Lag0029627 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029627
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Receptor-like serine/threonine-protein kinase
Location	chr8: 40701251 .. 40701730 (-)
RNA-Seq Expression	Lag0029627
Synteny	Lag0029627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTTTTAGAGATCGTGAGTGGACGAAGGAATTTTGATGTTTCTGCAGAAACAAATAACAAGAGGTTCTCCATGTGGGCTTATGAAGAGTTTGAGAAGGGAAATCTCGTGGAAATTGTTGACAAAAGGCTGATGGATCAAGAGATTGATATGGAACAAGTGAGCAAGGTTCTTCAGGTGAGCTTTTGGTGCATCCAGGAGCAACCATCTCAGAGGCCAATGATGGGCAAAGTGGTGCACATGATTGAAGGAGTCATCGACATCGAGAGGCCTCCTGCGCCAAAAGTAACATCCATGGTGTCTGCAAGTGGAACAAGCACTTATCACAGCAGCAATTTGAGTAATTTCTCCACCACAGCAGACTCAGCCGCTACATCGGCCTCATTTTCGTTCTCTCTTGCTGCAGCAGACTGGACTTCTAGTGGCAGGAATCTTGAGAAAACAACTTCATCCCTTCTGCAATCAAGGTACGACTAA

mRNA sequence

ATGGTTCTTTTAGAGATCGTGAGTGGACGAAGGAATTTTGATGTTTCTGCAGAAACAAATAACAAGAGGTTCTCCATGTGGGCTTATGAAGAGTTTGAGAAGGGAAATCTCGTGGAAATTGTTGACAAAAGGCTGATGGATCAAGAGATTGATATGGAACAAGTGAGCAAGGTTCTTCAGGTGAGCTTTTGGTGCATCCAGGAGCAACCATCTCAGAGGCCAATGATGGGCAAAGTGGTGCACATGATTGAAGGAGTCATCGACATCGAGAGGCCTCCTGCGCCAAAAGTAACATCCATGGTGTCTGCAAGTGGAACAAGCACTTATCACAGCAGCAATTTGAGTAATTTCTCCACCACAGCAGACTCAGCCGCTACATCGGCCTCATTTTCGTTCTCTCTTGCTGCAGCAGACTGGACTTCTAGTGGCAGGAATCTTGAGAAAACAACTTCATCCCTTCTGCAATCAAGGTACGACTAA

Coding sequence (CDS)

ATGGTTCTTTTAGAGATCGTGAGTGGACGAAGGAATTTTGATGTTTCTGCAGAAACAAATAACAAGAGGTTCTCCATGTGGGCTTATGAAGAGTTTGAGAAGGGAAATCTCGTGGAAATTGTTGACAAAAGGCTGATGGATCAAGAGATTGATATGGAACAAGTGAGCAAGGTTCTTCAGGTGAGCTTTTGGTGCATCCAGGAGCAACCATCTCAGAGGCCAATGATGGGCAAAGTGGTGCACATGATTGAAGGAGTCATCGACATCGAGAGGCCTCCTGCGCCAAAAGTAACATCCATGGTGTCTGCAAGTGGAACAAGCACTTATCACAGCAGCAATTTGAGTAATTTCTCCACCACAGCAGACTCAGCCGCTACATCGGCCTCATTTTCGTTCTCTCTTGCTGCAGCAGACTGGACTTCTAGTGGCAGGAATCTTGAGAAAACAACTTCATCCCTTCTGCAATCAAGGTACGACTAA

Protein sequence

MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQVSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFSTTADSAATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD

Homology

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BLAST of Lag0029627 vs. NCBI nr
Match: XP_022133877.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia])

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-66
Identity = 141/162 (87.04%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLEIVSGRRNF+VSAETN+KRFS+WAYEEFEKGN++EIVDKRLMDQEIDMEQVS+V+Q
Sbjct: 694 MVLLEIVSGRRNFEVSAETNHKRFSLWAYEEFEKGNVMEIVDKRLMDQEIDMEQVSRVVQ 753

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFSTT 120
           VSFWCIQEQPSQRPMMGKVV MIEGV+D+ERPPAPKVTSMVSASGTSTY SSN+SNFSTT
Sbjct: 754 VSFWCIQEQPSQRPMMGKVVQMIEGVVDVERPPAPKVTSMVSASGTSTYVSSNVSNFSTT 813

Query: 121 ADSA---ATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD 160
           ADS    AT ASFS SLAAAD TS GRNLEKTTSSLL+SRYD
Sbjct: 814 ADSTATPATPASFSSSLAAADLTSGGRNLEKTTSSLLESRYD 855

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BLAST of Lag0029627 vs. NCBI nr
Match: XP_022133876.1 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 136/159 (85.53%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLEIVSGRRNF+VSAETNNKRFS+WAYEEFEKGN++EIVDKRLMDQEIDMEQVS+V+Q
Sbjct: 682 MVLLEIVSGRRNFEVSAETNNKRFSLWAYEEFEKGNVMEIVDKRLMDQEIDMEQVSRVVQ 741

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFSTT 120
           VSFWCIQEQPS RPMMGKVV MIEGV+D+ERPP PKVTSMVSASGTSTY SSN+SNFST 
Sbjct: 742 VSFWCIQEQPSHRPMMGKVVQMIEGVVDVERPPTPKVTSMVSASGTSTYVSSNVSNFSTL 801

Query: 121 ADSAATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD 160
           ADS AT  SFS SLAAAD T  GRNLEKT+SSLL SRYD
Sbjct: 802 ADSTATPTSFSLSLAAADSTYVGRNLEKTSSSLLHSRYD 840

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BLAST of Lag0029627 vs. NCBI nr
Match: XP_038885055.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 3.3e-64
Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLEIVSGRRNFDVSAETN+KRFS+WAYEEFEKGNL+EIVDKRL+DQEIDMEQV++VLQ
Sbjct: 694 MVLLEIVSGRRNFDVSAETNHKRFSLWAYEEFEKGNLIEIVDKRLVDQEIDMEQVNRVLQ 753

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFST- 120
           VSFWCIQEQPSQRPMMGKVV MIEGVIDIERPPAPKVTSMVSA+GTSTY SSNLSNFST 
Sbjct: 754 VSFWCIQEQPSQRPMMGKVVQMIEGVIDIERPPAPKVTSMVSATGTSTYISSNLSNFSTT 813

Query: 121 -TADSAATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD 160
            TA++ AT ASFS SLAA D+T  G N EKT+SSLLQSRYD
Sbjct: 814 PTAETPATPASFSSSLAAVDFTPGGSNSEKTSSSLLQSRYD 854

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BLAST of Lag0029627 vs. NCBI nr
Match: XP_008456685.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucumis melo] >KAA0031670.1 G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK04441.1 G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 133/159 (83.65%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLEIVSGRRNFDVS ETN+KRFS+WAYEEFEKGNL+EIVDKRL+DQEIDM+QVS+V+Q
Sbjct: 685 MVLLEIVSGRRNFDVSEETNHKRFSLWAYEEFEKGNLIEIVDKRLVDQEIDMDQVSRVVQ 744

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFSTT 120
           VSFWCIQEQPSQRP MGKVV MIEGVIDIERPPAPKVTSMVSASGTSTY SSNLSNFSTT
Sbjct: 745 VSFWCIQEQPSQRPTMGKVVQMIEGVIDIERPPAPKVTSMVSASGTSTYISSNLSNFSTT 804

Query: 121 ADSAATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD 160
             +  T ASFS SLAA D T  G  +EKT+SSLLQSRYD
Sbjct: 805 -PTTETPASFSSSLAALDMTPGGSKIEKTSSSLLQSRYD 842

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BLAST of Lag0029627 vs. NCBI nr
Match: XP_023550420.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 134/159 (84.28%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLEIVSGRRNFDV+AETN+KRFS+WAYEEFEKGNL EIVDKRL+DQEIDMEQVS+V+Q
Sbjct: 687 MVLLEIVSGRRNFDVTAETNHKRFSLWAYEEFEKGNLREIVDKRLVDQEIDMEQVSRVVQ 746

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFSTT 120
           VSFWCIQEQPSQRP MGKVV MIEGVIDIERPPAPKVTSMVSASGTSTY SSN+SNFS T
Sbjct: 747 VSFWCIQEQPSQRPTMGKVVQMIEGVIDIERPPAPKVTSMVSASGTSTYISSNISNFS-T 806

Query: 121 ADSAATSASFSFSLAAADWTSSGRNLEKTTSSLLQSRYD 160
           A++ AT ASFS SLAAAD T  G   EKT+SSLL SRYD
Sbjct: 807 AETPATPASFSSSLAAADLTPGGSICEKTSSSLLHSRYD 844

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BLAST of Lag0029627 vs. ExPASy Swiss-Prot
Match: Q9XID3 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32
Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLM-DQEIDMEQVSKVL 60
           MVLLE+VSG+RNFDVS +TN+K+FS+WAYEEFEKGN   I+D RL  DQ +DMEQV +++
Sbjct: 673 MVLLELVSGKRNFDVSEKTNHKKFSIWAYEEFEKGNTKAILDTRLSEDQTVDMEQVMRMV 732

Query: 61  QVSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNFST 120
           + SFWCIQEQP QRP MGKVV M+EG+ +I+ P  PK  S VS SG S   +S+ S F  
Sbjct: 733 KTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCPKTISEVSFSGNS-MSTSHASMFVA 792

Query: 121 TADSAATSASFSFSLAAADWTSSG 144
           +  + ++S S + S      TSSG
Sbjct: 793 SGPTRSSSFSATRSFQTMGITSSG 815

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BLAST of Lag0029627 vs. ExPASy Swiss-Prot
Match: Q9FLV4 (G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana OX=3702 GN=At5g24080 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.5e-15
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           M+LLEIV GRRN D+S +  +  +  WAY+E   G  ++ VDKRL     + E+V K L+
Sbjct: 720 MLLLEIVGGRRNLDMSYDAEDFFYPGWAYKELTNGTSLKAVDKRLQG-VAEEEEVVKALK 779

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVID-IERPPAPKVTSMVSASGTSTYHSSNLSNF-- 120
           V+FWCIQ++ S RP MG+VV ++EG  D I  PP P+    +   G    + +    F  
Sbjct: 780 VAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPPMPQTILELIEEGLEDVYRAMRREFNN 839

Query: 121 ---STTADSAATSASFSFS 134
              S T ++  TS S+  S
Sbjct: 840 QLSSLTVNTITTSQSYRSS 857

[Close]

BLAST of Lag0029627 vs. ExPASy Swiss-Prot
Match: Q8RWZ5 (G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.6e-15
Identity = 47/131 (35.88%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEKGNLVEIVDKRLMDQEIDMEQVSKVLQ 60
           MVLLE++ GR+N+D S  +    F  +A+++ E+G L++IVD ++ + ++  E+V + ++
Sbjct: 682 MVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMK 741

Query: 61  VSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPKVTSMVSASGTSTYHSSNLSNF--S 120
            + WCIQE    RP M KVV M+EGV  + +PP+           +ST  S   S+F  S
Sbjct: 742 TALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPS-----------SSTMGSRLYSSFFKS 801

Query: 121 TTADSAATSAS 130
            + D  AT++S
Sbjct: 802 ISEDGGATTSS 801

[Close]

BLAST of Lag0029627 vs. ExPASy Swiss-Prot
Match: Q39203 (G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana OX=3702 GN=SD22 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKR--------FSMWAYEEFEKGNLVEIVDKRLMDQEIDM 60
           M LLE++ GRRN  V+++T  ++        F  WA  E  +GN+  +VD RL + E + 
Sbjct: 649 MTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRL-NGEYNT 708

Query: 61  EQVSKVLQVSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPK-VTSMVS------ASG 120
           E+V+++  V+ WCIQ+    RP MG VV M+EGV+++  PP PK + ++VS       SG
Sbjct: 709 EEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVVEVTVPPPPKLIQALVSGDSYRGVSG 768

Query: 121 TSTYHSSNLSNFSTTADSAATSASF 131
           TS       S+ +T   S  + +SF
Sbjct: 769 TSCSEGHGCSDLNTGLSSPGSRSSF 792

[Close]

BLAST of Lag0029627 vs. ExPASy Swiss-Prot
Match: O64477 (G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.2e-14
Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 1   MVLLEIVSGRRNFDVSAETNNKRFSMWAYEEFEK-GNLVEIVDKRLMDQEIDMEQVSKVL 60
           M+L E+VSGRRN + S     + F  WA     K G++  +VD RL    +D+E+V++  
Sbjct: 683 MMLFELVSGRRNTEQSENEKVRFFPSWAATILTKDGDIRSLVDPRLEGDAVDIEEVTRAC 742

Query: 61  QVSFWCIQEQPSQRPMMGKVVHMIEGVIDIERPPAPK-----------VTSMVSASGTST 120
           +V+ WCIQ++ S RP M +VV ++EGV+++  PP P+           V     +S +S+
Sbjct: 743 KVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFPRSIQALVVSDEDVVFFTESSSSSS 802

Query: 121 YHSSNLSNFSTTADSA 125
           ++SS     S+++ S+
Sbjct: 803 HNSSQNHKHSSSSSSS 818

The following BLAST results are available for this feature:

BLAST of Lag0029627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133877.1	2.1e-66	87.04	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordi...	[more]
XP_022133876.1	6.6e-65	85.53	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kina...	[more]
XP_038885055.1	3.3e-64	85.71	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Beninca...	[more]
XP_008456685.1	2.6e-61	83.65	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g343...	[more]
XP_023550420.1	7.6e-61	84.28	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi...	[more]

BLAST of Lag0029627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XID3	2.6e-32	55.56	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabi...	[more]
Q9FLV4	6.5e-15	38.85	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabi...	[more]
Q8RWZ5	8.6e-15	35.88	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidops...	[more]
Q39203	1.5e-14	36.55	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidops...	[more]
O64477	7.2e-14	33.82	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabi...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 1..104 e-value: 9.6E-14 score: 53.2
None	No IPR available	PANTHER	PTHR47974:SF2	G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE	coord: 1..142
None	No IPR available	PANTHER	PTHR47974	OS07G0415500 PROTEIN	coord: 1..142
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029627.1	Lag0029627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0048544	recognition of pollen
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity