
Lag0029646 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCTTGTAGAAGAGAATCATGTAGAAGATTTGTGGAAACAAACTTGGTTGCCTGAGGATTTGGAAAAGTTGGCTATAACCAAGGTTGATTTTGAGGTGATCGAATAATCTTTTTTACAAAGCTTATTTCACAGAAGTAATTGCTTTTCCAAATGAATGTTAATGACTATTTTTGTTCTCCTCTCTTTTTTCTCACGATTTTTCAATTAAAATGGTGCAACCTTCCTCAAAAAGAGAAGGGTAAATTGGGAAGATATTGGAGGCTTAGAACAGCTCCGAAGAGAGTTAAATCGCCATTTAGTTAGGCCTATAAAGTATCCAGAAGATTGCGAGGTCCTTTTTTTCTTTTTCTTTTCATTTATATTTGGAATATATCATTATTTTTGTTTCCTCGCTTTCTTACTACCATTGCTCAATCTCTTTTAGCAGCCAATTGAAGAAGATTTTTCAAAACAACTCTTTGGTTTAGGTTTTTGTGAGCTTTGTTTCCTCAGTTTTGTAAATTTAATTTTATCAATGAAATCACTATTTCTTACAAATAAAGTCAAGAATCAAAGGAAGCTTTCCTTCTCATCCCTTTGTTTGCAAAGTTGAGAATGTTTTCTTTTCATGGTCTGGTCTTGACTGCATTCTGTCATCTTTTTCCTAAGACAAATTTATTTCTCTTAGTTATTATTATTCGTTGGATATAGTTTATTTCCTTCTTTTTCCCTCTTCTCACTGTAAATTCTAATGGTTTCCATCCAAAAATTAACGAGAAGGGTATTTTTGAAATATTTTTCAAAGTTCAGGGGTATTTTTGAAACTTTTTAAAGTTCAGGGGCATTTTTGAAACAAACCCCATAGTTTAGGGGTATTTTTTATAATTTAGCCTATTTTCTTTGATGAAGTATGTGACTTTCTTTTGCTATTTGGTAGTGCTCGTTGTTGTTTATTATTTTCATATATATGACTTAGGGTTGGGGGAACCAGGAATATATCTGTGTTATGAATATTACTTTAGAGATATGTGTTTACTATGAAGCCAGACAAAACGAAATAGGTGACAATAAATCAACTCAATAAAACTCCACCTATGAATTTGGTCATTTTTAATGCTCTTTATTGATGAAAATGTAAGCATCCATTTAAATCTTTTAATCTTTCTTTCCAGACTATGAATTAGCGATCTTTCTTGTAATCTACCTTTTTGTGATTGAGAGTTTTTTTTACTCCTTTTTTTTCATTTCATTCGTCAATAAAATTCATCATGTTTCCTTCTAAAAAAATCAACCCAACCAACCATGGGATCACAAAAGGTTTCCAAATTGAAATTAATAGACAAAAAATTATAATCAATTAAGATCGAATTTGTATAAGCATCTCCATTTCAAATTAGTGATCATCTCTCCAATCTCCTCCCCCTTTCTCTGGAATTGTTTTGAAAGAGTGTGGTGGATTGATAGAAAGGTTTTGATTATGATATTTATATTTTATTCCTAACTATTTGTAGGTGGATGCTATAACAACAGAAAATAATAAAGAAGCGGGGGGAAGGGTTGTGGGGTCAGTTTTGAACCAGGTTTGATGAAGTGCAATATGATATGATTTGATTGTACTTAGGCTGCTGCTTCTTATTTTCCTCAATCTCTGCTTATTTCTGCAGTTACTTATAGAGTTAGATGGAATAGAACAACGACGAGGTGTCTATGTTATTGGTGCTACAAATAGGTAATGAACGTCGATTCTTTTGAAGTATCTGTATGTTCTCATGATCATCAACAGTGATGCTGATCTTCTTTACAAGTTTATTTATAGACTCGAAGCCATCGACCGTTGGATAGATTTGGCAACATTCTTTTTGTTCCTGCACCTGGTCCAAATGAGCGAGGACTGGTCTTAAAAGCTCTTGCAAGAAAGATGTCTGTTGATGCCAGTGTAGATCTACAGGCTGTTGGGAAAAATGGAGGAATGCAAATATTTTAATGGGGCTGATCTTGCCAATGCGGTTTGTGTTTTTCTCGATTGAATTTATGATATCTATATTAAATGGTTAATCTAGGAAGCTCAGATACTAATACAACATGGATATGGTGACATGTCATTTTTTAAAAAATCTAGGACACTGCCACAGTAAGGACACATTTACTAAAATGTATATTTTTTAAAATGTGTATTGTTTGCATACCAAAAGGAAATTAAGTCAATAATTAAGTTTATGCATTTATATATTTAAAATATTGGTTTAATGTATTCCGTCCTCAAAATTATTATTTTTGTCATATACTTTTATTTGTCTTGTACTTAACAAGTTTTCGAAACAAATGTTGGATCTATATTGACTTTGTACAACTAACGCTTGACACATCTATTGTGATAACAAATGTTGGAGTGCCGGTGCTTCTTAGTGGTTAACAGTTATTCATCGTTTCTTTTCGTTTCATTTGGGGGAAGGGTTAAAACTAAAAGTAATGGTGAAGTCGAGATTCATGTGATTTTTCTCATGACAATTGACAGTTGAGAAAAGCTTCAATGCTTGCTTTGGAAGAGAAATATCCATCAGGCGGCAGCAACTTAAACTCAAACTCAACACCATGTACCATTAAGATGCCCCATATTGAGCGTGCGGTGGCTGAGATTTCCCCATCTGTGAGACAAAAAGGGTATTTTTATTCACATTTCTCTTCATATTCAAAGCCAAAATATGGTCAAACTATCAGTTTCTAACACTTTTTTTCTCCCTCTTTGTTGAGGATCCCACATTGAAAAGATTGGTGGAGACCTCACAATATATAAGCTACAAGGGCTACTCCACTCATTACCATCTTGAGGGGACATGTTGAGGAAACTGTTATTTTATTCTTATGGTTTAAAGAATGTAATCAGGTTTTATGAATGTTATTGAATCTTTTTGGTTGAAGCACACCGTCAACATTTTAACGGTGGTGTGTAAGGAGATGCATAGAATGAAGCCAAATATTGTTGGGAAAAAAATGCATAATTTTATTGTAAGTAGTGTTTTTTTTTTTTTTTTTTTTTTGACCTATTTGAACAAGTGAGTTTTATTTGAGTTTAACATTTCAAATCTTTGAAATAATTTAAAAACAACAAAAGAAACACTTTGAATTATAAGCCAAATTTAAAACATAAAAACATGGTTTAAGGACCATTTAAAAAAAAAAAAACAATACGGAAGCACTTTACTTAAAAACACTTTTTTCAAAGTCATCCCAAACTCACTATCAAATGCTTATACCAAAAATGTTTTACATAAAAATACTTTTTTCAAAAGTCATTCCAAAATCACTATGAGACCACCATCGGTCGATTTTGTCCGAGTAGAATGAAAGAAAGTAGACTCCATGTGACATTATGTAAGGCAATCCCTATTCCTTTCCCATCCACACCTATGATTTGAAAGAAACACATTGAATTTCCCACAAATTCAGCCTAAAAATCCAATAAATGAAAGGGAAAGCAAGGCACTTGTTGACATCACAAAGCATTGCAAATTGGGTGGAAGAGACAAAAGAGAAAGAGCATTATGAGCAACAAAATATGGAAAAAGTGAAGCGTATGGGCTTTCATCTCTTAAATTCAATGCAAATAAATTATTCCACCTTTCTCACTCTTCATTCTACTATTCTTTCTTTGAATTCCTAATTTAGCTTTTTTTTTTCCCTTTTTTTCATCTTGTTCCTCTCCTAAATTTGGTATGAAGATCATTAAATTGCTAAAGATGGGTTTTGATTCTCTATTCTATTCTTAATTCTCTTGGTTTTGATGTGTTTTTAGAACTTCTTTTTGGGGTAGTGTTGGATTCTTCCTTCTGGTATGA ATGAACCTTGTAGAAGAGAATCATGTAGAAGATTTGTGGAAACAAACTTGGTTGCCTGAGGATTTGGAAAAGTTGGCTATAACCAAGGTTGATTTTGAGGTGGATGCTATAACAACAGAAAATAATAAAGAAGCGGGGGGAAGGGTTGTGGGGTCAGTTTTGAACCAGTTACTTATAGAGTTAGATGGAATAGAACAACGACGAGGTGTCTATGTTATTGGTGCTACAAATAGGCTGTTGGGAAAAATGGAGGAATGCAAATATTTTAATGGGGCTGATCTTGCCAATGCGTTGAGAAAAGCTTCAATGCTTGCTTTGGAAGAGAAATATCCATCAGGCGGCAGCAACTTAAACTCAAACTCAACACCATGTACCATTAAGATGCCCCATATTGAGCGTGCGGTGGCTGAGATTTCCCCATCTGTGAGACAAAAAGGAACTTCTTTTTGGGGTAGTGTTGGATTCTTCCTTCTGGTATGA ATGAACCTTGTAGAAGAGAATCATGTAGAAGATTTGTGGAAACAAACTTGGTTGCCTGAGGATTTGGAAAAGTTGGCTATAACCAAGGTTGATTTTGAGGTGGATGCTATAACAACAGAAAATAATAAAGAAGCGGGGGGAAGGGTTGTGGGGTCAGTTTTGAACCAGTTACTTATAGAGTTAGATGGAATAGAACAACGACGAGGTGTCTATGTTATTGGTGCTACAAATAGGCTGTTGGGAAAAATGGAGGAATGCAAATATTTTAATGGGGCTGATCTTGCCAATGCGTTGAGAAAAGCTTCAATGCTTGCTTTGGAAGAGAAATATCCATCAGGCGGCAGCAACTTAAACTCAAACTCAACACCATGTACCATTAAGATGCCCCATATTGAGCGTGCGGTGGCTGAGATTTCCCCATCTGTGAGACAAAAAGGAACTTCTTTTTGGGGTAGTGTTGGATTCTTCCTTCTGGTATGA MNLVEENHVEDLWKQTWLPEDLEKLAITKVDFEVDAITTENNKEAGGRVVGSVLNQLLIELDGIEQRRGVYVIGATNRLLGKMEECKYFNGADLANALRKASMLALEEKYPSGGSNLNSNSTPCTIKMPHIERAVAEISPSVRQKGTSFWGSVGFFLLV Homology
BLAST of Lag0029646 vs. NCBI nr
Match: KAG6595581.1 (Cell division control protein 48-like C, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 118.2 bits (295), Expect = 6.3e-23 Identity = 88/270 (32.59%), Postives = 112/270 (41.48%), Query Frame = 0
BLAST of Lag0029646 vs. NCBI nr
Match: XP_022152355.1 (cell division control protein 48 homolog C [Momordica charantia]) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-22 Identity = 72/166 (43.37%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of Lag0029646 vs. NCBI nr
Match: KAG6603180.1 (Cell division control protein 48-like C, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-21 Identity = 89/283 (31.45%), Postives = 112/283 (39.58%), Query Frame = 0
BLAST of Lag0029646 vs. NCBI nr
Match: XP_008447436.1 (PREDICTED: cell division control protein 48 homolog C-like [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 5.9e-21 Identity = 72/166 (43.37%), Postives = 88/166 (53.01%), Query Frame = 0
BLAST of Lag0029646 vs. NCBI nr
Match: XP_008457923.1 (PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis melo] >XP_016902175.1 PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis melo] >XP_016902176.1 PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis melo]) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20 Identity = 71/166 (42.77%), Postives = 87/166 (52.41%), Query Frame = 0
BLAST of Lag0029646 vs. ExPASy Swiss-Prot
Match: Q9SS94 (Cell division control protein 48 homolog C OS=Arabidopsis thaliana OX=3702 GN=CDC48C PE=2 SV=2) HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12 Identity = 58/162 (35.80%), Postives = 79/162 (48.77%), Query Frame = 0
BLAST of Lag0029646 vs. ExPASy Swiss-Prot
Match: O14325 (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.1e-05 Identity = 49/170 (28.82%), Postives = 64/170 (37.65%), Query Frame = 0
BLAST of Lag0029646 vs. ExPASy Swiss-Prot
Match: Q9LZF6 (Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CDC48E PE=2 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04 Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of Lag0029646 vs. ExPASy Swiss-Prot
Match: Q07844 (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RIX7 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04 Identity = 38/131 (29.01%), Postives = 55/131 (41.98%), Query Frame = 0
BLAST of Lag0029646 vs. ExPASy Swiss-Prot
Match: Q9NAG4 (Protein mac-1 OS=Caenorhabditis elegans OX=6239 GN=mac-1 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04 Identity = 42/165 (25.45%), Postives = 70/165 (42.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|