Lag0029659 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAGTAAGATCGTGAGACGAGCTGATTGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAATTTGATTGGGAAGGAGATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTAAAATTAACTAGATTTCCTTTATATACATGTTTAAGTGGTAAAATTAATTACTTCCCTTCATTTTATTTAGGTTTTTCAAAAGATCAAGTGCGGATCACCTTGAACGAAGGAATGAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTCAATGTCACTCGTTTGAATGAGCGCATACCAATTAAACCTGACTGTTCATTAAATGATGTTTCTGCAAATCTGTCCGACGAAACTCTTACGGTTACGTTCAGCAAAATATAA ATGTCGAGTAAGATCGTGAGACGAGCTGATTGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAATTTGATTGGGAAGGAGATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAAGATCAAGTGCGGATCACCTTGAACGAAGGAATGAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTCAATGTCACTCGTTTGAATGAGCGCATACCAATTAAACCTGACTGTTCATTAAATGATGTTTCTGCAAATCTGTCCGACGAAACTCTTACGGTTACGTTCAGCAAAATATAA ATGTCGAGTAAGATCGTGAGACGAGCTGATTGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAATTTGATTGGGAAGGAGATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAAGATCAAGTGCGGATCACCTTGAACGAAGGAATGAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTCAATGTCACTCGTTTGAATGAGCGCATACCAATTAAACCTGACTGTTCATTAAATGATGTTTCTGCAAATCTGTCCGACGAAACTCTTACGGTTACGTTCAGCAAAATATAA MSSKIVRRADWRNITQSKQPFSPKFDWEGDDKSWTLTMKLEGFSKDQVRITLNEGMKTLLVTGQKQDGFNVTRLNERIPIKPDCSLNDVSANLSDETLTVTFSKI Homology
BLAST of Lag0029659 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0
BLAST of Lag0029659 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata]) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21 Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0
BLAST of Lag0029659 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Lag0029659 vs. NCBI nr
Match: KAG6578833.1 (Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 4.0e-10 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Lag0029659 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 69.7 bits (169), Expect = 1.7e-08 Identity = 30/98 (30.61%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Lag0029659 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 23/87 (26.44%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lag0029659 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 23/87 (26.44%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lag0029659 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 23/87 (26.44%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lag0029659 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.9e-05 Identity = 23/87 (26.44%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of Lag0029659 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 23/87 (26.44%), Postives = 44/87 (50.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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