Lag0029791 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029791
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSAUR-like auxin-responsive protein family
Locationchr8: 42145774 .. 42146139 (+)
RNA-Seq ExpressionLag0029791
SyntenyLag0029791
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAATTTATCTATAAAACAGTATGCAAGGAAGTGTAGAAAAGCAGCAAGTCAAGTTTTGCAATGTGCAATGATGTGGTGCAGTGCTTGCAGTTGGGATGTGATATTATCAAGTTTGGATGAAGCAAAAGCACTTCCTGGGGATGTCCCAAAGGGCCATTTTGTAGTGTATGTGGGTGAAGAATGCAAGAGATATGTTATTGAGATTGCACTGCTAAAGCATCCTTTGTTCAAGACACTGCTTGATTCTGCTGAGGAAATGTTTGGATTTGCCAATGGTTCTTCAAAGCTTTACTTACCTTGTAAGGAGTGTGTTTTTGTTAGAATTCTTCAATGTGTAGGTTCTTGTACAAAAGAGTGA

mRNA sequence

ATGAAAGGAAATTTATCTATAAAACAGTATGCAAGGAAGTGTAGAAAAGCAGCAAGTCAAGTTTTGCAATGTGCAATGATGTGGTGCAGTGCTTGCAGTTGGGATGTGATATTATCAAGTTTGGATGAAGCAAAAGCACTTCCTGGGGATGTCCCAAAGGGCCATTTTGTAGTGTATGTGGGTGAAGAATGCAAGAGATATGTTATTGAGATTGCACTGCTAAAGCATCCTTTGTTCAAGACACTGCTTGATTCTGCTGAGGAAATGTTTGGATTTGCCAATGGTTCTTCAAAGCTTTACTTACCTTGTAAGGAGTGTGTTTTTGTTAGAATTCTTCAATGTGTAGGTTCTTGTACAAAAGAGTGA

Coding sequence (CDS)

ATGAAAGGAAATTTATCTATAAAACAGTATGCAAGGAAGTGTAGAAAAGCAGCAAGTCAAGTTTTGCAATGTGCAATGATGTGGTGCAGTGCTTGCAGTTGGGATGTGATATTATCAAGTTTGGATGAAGCAAAAGCACTTCCTGGGGATGTCCCAAAGGGCCATTTTGTAGTGTATGTGGGTGAAGAATGCAAGAGATATGTTATTGAGATTGCACTGCTAAAGCATCCTTTGTTCAAGACACTGCTTGATTCTGCTGAGGAAATGTTTGGATTTGCCAATGGTTCTTCAAAGCTTTACTTACCTTGTAAGGAGTGTGTTTTTGTTAGAATTCTTCAATGTGTAGGTTCTTGTACAAAAGAGTGA

Protein sequence

MKGNLSIKQYARKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGSCTKE
Homology
BLAST of Lag0029791 vs. NCBI nr
Match: XP_022134179.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 89/120 (74.17%), Postives = 101/120 (84.17%), Query Frame = 0

Query: 1   MKGNLSIKQYARKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYV 60
           MKG  S+K+Y +KCR AA Q LQ A +WCS CSWD ++SS  EAKA+P DVPKGHFVVYV
Sbjct: 4   MKGK-SVKRYIKKCRNAAIQALQYAAIWCSYCSWD-LMSSCVEAKAIPEDVPKGHFVVYV 63

Query: 61  GEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGSCTK 120
           GEEC+RYVIEIA+LK+P+FK LLDSAEEMFGFANG  KLYLPCKE  FVRILQC+GS TK
Sbjct: 64  GEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRILQCIGSYTK 120

BLAST of Lag0029791 vs. NCBI nr
Match: XP_022959679.1 (auxin-induced protein 15A-like [Cucurbita moschata] >KAG6602309.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178.7 bits (452), Expect = 3.0e-41
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 0

Query: 1   MKGNLSIKQYARKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYV 60
           MKG  + K+ ARKC+KAA+QV Q A++WCS C W+V +SS DE+ A+P DVPKGHFVVYV
Sbjct: 1   MKGK-TTKKLARKCKKAATQVWQYAVLWCSGCRWEV-MSSFDESIAIPEDVPKGHFVVYV 60

Query: 61  GEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGS 118
           GEEC+RYV+EIALLKHPLFKTLLDSAEE+FGF N +SKLYLPCKECVFV ILQC+GS
Sbjct: 61  GEECRRYVVEIALLKHPLFKTLLDSAEEVFGFDN-ASKLYLPCKECVFVGILQCIGS 114

BLAST of Lag0029791 vs. NCBI nr
Match: KGN48091.2 (hypothetical protein Csa_004000 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29
Identity = 70/108 (64.81%), Postives = 81/108 (75.00%), Query Frame = 0

Query: 12  RKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYVGEECKRYVIEI 71
           +K +   SQV++    W   C W V+    + AKA+P DVPKGHFVVYVGE+ KRYVIEI
Sbjct: 15  KKGKNLGSQVVKYGKKWWRLC-WGVV---KEGAKAIPKDVPKGHFVVYVGEDWKRYVIEI 74

Query: 72  ALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGSCT 120
            +L+HPLFK LLDSAEE FGF NG+SKLYLPCKECVFV ILQCV S T
Sbjct: 75  GVLRHPLFKILLDSAEETFGFDNGNSKLYLPCKECVFVTILQCVHSST 118

BLAST of Lag0029791 vs. NCBI nr
Match: XP_004149915.1 (auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29
Identity = 70/108 (64.81%), Postives = 81/108 (75.00%), Query Frame = 0

Query: 12  RKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYVGEECKRYVIEI 71
           +K +   SQV++    W   C W V+    + AKA+P DVPKGHFVVYVGE+ KRYVIEI
Sbjct: 15  KKGKNLGSQVVKYGKKWWRLC-WGVV---KEGAKAIPKDVPKGHFVVYVGEDWKRYVIEI 74

Query: 72  ALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGSCT 120
            +L+HPLFK LLDSAEE FGF NG+SKLYLPCKECVFV ILQCV S T
Sbjct: 75  GVLRHPLFKILLDSAEETFGFDNGNSKLYLPCKECVFVTILQCVHSST 118

BLAST of Lag0029791 vs. NCBI nr
Match: KAA0036482.1 (auxin-induced protein X15-like [Cucumis melo var. makuwa] >TYK00007.1 auxin-induced protein X15-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 7.6e-29
Identity = 70/106 (66.04%), Postives = 80/106 (75.47%), Query Frame = 0

Query: 12  RKCRKAASQVLQCAMMWCSACSWDVILSSLDEAKALPGDVPKGHFVVYVGEECKRYVIEI 71
           +K +   SQV++    W   C W V+    + AKA P DVPKGHFVVYVGE+ KRYVIEI
Sbjct: 54  KKGKNLGSQVVKYGKKWWWLC-WGVV---KEGAKANPKDVPKGHFVVYVGEDWKRYVIEI 113

Query: 72  ALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFVRILQCVGS 118
            +L+HPLFK LLDSAEEMFGF NG+SKLYLPCKECVFV ILQCV S
Sbjct: 114 GVLRHPLFKILLDSAEEMFGFDNGNSKLYLPCKECVFVTILQCVHS 155

BLAST of Lag0029791 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 42  DEAKALPGDVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYL 101
           ++   LP DVPKGHFVVYVGE   RY++ I+ L HP F+ LL  +EE FGF N    + +
Sbjct: 30  NDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGF-NHDMGIII 89

Query: 102 PCKECVFVRILQCV 116
           PC+E  F+     +
Sbjct: 90  PCQEVDFLSFFSMI 102

BLAST of Lag0029791 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.1e-13
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 0

Query: 38  LSSLDEAKALPGDVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSS 97
           LS+ +EA +   D PKG+  VYVGE  KR+VI ++ L  PLF+ LL  AEE FG+ +   
Sbjct: 12  LSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMG 71

Query: 98  KLYLPCKECVFVRILQCVGS 118
            L +PC E +F  I  C+ +
Sbjct: 72  GLTIPCSEDLFQHITSCLSA 91

BLAST of Lag0029791 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-12
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 47  LPGDVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKEC 106
           LP DVPKGHF VYVGE   RY++ I+ L HP F++LL  AEE FGF +    L +PC E 
Sbjct: 39  LPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMG-LTIPCDEL 98

Query: 107 VF 109
           VF
Sbjct: 99  VF 99

BLAST of Lag0029791 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 50  DVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFV 109
           D PKG+  VYVGE+ KR+VI ++ L  P F+ LL  AEE FG+ +    L +PC E VF 
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVF- 75

Query: 110 RILQCVGSC 119
              QC+ SC
Sbjct: 76  ---QCITSC 80

BLAST of Lag0029791 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.7e-11
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 50  DVPKGHFVVYVGEECKRYVIEIALLKHPLFKTLLDSAEEMFGFANGSSKLYLPCKECVFV 109
           D PKG+  VYVGE+ KR+VI ++ +  P F+ LL  AEE FG+ +    L +PC E VF 
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 110 RILQCV 116
           RI  C+
Sbjct: 76  RITCCL 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022134179.12.3e-4174.17indole-3-acetic acid-induced protein ARG7-like [Momordica charantia][more]
XP_022959679.13.0e-4174.36auxin-induced protein 15A-like [Cucurbita moschata] >KAG6602309.1 Auxin-responsi... [more]
KGN48091.22.6e-2964.81hypothetical protein Csa_004000 [Cucumis sativus][more]
XP_004149915.12.6e-2964.81auxin-induced protein 15A [Cucumis sativus][more]
KAA0036482.17.6e-2966.04auxin-induced protein X15-like [Cucumis melo var. makuwa] >TYK00007.1 auxin-indu... [more]
Match NameE-valueIdentityDescription
P0DKL13.6e-1345.95Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1[more]
P322956.1e-1343.75Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
O656953.9e-1256.45Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
P330812.0e-1147.83Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1[more]
P330825.7e-1146.97Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 43..114
e-value: 1.4E-23
score: 82.8
NoneNo IPR availablePANTHERPTHR31374:SF45SMALL AUXIN-UP RNA-RELATEDcoord: 7..117
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 7..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029791.1Lag0029791.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin