Lag0029701 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029701
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	TRAF-like family protein, putative
Location	chr8: 41281790 .. 41284074 (-)
RNA-Seq Expression	Lag0029701
Synteny	Lag0029701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCTGATGGTCTGCATGTTGCATTTACTAAAATGTCCCTCCAGATTTTCTATTAGTGATAGAAAACTTTCTATCACTGATAGAATCTACTGTTAGAAAATCTTTCTATCACTAATAGAATCTATCCGTGATAGAAAAGATTTCTATGTATTTTTCTATCCACGATAGAAAAATTTTCTACCACTGATAGAAGATTTCTATCAATGATAGAAAGATTTTCTATCACTTCTATTAGTGATAGAAATCTTCTATCAATGATAGAAAAGTTTCTAACACTGATAGAATGTTCTATCAATGATAGAAAGTGCTTTCTATAAGTGATAGAAAAATCCAACATACAATAACGATACAACTAGCTTCTATCAGTGATAGAAAAGTCATGATAGAACACAACAACTACAAAAACATATAGAATGACAACAATAACCAAACAACTAACAAAACAATATGATATCATAACACCAACACTTAAACTTTCTATCACTGATAGAACGTTTTCTATCATTGATAGATTCTATCAGTAATAGAAAGAAATTCTATCAGCGATAGAAAGATGAGCATTATAAACCAAATAAAGAAATTTACTTAAACAAGGTTTTCAATCGTGTTGTTTAAGTTTTCTGGTAGAAAAGTTTCAATAGTGATAGAATATTTCTATCATTGATAGAAAGTTTTTTTTTATCACTGATAGAATCTATCAGTGATAGAAAGATTTCTATTAGTGATAGAAATTTTTTCTATCATCGATAGAAAGTTTTTCTACCACTGATAGAATCTATCAGTGATAGAAATTTTTTCTATCAATGATAGACTTTACCAATATGTTAAAAAAAAATGAATAAGATGCACGCCAGGGGTAATTTGGAAATATAAAAAATTCATTTAAAAATTTTGCCATATTTGCAATTATTTTTAAAAATTGCTAAATTTGCCATTATTTACCTTAATTTTGCCACCCATTACAATTATCCTAAAAAGTTAAAGAGGTATTTTGTATACTTTACCCTAAAATTAAAAAAGAAGAAAGAAGAAAAAGAGAAGAATTGACGAAAAAGAAAATAAAGAATACGAATAGACAGAAAAAACAAAAAAACAAAAAACAAAAAGAATACGAACAGACAAAGTACTGGACGCAGTATATATATAAGACATGCATTCGTCTTCTTCTTCCTTGTACTGAGGCTGTGAATTAAATACCCACAGATTCTGCTTGCAGTATAAACATTTCTATCTATTTTTCTCTCTCTCAAGTTCATAACTCATATAATGATAATGATCAATTCACAGGGTTTTATGCCATTTTTGCAGTTGTAAGGTGCACAAGAGATGAAAAACCAGTCCATTATACTTTACAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCAAGTTCCAAGCGTGACATATATGAATCCCAGATCTTCAACATCGGAGGTTATAAATGGTGAGTTGCATATTATCAAATTATTATAACTCCCTTCATCTTCATATTGGTAATTTCTCACTATCTTTTGATTTTGGAGGATGTTTTGTTTGTTTGATCGAAGGAAATTAGCACTTTATCCCAATGGAGATAAGAAAAGAAATGGGTCTAATCATGTCTCTTTCTATTTGGTAACGGCTGAGGATGACATTTTATCAACTACTTTAGAAATCAATGCCGTGTTCACATTTCTTGTTTATGATAGTCTTAGAGACAAATATTTGGCAGTCCAAGGTGACCAAAACTCAAACATTTCTTGTTAGTTTTCTTTGAGGTTTTGTTGTTTGATTCTACATATGTTACTTTGTCGTCCTAACGATTGATCAGATGGGAAGATGAGACGTTTTCATGCAATGAAGACAGAGTGGGGGTTTGAAAAGTTGGTTTCACTCGACACTTTCAACGATGCTTCAAATGGGTTTTTGGTTCGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTTTTATGAAATGTGATGGGAAGAGGGAGATCCTGTCGTTGATCAAGGAACCAAAAGATAACAAATTTACCTGGAAACTCAACGGTTTCTCACAGCTAGATAAGAATTATTATGAATCCAAACCTTTTAAAGTGGAGGGCTACTCTTGGTATGAACAAAATTCTATTGTACAGTTAATTATTTTGGAAATGCTTTATTTGCATAAAAGTTAATATGTAGATTTTTCATATTTCAGGAAGATATGGTTGTATCCTAAAGGAGACTCTGATACAAGCTCTGGATATTCGTCATTGTTCATGGGTTTAGATAATTTGGAACAGCTTCCCTAA

mRNA sequence

ATGGCAAAATCTGATGGGTTTTATGCCATTTTTGCAGTTGTAAGGTGCACAAGAGATGAAAAACCAGTCCATTATACTTTACAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCAAGTTCCAAGCGTGACATATATGAATCCCAGATCTTCAACATCGGAGGTTATAAATGGAAATTAGCACTTTATCCCAATGGAGATAAGAAAAGAAATGGGTCTAATCATGTCTCTTTCTATTTGGTAACGGCTGAGGATGACATTTTATCAACTACTTTAGAAATCAATGCCGTGTTCACATTTCTTGTTTATGATAGTCTTAGAGACAAATATTTGGCAGTCCAAGATGGGAAGATGAGACGTTTTCATGCAATGAAGACAGAGTGGGGGTTTGAAAAGTTGGTTTCACTCGACACTTTCAACGATGCTTCAAATGGGTTTTTGCTAGATAAGAATTATTATGAATCCAAACCTTTTAAAGTGGAGGGCTACTCTTGGAAGATATGGTTGTATCCTAAAGGAGACTCTGATACAAGCTCTGGATATTCGTCATTGTTCATGGGTTTAGATAATTTGGAACAGCTTCCCTAA

Coding sequence (CDS)

ATGGCAAAATCTGATGGGTTTTATGCCATTTTTGCAGTTGTAAGGTGCACAAGAGATGAAAAACCAGTCCATTATACTTTACAAATCCAATCCTTTTCGTTGCTGAAGGCCGCACTTGCAAGTTCCAAGCGTGACATATATGAATCCCAGATCTTCAACATCGGAGGTTATAAATGGAAATTAGCACTTTATCCCAATGGAGATAAGAAAAGAAATGGGTCTAATCATGTCTCTTTCTATTTGGTAACGGCTGAGGATGACATTTTATCAACTACTTTAGAAATCAATGCCGTGTTCACATTTCTTGTTTATGATAGTCTTAGAGACAAATATTTGGCAGTCCAAGATGGGAAGATGAGACGTTTTCATGCAATGAAGACAGAGTGGGGGTTTGAAAAGTTGGTTTCACTCGACACTTTCAACGATGCTTCAAATGGGTTTTTGCTAGATAAGAATTATTATGAATCCAAACCTTTTAAAGTGGAGGGCTACTCTTGGAAGATATGGTTGTATCCTAAAGGAGACTCTGATACAAGCTCTGGATATTCGTCATTGTTCATGGGTTTAGATAATTTGGAACAGCTTCCCTAA

Protein sequence

MAKSDGFYAIFAVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFEKLVSLDTFNDASNGFLLDKNYYESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP

Homology

[Close]

BLAST of Lag0029701 vs. NCBI nr
Match: XP_022146379.1 (ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia])

HSP 1 Score: 253.1 bits (645), Expect = 2.0e-63
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 13  VVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRN 72
           V+R TRDEKP+HYTLQIQSFSLLK AL  S  D YES+IFN GGYKWKLA+YP GD KRN
Sbjct: 23  VIRSTRDEKPLHYTLQIQSFSLLKTALVRSDCDRYESRIFNAGGYKWKLAMYPTGDVKRN 82

Query: 73  GS-NHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 132
           GS +H+S YLV AEDDI   T E+N VFTFLVYDSL+DKYLAVQDG +RRFHA+KTEWGF
Sbjct: 83  GSHDHISLYLVKAEDDI--PTSEVNVVFTFLVYDSLKDKYLAVQDGIVRRFHAIKTEWGF 142

Query: 133 EKLVSLDTFNDASNGFLLDKNY---YESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMG 192
           EKL+SLDTFND+SNGFL+D       +    K+EGY WK+WLYPKG S+  +G+ SL++ 
Sbjct: 143 EKLISLDTFNDSSNGFLVDDCCAFGVDVVVMKLEGYRWKLWLYPKGCSNAETGFLSLYLI 202

Query: 193 LDNLEQL 196
           LD+ +++
Sbjct: 203 LDSSKEI 207

[Close]

BLAST of Lag0029701 vs. NCBI nr
Match: XP_022146383.1 (uncharacterized protein LOC111015611 [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 2.2e-62
Identity = 121/191 (63.35%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 8   YAIFAVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNG 67
           Y +  ++R  RDEKP+HYTLQIQ FSLLK ALA+  R+ YES IFN+GG+KWKLALYPNG
Sbjct: 309 YILNDILRSIRDEKPLHYTLQIQPFSLLKTALATCSRERYESPIFNVGGFKWKLALYPNG 368

Query: 68  DKKRNGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKT 127
           DK RNGS ++S YLVTAED+I+S T E+N V TFLVYD+LRD YLAV DGK+RRFHAMKT
Sbjct: 369 DKNRNGSGYISLYLVTAEDEIVSATSEVNVVLTFLVYDNLRDNYLAVLDGKVRRFHAMKT 428

Query: 128 EWGFEKLVSLDTFNDASNGFLLDKNY---YESKPFKVEGYSWKIWLYPKGDSDTSSGYSS 187
           EWGF KLVSL+TFND+SNGFL+D       +    K+E Y WKI L+PKG S  S+G+ S
Sbjct: 429 EWGFGKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKLESYRWKIRLHPKGCSQESAGFLS 488

Query: 188 LFMGLDNLEQL 196
           L++  D+ ++L
Sbjct: 489 LYLIFDSFKEL 499

[Close]

BLAST of Lag0029701 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 4.6e-60
Identity = 125/229 (54.59%), Postives = 152/229 (66.38%), Query Frame = 0


Query: 13  VVRCTRDEKPVHYTLQIQSFSLLKAAL-ASSKRDIYESQIFNIGGYKWKLALYPNGDKKR 72
           V+R +RDEKP+HYTL+IQSFSLLKAA+ ASS R+ YESQIF  GGYKWKLALYPNGD KR
Sbjct: 26  VIRTSRDEKPLHYTLKIQSFSLLKAAVAASSIRNRYESQIFKAGGYKWKLALYPNGDFKR 85

Query: 73  NGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 132
           N +NH+S YLV+AED+I S+ LEI  +  FLVYD+L+D+Y  +QDGK+R FHA+K EWGF
Sbjct: 86  NVANHISLYLVSAEDEISSSGLEIKVMIKFLVYDNLKDRYWTIQDGKVRCFHAIKKEWGF 145

Query: 133 EKLVSLDTFNDASNGFLLD----------------------------------------- 192
           EKLVSLDTFND SNG L+D                                         
Sbjct: 146 EKLVSLDTFNDTSNGLLVDDCCAFGVDVIVMKSYDGNNEILSLIKQLKNYKYTWKINNFS 205

Query: 193 ---KNYYESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
              KN YES PF V+ Y+WKI LYP+GDS   +GY S+F+  D+ E+LP
Sbjct: 206 QLSKNVYESDPFTVDNYTWKIELYPRGDSLAMTGYMSMFLRFDSFEKLP 254

[Close]

BLAST of Lag0029701 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 238.4 bits (607), Expect = 5.1e-59
Identity = 128/229 (55.90%), Postives = 147/229 (64.19%), Query Frame = 0


Query: 12  AVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKR 71
           +VV  TR EKPVHYTL+IQSFSLLK  LASS+R  +ESQ FN G Y+WKLALYPNGD++R
Sbjct: 24  SVVMSTRHEKPVHYTLKIQSFSLLKNGLASSQRQRFESQKFNAGCYEWKLALYPNGDERR 83

Query: 72  NGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 131
           N SNH+S YLV   ++ILSTT E+N VFTFLVYD+LR KYL VQDGKMRRF AMKTEWG 
Sbjct: 84  NVSNHISLYLVIVGNNILSTTSEVNVVFTFLVYDTLRGKYLTVQDGKMRRFSAMKTEWGI 143

Query: 132 EKLVSLDTFNDASNGFLLD----------------------------KNY---------- 191
           EKL+ LDTFNDASNGFL+D                            KNY          
Sbjct: 144 EKLLPLDTFNDASNGFLVDDCCVFGVDIFVMSCDGGMGEVFSLIKQPKNYEYTWKLNNFS 203

Query: 192 ------YESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
                  ES PF VE Y WKI LYP G S   SG+ S+++  D+  QLP
Sbjct: 204 QLGSTLKESNPFTVESYRWKILLYPSGCSKAKSGFLSMYLLFDSSNQLP 252

[Close]

BLAST of Lag0029701 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 4.1e-56
Identity = 119/215 (55.35%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 12  AVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKR 71
           +V+R  RDEKP+HYTLQIQ FSLLK ALA+S RD YES IF++ G+KWKLA+YP+GD KR
Sbjct: 52  SVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKR 111

Query: 72  NGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 131
           NGSNH+S YLVTAEDDI   TL++  VFT LVYD+LRD YLAV DGK+RRFHAMK EWGF
Sbjct: 112 NGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGF 171

Query: 132 EKLVSLDTFNDASNGFLLD------------------------------KNYYESKPFKV 191
           EKLVSL+TFND+SNGFL+D                              K  +++  F  
Sbjct: 172 EKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCDGKGEALSLIKQPKNNKYTWKTNNFSQ 231

Query: 192 EGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
              + K+ LYPKG    S  Y SLF+  ++L++LP
Sbjct: 232 LDENMKMSLYPKGSPKASPDYLSLFLRCESLKELP 264

[Close]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot
Match: Q9M2I9 (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.6e-08
Identity = 38/126 (30.16%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 25  YTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTA 84
           +T  I++FS      +   R  Y  + F + G KW+L  +P G    NG   +S YL  A
Sbjct: 9   FTWVIKNFS------SQQSRKNYSDEFF-VDGCKWRLLAFPKG----NGVEKLSLYLAVA 68

Query: 85  EDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFEKLVSLDTFNDAS 144
             + L      +A F F V + L D+    ++ K   F A  ++WGF  ++SL   +D  
Sbjct: 69  GSEFLPDGWRRHAYFHFSVVNQLSDELSQARETK-NWFDASTSDWGFTSMLSLKKLHDKD 122

Query: 145 NGFLLD 151
            GFL++
Sbjct: 129 GGFLVN 122

[Close]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 29  IQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTAEDDI 88
           I++FS L++        IY  Q F I G +W+L  +P G+  +  S+H+S YL  AE + 
Sbjct: 15  IKNFSSLQS------EKIYSDQ-FVIDGCRWRLLAFPKGNDTK--SDHLSLYLDVAESES 74

Query: 89  LSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFEKLVSLDTFNDASNGFL 148
           L      +A F+F + + + +K  + +   +  F    ++WGF  LV L       +GFL
Sbjct: 75  LPCGWRRHAQFSFTIVNHIPEK-CSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFL 125

Query: 149 L 150
           +
Sbjct: 135 V 125

[Close]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-05
Identity = 34/126 (26.98%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 25  YTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTA 84
           +T  IQ+FS       SS+  +  S  F IGG KW+L +YP G  K    +H+S +L  A
Sbjct: 9   FTWVIQNFS-------SSQSRVVPSNQFVIGGCKWRLLVYPEGFNK--SGDHLSLFLEVA 68

Query: 85  EDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFEKLVSLDTFNDAS 144
           +   L      +A +   + +   DK ++ ++   + F+     WG   ++ L   +   
Sbjct: 69  DPRSLPPGWSRHARYLLTIVNQHSDK-ISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKD 124

Query: 145 NGFLLD 151
            GFL++
Sbjct: 129 GGFLVN 124

[Close]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot
Match: D5K228 (Protein RESTRICTED TEV MOVEMENT 3 OS=Arabidopsis thaliana OX=3702 GN=RTM3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.6e-05
Identity = 32/112 (28.57%), Postives = 50/112 (44.64%), Query Frame = 0


Query: 40  ASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTAEDDILSTTLEINAVF 99
           AS   D+  S  F +GG KW L  YP G    N +N +S +L  A    L +    +  F
Sbjct: 17  ASLLSDLIYSDHFVVGGCKWHLRAYPKG---YNNANSLSLFLGVAVPTSLPSGWRRHTKF 76

Query: 100 TFLVYDSLRDKYLAVQDGKMRR-FHAMKTEWGFEKLVSLDTFNDASNGFLLD 151
              + + L DK    +  ++ + F    T WG   +  L+  +   +GFLL+
Sbjct: 77  RLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFLLN 125

[Close]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot
Match: Q9M2H9 (MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis thaliana OX=3702 GN=At3g58370 PE=4 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 2.9e-04
Identity = 37/126 (29.37%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 25  YTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRNGSNHVSFYLVTA 84
           +T  I++FS L       + D   S  F IGG KW L  YP G+K    +N +S YLV  
Sbjct: 10  FTWVIKNFSTL-------QYDKIYSDPFVIGGCKWHLLAYPKGNK---FNNSLSLYLVVD 69

Query: 85  EDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFEKLVSLDTFNDAS 144
           +   L       A F+  + + L DK L+ +  K   F+      GF  ++ L   +  +
Sbjct: 70  DARALPCGWRRYAQFSLTIINQLTDK-LSQRGEKQNWFNQRNLGSGFTSMIPLPNLHAKN 124

Query: 145 NGFLLD 151
            G+L++
Sbjct: 130 AGYLVN 124

[Close]

BLAST of Lag0029701 vs. ExPASy TrEMBL
Match: A0A6J1CXZ0 (ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=LOC111015607 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.8e-64
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 13  VVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRN 72
           V+R TRDEKP+HYTLQIQSFSLLK AL  S  D YES+IFN GGYKWKLA+YP GD KRN
Sbjct: 23  VIRSTRDEKPLHYTLQIQSFSLLKTALVRSDCDRYESRIFNAGGYKWKLAMYPTGDVKRN 82

Query: 73  GS-NHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 132
           GS +H+S YLV AEDDI   T E+N VFTFLVYDSL+DKYLAVQDG +RRFHA+KTEWGF
Sbjct: 83  GSHDHISLYLVKAEDDI--PTSEVNVVFTFLVYDSLKDKYLAVQDGIVRRFHAIKTEWGF 142

Query: 133 EKLVSLDTFNDASNGFLLDKNY---YESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMG 192
           EKL+SLDTFND+SNGFL+D       +    K+EGY WK+WLYPKG S+  +G+ SL++ 
Sbjct: 143 EKLISLDTFNDSSNGFLVDDCCAFGVDVVVMKLEGYRWKLWLYPKGCSNAETGFLSLYLI 202

Query: 193 LDNLEQL 196
           LD+ +++
Sbjct: 203 LDSSKEI 207

[Close]

BLAST of Lag0029701 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.1e-62
Identity = 121/191 (63.35%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 8   YAIFAVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNG 67
           Y +  ++R  RDEKP+HYTLQIQ FSLLK ALA+  R+ YES IFN+GG+KWKLALYPNG
Sbjct: 309 YILNDILRSIRDEKPLHYTLQIQPFSLLKTALATCSRERYESPIFNVGGFKWKLALYPNG 368

Query: 68  DKKRNGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKT 127
           DK RNGS ++S YLVTAED+I+S T E+N V TFLVYD+LRD YLAV DGK+RRFHAMKT
Sbjct: 369 DKNRNGSGYISLYLVTAEDEIVSATSEVNVVLTFLVYDNLRDNYLAVLDGKVRRFHAMKT 428

Query: 128 EWGFEKLVSLDTFNDASNGFLLDKNY---YESKPFKVEGYSWKIWLYPKGDSDTSSGYSS 187
           EWGF KLVSL+TFND+SNGFL+D       +    K+E Y WKI L+PKG S  S+G+ S
Sbjct: 429 EWGFGKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKLESYRWKIRLHPKGCSQESAGFLS 488

Query: 188 LFMGLDNLEQL 196
           L++  D+ ++L
Sbjct: 489 LYLIFDSFKEL 499

[Close]

BLAST of Lag0029701 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.0e-56
Identity = 119/215 (55.35%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 12  AVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKR 71
           +V+R  RDEKP+HYTLQIQ FSLLK ALA+S RD YES IF++ G+KWKLA+YP+GD KR
Sbjct: 52  SVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKR 111

Query: 72  NGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 131
           NGSNH+S YLVTAEDDI   TL++  VFT LVYD+LRD YLAV DGK+RRFHAMK EWGF
Sbjct: 112 NGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGF 171

Query: 132 EKLVSLDTFNDASNGFLLD------------------------------KNYYESKPFKV 191
           EKLVSL+TFND+SNGFL+D                              K  +++  F  
Sbjct: 172 EKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCDGKGEALSLIKQPKNNKYTWKTNNFSQ 231

Query: 192 EGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
              + K+ LYPKG    S  Y SLF+  ++L++LP
Sbjct: 232 LDENMKMSLYPKGSPKASPDYLSLFLRCESLKELP 264

[Close]

BLAST of Lag0029701 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54
Identity = 115/227 (50.66%), Postives = 137/227 (60.35%), Query Frame = 0


Query: 13  VVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKRN 72
           V+R TRDEKP+HYTLQIQSFSLLKAALASS RD YESQIFN GGYKWKLA+YPNGD KRN
Sbjct: 8   VIRSTRDEKPLHYTLQIQSFSLLKAALASSNRDRYESQIFNAGGYKWKLAVYPNGDVKRN 67

Query: 73  GSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGFE 132
           G++H+S YLV A+DDI   +                        GK+RRFHAMK EWGFE
Sbjct: 68  GADHISLYLVKADDDINPCS-----------------------HGKVRRFHAMKAEWGFE 127

Query: 133 KLVSLDTFNDASNGFL-------------------------------------------L 192
           KL+SLDTFND+SNGF+                                           L
Sbjct: 128 KLISLDTFNDSSNGFVVGDCCGFGVDVVVMKCDGKGEVVSFIKEPKSHKYTWKTKNFSQL 187

Query: 193 DKNYYESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
           DK +YES PF VEGY WK+WLYPKG S   +G+ SL++  ++ E++P
Sbjct: 188 DKKFYESDPFTVEGYRWKLWLYPKGSSKAKTGFLSLYLSYNSYEEIP 211

[Close]

BLAST of Lag0029701 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.2e-54
Identity = 117/229 (51.09%), Postives = 140/229 (61.14%), Query Frame = 0


Query: 12  AVVRCTRDEKPVHYTLQIQSFSLLKAALASSKRDIYESQIFNIGGYKWKLALYPNGDKKR 71
           +VV  +R EKPVHY L+IQSFSLLK  LA S R  +ESQ FN GGY+WKLALYPNGD++R
Sbjct: 27  SVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGYEWKLALYPNGDQRR 86

Query: 72  NGSNHVSFYLVTAEDDILSTTLEINAVFTFLVYDSLRDKYLAVQDGKMRRFHAMKTEWGF 131
           + S+H+S YLV   D+ILSTT E+NAVFTFLVYD+LR KYL VQDGKMRRF A KTEWG 
Sbjct: 87  DVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGI 146

Query: 132 EKLVSLDTFNDASNGFL------------------------------------------- 191
           EKL+ L+TF DASNGFL                                           
Sbjct: 147 EKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFS 206

Query: 192 -LDKNYYESKPFKVEGYSWKIWLYPKGDSDTSSGYSSLFMGLDNLEQLP 197
            LD +  E  PF VE   WKI L+P GD     G+ S+++ L NL++ P
Sbjct: 207 KLDSSLRECNPFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFP 255

The following BLAST results are available for this feature:

BLAST of Lag0029701 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146379.1	2.0e-63	66.84	ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]	[more]
XP_022146383.1	2.2e-62	63.35	uncharacterized protein LOC111015611 [Momordica charantia]	[more]
XP_038874970.1	4.6e-60	54.59	uncharacterized protein LOC120067490 [Benincasa hispida]	[more]
XP_038875772.1	5.1e-59	55.90	uncharacterized protein LOC120068142 [Benincasa hispida]	[more]
XP_022146382.1	4.1e-56	55.35	uncharacterized protein LOC111015610 [Momordica charantia]	[more]

BLAST of Lag0029701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2I9	9.6e-08	30.16	MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis t...	[more]
Q9M2J1	1.5e-05	29.75	MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t...	[more]
Q9M2J5	5.8e-05	26.98	MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis t...	[more]
D5K228	7.6e-05	28.57	Protein RESTRICTED TEV MOVEMENT 3 OS=Arabidopsis thaliana OX=3702 GN=RTM3 PE=1 S...	[more]
Q9M2H9	2.9e-04	29.37	MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis t...	[more]

BLAST of Lag0029701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXZ0	9.8e-64	66.84	ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1CYF6	1.1e-62	63.35	uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CZF7	2.0e-56	55.35	uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CX47	1.4e-54	50.66	probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX...	[more]
A0A0A0KND8	9.2e-54	51.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	SMART	SM00061	math_3	coord: 27..140 e-value: 2.8E-6 score: 36.8
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 44..143 e-value: 1.6E-10 score: 41.2
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 22..159 score: 22.129667
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 24..145 e-value: 7.20638E-18 score: 73.9526
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 145..196 e-value: 2.18253E-6 score: 43.1367
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 152..196 e-value: 7.2E-8 score: 34.5
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 14..151 e-value: 5.7E-31 score: 109.4
None	No IPR available	PANTHER	PTHR46162	TRAF-LIKE FAMILY PROTEIN	coord: 17..150
None	No IPR available	PANTHER	PTHR46162:SF40	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12-LIKE	coord: 17..150 coord: 152..194
None	No IPR available	PANTHER	PTHR46162	TRAF-LIKE FAMILY PROTEIN	coord: 152..194
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 22..150
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 152..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029701.1	Lag0029701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding