Lag0029687 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029687
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr8: 41184408 .. 41187987 (+)
RNA-Seq Expression	Lag0029687
Synteny	Lag0029687

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATAGAATCCAAATGTTTGAGAAAGCAACCTTATCCAAACAAAACTCCTCCGTTGAATAAAGGACCACTTACTGCCTCTCAAGGTTGCCAAAACTTGCACAAGACATTCATTATGAGATTCTAGTCTTAGAATAACCCAATATGTCATCAACGCACACTACCATGAACAAGTCAAAAGGCTTTGAAGACTAGCTTAATAAGATCAATAAAAACTACATGAGCATCAGTAAGTCCAAAAGACATCATGATAAGCTTGTGATGCCCATACCCGACTTTGAAGGAAATCTTTAGAATGCCTACTCCTTAACCTTTAACCAATGAAAACCCCATCACAAATCTAACCTTAAACCTTTGCTCTTGAAGTTGGTCAAACAACTACCAATGCAATGGAGATCAGGATATTTGTCTTTCACTTTCACATTGTTCAGATCCAATGGCCACTACAAAGCTTTTTGAACCGTTCTTTTCCTTACGAACAAAATTGGGGAGGTGACACACTGGGACAATAATCCCTCGTCCAATATCCTTACAAATACAACTTCAATTCCTTCATTTCAACTGGTGACATTCAATAGATGCCTTAGGTAATTGGGCTATCCCAAGTAATAACTCTAAACATAAGTCTATAACACTTTCAAAGAATGCTCAAGCACCAAGCTACAAGAGATACTTGACCTTTGGGACAAAGGCTATATTTGCATTTCCAACTTTCATTCCTTTGAGTCCGGAACTTGGCCAAATGGTAACCTAAAGTGAACTTCCTTCTTAGACCATCCCATTTTTCATAATCAGAAACCAACCAATTCACACCCACGATATGTCGAACTCTTGCATATTCCAACTTAACAACCTTGCTCCATGGGTCTTGCTCGCATAGAAAGTCCAACTCCACTACTTCCTATGGAAATTTCTTGAATCCTCAAGGTGTTGGGCTCTCTTGCTAGAATCTTAAGTCAACTTACTAACCTTCCAAGGTAAAGAAAGATCTCACCTTAAGCTTTAAGGCAACAATCTAACCTGCTAACACACAACAAGCACAAACCAAAAACACAAAAGCTAACTAAGAAACTATAGCAGCGTCTTATGCTGCTAGCAAACAACAAGCACAAGATCAGAACATGTTATCTGGCTAACTATGGGAGCATCCTACTCCTTGAAGCAAACAATATGCACACAACCAAGCAAGCTATCTAACCGACTAAATATCTAACCGACTAAATGGAGCATCCTAAACCTAGCTACTACAAGATAAAGCAACAATGGAAGTCAAAATATGCTCAAACTAAGGACTCAAAAACTTGTTCCTTTTTCCAAACATTTTCTTTGAAATTCTTGATCCATTGCTCCCAACTCTCCTCTAAAATTTCCCTTTTCCAAACGTTCTTTTTGAAATTTGTGGTTATTTCTTCCCAACACAACATCAAAAACTTTTCCTTTTCAAACGTTCCTTTGAAGTTCTTGATTCTTAGAACCCAACTTTTGTCCAAAAAGTTTTCCTTTTCCAAAAGTTCTCTTTGAAATTCTTGGTGCTTTTTTCCAAACTTTTGTCCAAATTTTCTTCTCCAAATATTCTCTTTGAAGTTCTTGGTCTTTTTTTCCCAACTCTTTTATGAATATTTTCCCTTTCAAAACATTCCTTTTGAAATTCTTGGTTCTTTTTCTCAACTCTTCTCCAAAAACTTTCATGTTTCCAAACGTTCTACTAGGAATTCTTAGGTTTTCTTCCTAACTTTTCTCCAAAAAATTTTCCTCTTCTAAACGTTCTCCTTGAAATTCTTGGTCATTTATTTCCAATTTTTCTCCAAAAAGTTTTACTTTTCCAAACATGTTCCTTGAAATACTTGATCCATTCAAAGTCCAAGGCCTTTATTGAATCGTCTGTGCAATTTCCAGGGGTGAAAAATCAATTTGTCAAAGGAATTGTTTGTTCTTCCAACCCTAAAGTTCATTCTTCTATAGATTCTGATGATGAGTCTTCGGTTAGTGTGAGTAGTGATGATTCTGGGTCTTTGATTGCTGAAGAAGATTGTGTTGGACTCCTCCAAAATGATCAATTTGATGAGTTTTTGGCTTCTTTTTTTCCAGGGGAGGATTTTGGTTTTGGCAATCAGATTCAAGATACCTTGTTGTCTCCTTCTCAAATCCCTAATGAGTTCTCTTTACTAGTGGAAACTTGTGGACTTCAATTGTGCAAGATTTCATCTCCATCACCTAAAGTCTTAGATTGATTACTTTTCATCGGTTATGAAGATTATCTCTTGGAATACATGGGGTCTTGGTGACAAATCTAAAAGGGTGTCATTGAAAAAATTCCTTCAGAATATTTGTCCTGATTTGGTCTTGATTCAGGAAACAAAACAGTCGAAAATTGATTTAAAATTCATTAAATCTTTGTGGAGTTCAAAGGAAATTGGATGGACTTTTGTGGAAGCTTATGGGAAATCAGGAGGTCTTCTTATTATGTGGGATGAAAGCAAATTATCAGTGCTGGAATTCTTAAAGGGTGGTTATACTCTTTCAATTAAATGTCTTACTCTTTGTATAAAAGTTTGTTGGGTCCCCAATGTTTATGGTCCAAATGACTACAAGGAAAGGAGATTCTTATGGCCTGAATTGCGTTCCCTCTCTTACTATTGCACGGATCCATGGTGTATTGGTGGAAACTTTAATATTACTCGATGGGTTCATGAGAGATCTCCTATGGTAAGACAAACTAAAGGTATGCGAAAATTTTAATACTTCAGTGCTGGAAATGGCTTTATTCAGTCCAAGGAATTAATGGAATCCTCCCTCAGAGTCCAAGGGTAAAAGACATTTTTAAAGAGGCGTTGGGTTCTCCAAAAGGTGCTTCTTTGCATGAAGAGTGCATTAATAACGCTCTCTGTAAAATATTAATGTCAGCATTCATACGCCGGCTTCTTTTCTCTCTCCTTCCAATGTTGTTAATGCTATTAACGTCTCTAGCTATCAGGAAGTCCAGTTGCCTCTGATTTTTGAATCTCCTTCCAAGAAGTTTATTGCTGTTAATAATGCTAATTGAAATTTAAAAGTTGATGTCCATCAGCCCGAAGGAAGTCCAGCTGCTGTTGTCTTTTGTTTCTCCTCCCAAAGATATTAATTGATGATGTTAGCATTGTAAATGGGTGCATTCAGCATGCTTATTTAAAGACTTATTCTTGGAAAAAAGGGTCTCAAAGTCCAGCTGTCTCAGGTTTTTTGAATCTCCTTCTAAGAAGGTTAATTGAATATTAAAGGATGATGTCCAGCACGCTTCAGGATTTTCAAATATCAGTGCTGGAAATGGGTTGTTCCAGGCCAAGTGGAGTTGAAAGTGGACAAGTTCAGCTCTTCAGAATTGTTCAAAAGTTCTTTCTAAGGCAGCAGATCCTAGGAGGTTTAATACTGGAACAACTTTTGTATTCACCGGCCAAATAGCCCATGGATATTCTGTTTCAGCAACTATGAAGTCGGTGGAAGGTTGGCCGGAGAGTTTTGGTAGGTTGCTCAAGCTTCTGGATGTTTCTTCAGTTACTATATTTGGAAAGTTTCAGCCATTTCTTGGATACTCCATCTGA

mRNA sequence

ATGTCCATAGAATCCAAATGTTTGAGAAAGCAACCTTATCCAAACAAAACTCCTCCGTTGAATAAAGGACCACTTACTGCCTCTCAAGGGGTGAAAAATCAATTTGTCAAAGGAATTGTTTGTTCTTCCAACCCTAAAGTTCATTCTTCTATAGATTCTGATGATGAGTCTTCGGTTAGTGTGAGTAGTGATGATTCTGGGTCTTTGATTGCTGAAGAAGATTGTGTTGGACTCCTCCAAAATGATCAATTTGATGAGTTTTTGGCTTCTTTTTTTCCAGGGGAGGATTTTGGTTTTGGCAATCAGATTCAAGATACCTTGTTGTCTCCTTCTCAAATCCCTAATGAGTTCTCTTTACTAGTGGAAACTTGTGGACTTCAATTGTGCAAGATTTCATCTCCATCACCTAAAGAAACAAAACAGTCGAAAATTGATTTAAAATTCATTAAATCTTTGTGGAGTTCAAAGGAAATTGGATGGACTTTTGTGGAAGCTTATGGGAAATCAGGAGGTCTTCTTATTATGTGGGATGAAAGCAAATTATCAGTGCTGGAATTCTTAAAGGGTGGTTATACTCTTTCAATTAAATGTCTTACTCTTTGTATAAAAGTTTGTTGGGTCCCCAATGTTTATGGTCCAAATGACTACAAGGAAAGGAGATTCTTATGGCCTGAATTGCGTTCCCTCTCTTACTATTGCACGGATCCATGGTGTATTGGTGGAAACTTTAATATTACTCGATGGGTTCATGAGAGATCTCCTATGCATGCTTATTTAAAGACTTATTCTTGGAAAAAAGGGTCTCAAAGTCCAGCTGTCTCAGCAGATCCTAGGAGGTTTAATACTGGAACAACTTTTGTATTCACCGGCCAAATAGCCCATGGATATTCTGTTTCAGCAACTATGAAGTCGGTGGAAGGTTGGCCGGAGAGTTTTGGTAGGTTGCTCAAGCTTCTGGATGTTTCTTCAGTTACTATATTTGGAAAGTTTCAGCCATTTCTTGGATACTCCATCTGA

Coding sequence (CDS)

ATGTCCATAGAATCCAAATGTTTGAGAAAGCAACCTTATCCAAACAAAACTCCTCCGTTGAATAAAGGACCACTTACTGCCTCTCAAGGGGTGAAAAATCAATTTGTCAAAGGAATTGTTTGTTCTTCCAACCCTAAAGTTCATTCTTCTATAGATTCTGATGATGAGTCTTCGGTTAGTGTGAGTAGTGATGATTCTGGGTCTTTGATTGCTGAAGAAGATTGTGTTGGACTCCTCCAAAATGATCAATTTGATGAGTTTTTGGCTTCTTTTTTTCCAGGGGAGGATTTTGGTTTTGGCAATCAGATTCAAGATACCTTGTTGTCTCCTTCTCAAATCCCTAATGAGTTCTCTTTACTAGTGGAAACTTGTGGACTTCAATTGTGCAAGATTTCATCTCCATCACCTAAAGAAACAAAACAGTCGAAAATTGATTTAAAATTCATTAAATCTTTGTGGAGTTCAAAGGAAATTGGATGGACTTTTGTGGAAGCTTATGGGAAATCAGGAGGTCTTCTTATTATGTGGGATGAAAGCAAATTATCAGTGCTGGAATTCTTAAAGGGTGGTTATACTCTTTCAATTAAATGTCTTACTCTTTGTATAAAAGTTTGTTGGGTCCCCAATGTTTATGGTCCAAATGACTACAAGGAAAGGAGATTCTTATGGCCTGAATTGCGTTCCCTCTCTTACTATTGCACGGATCCATGGTGTATTGGTGGAAACTTTAATATTACTCGATGGGTTCATGAGAGATCTCCTATGCATGCTTATTTAAAGACTTATTCTTGGAAAAAAGGGTCTCAAAGTCCAGCTGTCTCAGCAGATCCTAGGAGGTTTAATACTGGAACAACTTTTGTATTCACCGGCCAAATAGCCCATGGATATTCTGTTTCAGCAACTATGAAGTCGGTGGAAGGTTGGCCGGAGAGTTTTGGTAGGTTGCTCAAGCTTCTGGATGTTTCTTCAGTTACTATATTTGGAAAGTTTCAGCCATTTCTTGGATACTCCATCTGA

Protein sequence

MSIESKCLRKQPYPNKTPPLNKGPLTASQGVKNQFVKGIVCSSNPKVHSSIDSDDESSVSVSSDDSGSLIAEEDCVGLLQNDQFDEFLASFFPGEDFGFGNQIQDTLLSPSQIPNEFSLLVETCGLQLCKISSPSPKETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIKCLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSPMHAYLKTYSWKKGSQSPAVSADPRRFNTGTTFVFTGQIAHGYSVSATMKSVEGWPESFGRLLKLLDVSSVTIFGKFQPFLGYSI

Homology

[Close]

BLAST of Lag0029687 vs. NCBI nr
Match: KAA0063088.1 (uncharacterized protein E6C27_scaffold623G00050 [Cucumis melo var. makuwa] >TYK02044.1 uncharacterized protein E5676_scaffold680G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 4.6e-39
Identity = 73/118 (61.86%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +E+K+ + D+ FIKSLWSSK+ GW   E +G SGG+L +WD SKL V+E LKGGY+LSI 
Sbjct: 239 QESKKEEFDIVFIKSLWSSKDNGWELFEPFGHSGGILTLWDMSKLKVIETLKGGYSLSIN 298

Query: 197 CLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSP 255
            +T+C K CW+ NVYGPND+KERR +WPEL SLS YCT  WCI G+ NI RW HER P
Sbjct: 299 HITVCKKSCWITNVYGPNDHKERRLVWPELLSLSNYCTKAWCISGDSNIRRWAHERFP 356

[Close]

BLAST of Lag0029687 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 5.6e-37
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 143 KIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIKCLTLCI 202
           +ID+  IKSLWSSK+IGW  VE++G+ GG+L MWD SK+ V+E LKGGY+LSI  +T C 
Sbjct: 81  EIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYSLSINSITSCK 140

Query: 203 KVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSPM 256
           K CW+ NVYGP DY+ERRF+W  L SLS YCT  WCIGG  NITRW HE  P+
Sbjct: 141 KSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHECFPL 193

[Close]

BLAST of Lag0029687 vs. NCBI nr
Match: XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 7.6e-34
Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +ETK+ +I+  FIKSLWSSKE+G  FVEA GKSGGLL +WD+SK+ V    K  ++LSIK
Sbjct: 35  QETKKDRIEGSFIKSLWSSKEVGCAFVEAKGKSGGLLTVWDDSKILVSSISKDEFSLSIK 94

Query: 197 CLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSPM 256
           C T+  K+CW+ NVYGP DY+ERR LW EL SL+    DPWCIGG+FN  R  HER P+
Sbjct: 95  CQTINKKICWITNVYGPCDYQERRRLWAELSSLAEKLDDPWCIGGDFNSIRRRHERYPV 153

[Close]

BLAST of Lag0029687 vs. NCBI nr
Match: XP_031739979.1 (uncharacterized protein LOC116403332 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-21
Identity = 47/117 (40.17%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +++K S ++   +KS+WSS  +GW  +EAYG SGG+LI+W E  ++V++ ++G +++SI 
Sbjct: 28  QKSKVSTVNRHLVKSVWSSWFVGWATLEAYGSSGGILILWKEDSITVVDSIQGQFSISIH 87

Query: 197 CLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERS 254
                    W+  VYGP+ Y+ R   W EL SL   C + WC+GG+FN+ RW++E+S
Sbjct: 88  WKFNAGFSGWITGVYGPSSYRLRDQFWWELSSLYGLCNENWCVGGDFNVVRWLNEKS 144

[Close]

BLAST of Lag0029687 vs. NCBI nr
Match: KAA0045287.1 (uncharacterized protein E6C27_scaffold316G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-20
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 108 LSPSQIPNEFSLLVETCGLQLCKISSPSPKETKQSKI--DLKFIKSLWSSKEIGWTFVEA 167
           L  S +  E  + ++T G++ CK          +SKI      IK+LWS  +IG  F+E+
Sbjct: 39  LMNSDLLEESGVKIQTLGVE-CK--------RGKSKILPTASLIKALWSLNDIGQDFIES 98

Query: 168 YGKSGGLLIMWDESKLSVLEFLKGGYTLSIKCLTLCIKVCWVPNVYGPNDYKERRFLWPE 227
            G+SGG+L MWDES++SV E +KG + LS+KC T+C K CW+ NVYGP  ++ER+ +W E
Sbjct: 99  IGRSGGILTMWDESEISVPEVIKGRFALSVKCTTICKKPCWISNVYGPTLHQERKLIWLE 157

Query: 228 LRSLSYYC 234
           L   +  C
Sbjct: 159 LSFFAALC 157

[Close]

BLAST of Lag0029687 vs. ExPASy TrEMBL
Match: A0A5A7V639 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00270 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-39
Identity = 73/118 (61.86%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +E+K+ + D+ FIKSLWSSK+ GW   E +G SGG+L +WD SKL V+E LKGGY+LSI 
Sbjct: 239 QESKKEEFDIVFIKSLWSSKDNGWELFEPFGHSGGILTLWDMSKLKVIETLKGGYSLSIN 298

Query: 197 CLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSP 255
            +T+C K CW+ NVYGPND+KERR +WPEL SLS YCT  WCI G+ NI RW HER P
Sbjct: 299 HITVCKKSCWITNVYGPNDHKERRLVWPELLSLSNYCTKAWCISGDSNIRRWAHERFP 356

[Close]

BLAST of Lag0029687 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.7e-37
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 143 KIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIKCLTLCI 202
           +ID+  IKSLWSSK+IGW  VE++G+ GG+L MWD SK+ V+E LKGGY+LSI  +T C 
Sbjct: 81  EIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETLKGGYSLSINSITSCK 140

Query: 203 KVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSPM 256
           K CW+ NVYGP DY+ERRF+W  L SLS YCT  WCIGG  NITRW HE  P+
Sbjct: 141 KSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHECFPL 193

[Close]

BLAST of Lag0029687 vs. ExPASy TrEMBL
Match: A0A5A7TTX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00450 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-20
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 108 LSPSQIPNEFSLLVETCGLQLCKISSPSPKETKQSKI--DLKFIKSLWSSKEIGWTFVEA 167
           L  S +  E  + ++T G++ CK          +SKI      IK+LWS  +IG  F+E+
Sbjct: 39  LMNSDLLEESGVKIQTLGVE-CK--------RGKSKILPTASLIKALWSLNDIGQDFIES 98

Query: 168 YGKSGGLLIMWDESKLSVLEFLKGGYTLSIKCLTLCIKVCWVPNVYGPNDYKERRFLWPE 227
            G+SGG+L MWDES++SV E +KG + LS+KC T+C K CW+ NVYGP  ++ER+ +W E
Sbjct: 99  IGRSGGILTMWDESEISVPEVIKGRFALSVKCTTICKKPCWISNVYGPTLHQERKLIWLE 157

Query: 228 LRSLSYYC 234
           L   +  C
Sbjct: 159 LSFFAALC 157

[Close]

BLAST of Lag0029687 vs. ExPASy TrEMBL
Match: A0A1U8B190 (uncharacterized protein LOC104606223 OS=Nelumbo nucifera OX=4432 GN=LOC104606223 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-20
Identity = 46/126 (36.51%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +E+K   +D ++++S W S+ +GW+   ++G SGG++ +W E  + V+E L G +++SIK
Sbjct: 35  QESKLMXLDGRWVRSFWRSRGLGWSLAPSWGASGGIVTLWKEDVVEVVEELIGRFSVSIK 94

Query: 197 CLTLCIKVCWV-PNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHERSPM 256
           C  +     WV  NVYGPN Y+ER  +W EL ++      PWC+ G+FN+ R+  E S  
Sbjct: 95  CKNVENGCVWVLTNVYGPNSYRERNEMWEELYAIKGLWDGPWCLSGDFNVIRFSDETSNP 154

Query: 257 HAYLKT 262
              + T
Sbjct: 155 QQVIST 160

[Close]

BLAST of Lag0029687 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-19
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 137 KETKQSKIDLKFIKSLWSSKEIGWTFVEAYGKSGGLLIMWDESKLSVLEFLKGGYTLSIK 196
           +E K++ +D +FI S+W S+   W  + A G+SGG L++WD   +SVL+ L G +++S+ 
Sbjct: 35  QEVKRATVDRRFIGSIWRSRFKAWILLPAIGRSGGTLLIWDTRIISVLDSLVGEFSISVL 94

Query: 197 CLTLCIKVCWVPNVYGPNDYKERRFLWPELRSLSYYCTDPWCIGGNFNITRWVHER 253
                 +  W   VYGP  YK R   W EL  LS  C + WC+GG+FN+TR V E+
Sbjct: 95  INAEGKEPWWFSGVYGPCSYKIRHVFWDELAGLSSICGESWCVGGDFNVTRRVGEK 150

The following BLAST results are available for this feature:

BLAST of Lag0029687 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063088.1	4.6e-39	61.86	uncharacterized protein E6C27_scaffold623G00050 [Cucumis melo var. makuwa] >TYK0...	[more]
TYJ98683.1	5.6e-37	62.83	hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]	[more]
XP_038876676.1	7.6e-34	59.66	uncharacterized protein LOC120069076 [Benincasa hispida]	[more]
XP_031739979.1	1.1e-21	40.17	uncharacterized protein LOC116403332 [Cucumis sativus]	[more]
KAA0045287.1	3.6e-20	42.19	uncharacterized protein E6C27_scaffold316G00450 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0029687 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0029687 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V639	2.2e-39	61.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BHE3	2.7e-37	62.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TTX5	1.8e-20	42.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1U8B190	8.7e-20	36.51	uncharacterized protein LOC104606223 OS=Nelumbo nucifera OX=4432 GN=LOC104606223...	[more]
A0A803P8A0	1.5e-19	40.52	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0029687 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 121..296 e-value: 4.6E-8 score: 35.1
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 142..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 138..249
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 138..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029687.1	Lag0029687.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0004518	nuclease activity