Lag0029635 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029635
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	type 1 phosphatases regulator ypi1
Location	chr8: 40757934 .. 40758281 (+)
RNA-Seq Expression	Lag0029635
Synteny	Lag0029635

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGGCACCGATGACCGCCGCCGGAGCATTGACGTCCTCCTCTCCTTCCCTCACCACCACCGTCGTCTTGGCCAATGGATCATCTTCCTCCCATCCCCCTGAAACCCTAGTTCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGCACCGTCGACAACGAGTTCATGCAGAAGAAGAGCTCCAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGACAGCGATCAGGAGGATGACCATGGTGATAATCACCACCATGGGAATGGAAGCCCTTGCTGCTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

mRNA sequence

ATGGCTAGGGCACCGATGACCGCCGCCGGAGCATTGACGTCCTCCTCTCCTTCCCTCACCACCACCGTCGTCTTGGCCAATGGATCATCTTCCTCCCATCCCCCTGAAACCCTAGTTCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGCACCGTCGACAACGAGTTCATGCAGAAGAAGAGCTCCAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGACAGCGATCAGGAGGATGACCATGGTGATAATCACCACCATGGGAATGGAAGCCCTTGCTGCTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

Coding sequence (CDS)

ATGGCTAGGGCACCGATGACCGCCGCCGGAGCATTGACGTCCTCCTCTCCTTCCCTCACCACCACCGTCGTCTTGGCCAATGGATCATCTTCCTCCCATCCCCCTGAAACCCTAGTTCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGCACCGTCGACAACGAGTTCATGCAGAAGAAGAGCTCCAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGACAGCGATCAGGAGGATGACCATGGTGATAATCACCACCATGGGAATGGAAGCCCTTGCTGCTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

Protein sequence

MARAPMTAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEFMQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS

Homology

[Close]

BLAST of Lag0029635 vs. NCBI nr
Match: KAG7032904.1 (YPI2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARAPMTAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEF 60
           MARAP TAAGALTSSSPSLTTTVV ANGSSSS PPETLVLRLNRKKKKVSWKEGTVDNEF
Sbjct: 1   MARAPTTAAGALTSSSPSLTTTVVFANGSSSSQPPETLVLRLNRKKKKVSWKEGTVDNEF 60

Query: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS 116
           MQKKSSKKCCIFHKQKPFDEDDSDQEDDHG NHHHGN SPCCSRGNGGD+SSRVS
Sbjct: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGHNHHHGNESPCCSRGNGGDSSSRVS 115

[Close]

BLAST of Lag0029635 vs. NCBI nr
Match: XP_023518837.1 (protein phosphatase 1 regulatory subunit INH3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023518845.1 protein phosphatase 1 regulatory subunit INH3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 111/117 (94.87%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MARAPMTAAGALTSSSPSLTTTVVLANGSSSSH--PPETLVLRLNRKKKKVSWKEGTVDN 60
           MARAP TAAGALTSSSPSLTTTVVLANGSSSSH  PPETLVLRLNRKKKKVSWKEGTVDN
Sbjct: 1   MARAPTTAAGALTSSSPSLTTTVVLANGSSSSHSQPPETLVLRLNRKKKKVSWKEGTVDN 60

Query: 61  EFMQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS 116
           EFMQKKSSKKCCIFHKQKPFDEDDSDQEDDHG NHHHGN SPCCSRGNGGD+SSRVS
Sbjct: 61  EFMQKKSSKKCCIFHKQKPFDEDDSDQEDDHGHNHHHGNESPCCSRGNGGDSSSRVS 117

[Close]

BLAST of Lag0029635 vs. NCBI nr
Match: XP_022990493.1 (protein phosphatase 1 regulatory subunit INH3-like [Cucurbita maxima])

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARAPMTAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEF 60
           MARAP TA GALTSSSPSLTTTVVLANGSSSS PPETLVLRLNRKKKKVSWKEGTVDNEF
Sbjct: 1   MARAPTTAPGALTSSSPSLTTTVVLANGSSSSQPPETLVLRLNRKKKKVSWKEGTVDNEF 60

Query: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS 116
           MQKKSSKKCCIFHKQKPFDEDDSDQEDDHG NHHHGN SPCCSRGNGGD+SSRVS
Sbjct: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGHNHHHGNESPCCSRGNGGDSSSRVS 115

[Close]

BLAST of Lag0029635 vs. NCBI nr
Match: XP_022957973.1 (protein phosphatase 1 regulatory subunit INH3-like [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARAPMTAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEF 60
           MAR P TAAGALTSSSPSLTTTVVLANGSSSS PPETLVLRLNRKKKKVSWKEGTVDNEF
Sbjct: 1   MARLPTTAAGALTSSSPSLTTTVVLANGSSSSQPPETLVLRLNRKKKKVSWKEGTVDNEF 60

Query: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS 116
           MQKKSSKKCCIFHKQKPFDEDDSDQEDDHG NHHHGN SPCCSRGNGGD+SSRVS
Sbjct: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGHNHHHGNESPCCSRGNGGDSSSRVS 115

[Close]

BLAST of Lag0029635 vs. NCBI nr
Match: KAG6602224.1 (Protein phosphatase 1 regulatory subunit INH3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 107/113 (94.69%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MARAPMTAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEF 60
           MARAP TAAGALTSSSPSLTTTVV ANGSSSS PPETLVLRLNRKKKKVSWKEGTVDNEF
Sbjct: 1   MARAPTTAAGALTSSSPSLTTTVVFANGSSSSQPPETLVLRLNRKKKKVSWKEGTVDNEF 60

Query: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSR 114
           MQKKSSKKCCIFHKQKPFDEDDSDQEDDHG NHHHGN SPCCSRGNGGD+SSR
Sbjct: 61  MQKKSSKKCCIFHKQKPFDEDDSDQEDDHGHNHHHGNESPCCSRGNGGDSSSR 113

[Close]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot
Match: Q8S8F7 (Protein phosphatase 1 regulatory subunit INH3 OS=Arabidopsis thaliana OX=3702 GN=INH3 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 67/101 (66.34%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 13  TSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEFMQKKSSKKCCIF 72
           T  S S TT+V+L N  S S P E LVLRLNRKKKKVSWK+GTVDNEFMQKKSSKKCCIF
Sbjct: 5   TRPSSSATTSVILENPVSQSQPTERLVLRLNRKKKKVSWKDGTVDNEFMQKKSSKKCCIF 64

Query: 73  HKQKPFDEDDSDQEDD---HGDNHHHGNGSPCCSRGNGGDA 111
           HKQKPFDEDDS++EDD   H D++H  + S   S  N   A
Sbjct: 65  HKQKPFDEDDSEEEDDNNHHCDHNHEHSESGEASSSNDSKA 105

[Close]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot
Match: O14218 (Type 1 phosphatases regulator ypi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ypi1 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-08
Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 16  SPSLTTTVVLANGSSS-SHPPETLVLRLNRKK-KKVSWKEGTVDNEFMQKKSSKKCCIFH 75
           S S T T+     S+S SH     VL L  +  ++V W   TVDNE M KK SK CCIFH
Sbjct: 11  SSSATVTIESTEESASISHEESENVLHLQPEPVRRVRWTVSTVDNEHMNKKKSKVCCIFH 70

Query: 76  KQKPFDEDDSDQEDDHGDNHHHGNGSPCCSR 105
           KQ+ FDE  SD + D   +    + S CCSR
Sbjct: 71  KQRKFDESSSDSDSDSDSD---SSCSSCCSR 98

[Close]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot
Match: Q6DDH0 (E3 ubiquitin-protein ligase PPP1R11 OS=Xenopus laevis OX=8355 GN=ppp1r11 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07
Identity = 37/82 (45.12%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 7  TAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEFMQKKSS 66
          TAAG  TSS      TV   + +   H   TL LR  +  KKV W   TVDNE + ++SS
Sbjct: 8  TAAGGSTSS------TVTTESETQPEHRSLTLKLRKRKPDKKVEWTCDTVDNENLGRRSS 67

Query: 67 KKCCIFHKQKPFDEDDSDQEDD 89
          K CCI+ K +PF E  S+ EDD
Sbjct: 68 KCCCIYEKPRPFGESSSESEDD 83

[Close]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot
Match: Q6GLB0 (E3 ubiquitin-protein ligase PPP1R11 OS=Xenopus tropicalis OX=8364 GN=ppp1r11 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-07
Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 7  TAAGALTSSSPSLTTTVVLANGSSSSHPPETLVLRLNRKKKKVSWKEGTVDNEFMQKKSS 66
          TA G  TSS      TV   + +   H   TL LR  +  KKV W   TVDNE + ++SS
Sbjct: 8  TAGGGATSS------TVTTESDTQPEHRSLTLKLRKRKPDKKVEWTCDTVDNENLGRRSS 67

Query: 67 KKCCIFHKQKPFDEDDSDQEDD 89
          K CCI+ K +PF E  S+ ED+
Sbjct: 68 KCCCIYEKPRPFGESSSESEDE 83

[Close]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot
Match: Q59ZU1 (Type 1 phosphatases regulator YPI2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=YPI2 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-07
Identity = 38/95 (40.00%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 29  SSSSHPP------ETLVLRLNRKKK--KVSWKEGTVDNEFMQKKSSKKCCIFHKQKPFDE 88
           SS+  PP      ET   +  +KKK  KV W EGTVDNE M KK +K CCIFH Q+ FDE
Sbjct: 28  SSNQQPPQQEQQQETTSTKKKKKKKAPKVRWTEGTVDNEHMNKKKTKICCIFHPQRSFDE 87

Query: 89  DDSDQEDDHGDNHHHGNGSPCCSRGNGGDASSRVS 116
           +  D + +H  +    +     + G+  +  SR S
Sbjct: 88  EVEDDKHNHSCSSSDESSDSSDNEGDKDEDESRPS 122

The following BLAST results are available for this feature:

BLAST of Lag0029635 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032904.1	2.6e-50	94.78	YPI2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023518837.1	3.3e-50	94.87	protein phosphatase 1 regulatory subunit INH3-like isoform X1 [Cucurbita pepo su...	[more]
XP_022990493.1	3.3e-50	94.78	protein phosphatase 1 regulatory subunit INH3-like [Cucurbita maxima]	[more]
XP_022957973.1	3.3e-50	94.78	protein phosphatase 1 regulatory subunit INH3-like [Cucurbita moschata]	[more]
KAG6602224.1	2.2e-49	94.69	Protein phosphatase 1 regulatory subunit INH3, partial [Cucurbita argyrosperma s...	[more]

BLAST of Lag0029635 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F7	6.6e-25	66.34	Protein phosphatase 1 regulatory subunit INH3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O14218	7.3e-08	45.05	Type 1 phosphatases regulator ypi1 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]
Q6DDH0	1.6e-07	45.12	E3 ubiquitin-protein ligase PPP1R11 OS=Xenopus laevis OX=8355 GN=ppp1r11 PE=3 SV...	[more]
Q6GLB0	8.1e-07	42.68	E3 ubiquitin-protein ligase PPP1R11 OS=Xenopus tropicalis OX=8364 GN=ppp1r11 PE=...	[more]
Q59ZU1	8.1e-07	40.00	Type 1 phosphatases regulator YPI2 OS=Candida albicans (strain SC5314 / ATCC MYA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011107	Type 1 protein phosphatase inhibitor	PFAM	PF07491	PPI_Ypi1	coord: 43..88 e-value: 1.5E-19 score: 69.6
IPR011107	Type 1 protein phosphatase inhibitor	PANTHER	PTHR20835	E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED	coord: 14..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..115
None	No IPR available	PANTHER	PTHR20835:SF7	BNAA05G11440D PROTEIN	coord: 14..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029635.1	Lag0029635.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032515	negative regulation of phosphoprotein phosphatase activity
molecular_function	GO:0004865	protein serine/threonine phosphatase inhibitor activity