVRKKRFRKTTKKLPD-VKQVDE 258

[Close]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-13
Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREPGDPA-PDSTE---------- 120
           PCV+ES KT D     K ADI QM++          V EP  PA P +++          
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV+ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of Lag0029913 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.5e-99
Identity = 192/204 (94.12%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AEQQDDRDEN HH +AKPAS PA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEQQDDRDENPHHTNAKPASAPAPKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETETNVGEPERSDSDDSDHSID
Sbjct: 181 VMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.1e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDD+ ENSHHASAKPASTPA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDKHENSHHASAKPASTPAAKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 181 VMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. ExPASy TrEMBL
Match: A0A6J1H9I8 (transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111461346 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.1e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDDR ENSHHASAKPASTPA KPD
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDRHENSHHASAKPASTPAAKPD 180

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 181 VMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Lag0029913 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.1e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDD+ ENSHHASAKPASTPA KPD
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDKHENSHHASAKPASTPAAKPD 264

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 265 VMETETTVGEPERSDSDDSDHSID 285

[Close]

BLAST of Lag0029913 vs. ExPASy TrEMBL
Match: A0A6J1JSC8 (transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.1e-97
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNEN+SSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 84  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 143

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 144 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 203

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPASTPAEKPD 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+    +AE QDD+ ENSHHASAKPASTPA KPD
Sbjct: 204 DLNPELVRRVEKDLLNIMAGGTTENADV---GVAEHQDDKHENSHHASAKPASTPAAKPD 263

Query: 181 VMETETNVGEPERSDSDDSDHSID 205
           VMETET VGEPERSDSDDSDHSID
Sbjct: 264 VMETETTVGEPERSDSDDSDHSID 284

[Close]

BLAST of Lag0029913 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 )

HSP 1 Score: 257.3 bits (656), Expect = 1.0e-68
Identity = 139/209 (66.51%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E++S+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILDNLLAEQQDDRDENSHHASAKPAS---TPAE 180
           DLNPELV+RVE+DLLNI++GGT EN         +++   +EN+ +AS K +S   TP E
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVH------EQEEPATNENASNASKKVSSSSPTPVE 180

Query: 181 KPDVMETETN--VG-EPERSDSDDSDHSI 204
           KP+  ET T+   G EPERS+S+DSD S+
Sbjct: 181 KPEAPETGTSNPTGVEPERSESEDSDDSM 203

[Close]

BLAST of Lag0029913 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 )

HSP 1 Score: 237.7 bits (605), Expect = 8.5e-63
Identity = 114/145 (78.62%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENSSSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E++S+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

The following BLAST results are available for this feature:

BLAST of Lag0029913 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458871.1	1.5e-98	94.12	PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_00...	[more]
XP_038891097.1	2.9e-97	93.14	transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_03889109...	[more]
XP_023516679.1	3.8e-97	93.63	transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022990129.1	8.4e-97	93.14	transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >X...	[more]
XP_022990127.1	8.4e-97	93.14	transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima]	[more]

BLAST of Lag0029913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DG24	1.2e-61	78.62	Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9D3R9	4.9e-15	30.32	Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN...	[more]
Q9R1C0	1.2e-13	31.90	Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7...	[more]
Q6R1L1	4.6e-13	33.13	Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G...	[more]
Q15545	1.0e-12	31.29	Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ...	[more]

BLAST of Lag0029913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8V9	7.5e-99	94.12	transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JR83	4.1e-97	93.14	transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1H9I8	4.1e-97	93.14	transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JHS5	4.1e-97	93.14	transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1JSC8	4.1e-97	93.14	transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of Lag0029913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55300.1	1.0e-68	66.51	TBP-associated factor 7	[more]
AT1G55300.2	8.5e-63	78.62	TBP-associated factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006751	TAFII55 protein, conserved region	SMART	SM01370	TAFII55_N_2	coord: 1..145 e-value: 3.4E-61 score: 219.3
IPR006751	TAFII55 protein, conserved region	PFAM	PF04658	TAFII55_N	coord: 1..136 e-value: 2.3E-32 score: 112.0
IPR006751	TAFII55 protein, conserved region	CDD	cd08047	TAF7	coord: 2..148 e-value: 3.06184E-43 score: 140.482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..120
IPR037817	Transcription initiation factor TFIID subunit 7	PANTHER	PTHR12228	TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029913.1	Lag0029913.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0003743	translation initiation factor activity