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Lag0029733 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAACCCTTCCAATTCCGACAACATCCCTTCCTCCGCCGCCTCCGATCACGACGCCTCCTCCCGCGGCGGCTGCCGGACCCCCACCTCCGCCGAGCATAAGATTCCCAAGATCCTCAGCTGCCCTGGAGCCCCGAGGAAGCCCAAGCGCCCGCCCGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTGCCTCCACGGCGCCGCCCAAGCGGAGCTGCTGCCGGTCGGCCTGA ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAACCCTTCCAATTCCGACAACATCCCTTCCTCCGCCGCCTCCGATCACGACGCCTCCTCCCGCGGCGGCTGCCGGACCCCCACCTCCGCCGAGCATAAGATTCCCAAGATCCTCAGCTGCCCTGGAGCCCCGAGGAAGCCCAAGCGCCCGCCCGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTGCCTCCACGGCGCCGCCCAAGCGGAGCTGCTGCCGGTCGGCCTGA ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAACCCTTCCAATTCCGACAACATCCCTTCCTCCGCCGCCTCCGATCACGACGCCTCCTCCCGCGGCGGCTGCCGGACCCCCACCTCCGCCGAGCATAAGATTCCCAAGATCCTCAGCTGCCCTGGAGCCCCGAGGAAGCCCAAGCGCCCGCCCGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTGCCTCCACGGCGCCGCCCAAGCGGAGCTGCTGCCGGTCGGCCTGA MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEAASTAPPKRSCCRSA Homology
BLAST of Lag0029733 vs. NCBI nr
Match: XP_023521119.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lag0029733 vs. NCBI nr
Match: XP_038884240.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]) HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52 Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Lag0029733 vs. NCBI nr
Match: XP_022990487.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]) HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51 Identity = 109/125 (87.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Lag0029733 vs. NCBI nr
Match: XP_022923009.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG6602281.1 hypothetical protein SDJN03_07514, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032961.1 hypothetical protein SDJN02_07012, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51 Identity = 109/125 (87.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Lag0029733 vs. NCBI nr
Match: XP_008456553.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >KAA0057132.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa] >TYJ97113.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa]) HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49 Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Lag0029733 vs. ExPASy Swiss-Prot
Match: Q9LZ78 (Cyclin-dependent protein kinase inhibitor SIM OS=Arabidopsis thaliana OX=3702 GN=SIM PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09 Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of Lag0029733 vs. ExPASy Swiss-Prot
Match: Q9LPP4 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.7e-08 Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Lag0029733 vs. ExPASy Swiss-Prot
Match: Q9AV28 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Oryza sativa subsp. japonica OX=39947 GN=SMR1 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.0e-04 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of Lag0029733 vs. ExPASy Swiss-Prot
Match: Q9LZ60 (Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.0e-04 Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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