Lag0029615 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029615
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	WD repeat protein
Location	chr8: 40580342 .. 40591141 (-)
RNA-Seq Expression	Lag0029615
Synteny	Lag0029615

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATCCAGAGAGCGAGAGCGAAATCCGAGAAATTGAAGAAACAGGCTCGAACTCGGAGCTGCAACCTCTTCTTCAAAGCCAGAATCCGAGTTCGAACTCCAAAACCGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGATCAAGACCAGCTCGAGGTCCGGGAGATTCTCGACAATTACGGCTTCAAATCCGTATTCGCCTTTAAACCTGACTCCGGTCGTGGCGTTCCGATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTCCATTGACGGAGAGCCCAAGGTAAAGGTTCACTGCTCTATTCACTTCGAATTGCAAAATTGATCCATCTTGGGTCCCAGTAACTGGCAATGGAAACTATATACATTTTTGTAATTGTTTGAAATTTATTTTGTTGCGTGGGTGGGTGGGTGAGTGTCATTCTGCCGTGTCTAGAGATATATAAATGCACTCAAGTTTTGTTTAATTTGGTTTGGAGTTGAGGTTTTAGGAATTGAAGGTCTTATGGATGAGAATCATGAGATACAATACACAACATATTTTCTTGAATCCTGTAATTGATGATATGTGGGTGTAAGTTTAGTCAATCGTTCTCTAAGCCCATCTTACATCTGGGTTTTGACTCAAAGTAGACTTGAAATGAACTGTGAAGGCTGATTGAGATTTGGCAATGTAGTTCTGAAGAATACCAAACGATGCAATGCGAGTAAAAGTTATAGATCCATTTGGAAATATAGCTTCTTACTTCTCGCACAAGGTTGTTTCTAGTAAGTATGGACTTCACTCCAATATTTGGATTCCAATGAGGTTGCTAATAGCATAAACCCCTCAAAATAGCTTCAATGTTTGCCCAGTTGATCATTTTTTTTAAAAAAAATTATTTATATATTCATAAGGGCAGCAGAGGATGTGAACCAGTTGTGCTTAGGCTATCATGCTGCCTTATTTACCAGGGCAGCAGAGGATGTGAACCATATTCTTTAGATGAGTATGTTTGTGGAGAAAAATTTTCAAATATTCTTGGTGATGTTGGCTCCCTCTTAGAGTTGCCATGGTATGATGGAGGAAATTGTCCTACATTTGCTGTTTTATGACAAATGTCATCTTCTTGGATTCTTGCCATCTGGAACATTTGGGTGTTGATAAATAACAGGACTTTTTAGAGTATCCAAGGTTCTTGGAAAATATTTATGATGTACTTCACTTTAATGCCCCACTATGGATCCATGAGTGAGTTTGGAATGAATTTTGAGTGGAGTACCTTATGAAAAAGGGGAAAAAGTTGCTTCTTCTAGTCTTAAAATAACGTTTTTAGAATTTTTGGTCATGTGGCCAAAATATTACAATATATTAAAAAAAAGATGCTCCTCGTTTAAAACGTTTTTCTCTATTCTAACAGGCAATGCCAAACAAACTCATGGTATGTTTGTCACCATCCTTGTTTTTTGATGACTAGTTTTTGGGGCTCTTCCCTCTATTTCTTTCTTGGTTTATAATTAATCCAGTACCTTGGATGAACTGTTTCTCACACTGTGAGCTGTTTCCTGTCATACAAGTTCAAATTCATTGGTATATTTGACTATTAGTTTTATTTTTCTGATATTTGTGTGTGTTTGGGCAACCACCACGGGTTGGCCCAGTGGTCAATAAAGGCCATATAAATAATAAAGGACTTAGAAATGAGTTCAAATAATGGTGGTCATCTATCTAGGATATAATATGCTATGAATTGTCTTGCCTTGACAACTAATTCTAGTAACGTTACGTAGTTGTCATGTGAGATTCATTGAAGTGCTTGCAAGCTGGCTCAACACTCATGGATACATAAAATGGAAAATTTTGGTACTTGGGCTAGCATATGCTTAAAACTATCTAATATTCTCCATGTTAGTCTTGTGTGACAGTTACTTAGCAGTGTAACATTTGGCATTCGTAAGGTTACACTTGGTATCAATGGATCTCAGTTTTTAAAGATTTCAACTTTCTCCGACAAAAAGACTATTTCATGGATGAGATGAAATTACGAAAAATAAAAGCATCAAGAGTTACGTAAATATTCTCAGTCAAAGGAGTCGCAAAGTACTAATACACTCCAATGGACTCTTTTGCTGTCATTTGGTTTATTTGGCTAGAACGGAACACACAGGTTTTCTTTTGTTTTTGTTTTTTAAGAATTCAAACTAATTCTTATTTTTGATCTTTGCCAATTTGGGGGCTCCTTCTCTTCATCTTTGGTCTATGTTTTTTGGTGCTACCCTTTTTTTACAAAGATGGTTATCCAATCAAAATTTTATTTCTACTTTTGACAACAAAGGTGTCTAGTCATCCTGTCGAGGCTGTGTTTGTCAATTGATTCAGTTGATAATAACCTTATCGTGTTAATTGGAAAATGGATGGTAATTGGCAAATTGATGCACATATGCACTAATTTTGTTTGATGCTGTTTATATCTATTCTTTTGCATCAGATTCAAGCAAATAGCTAACTCATATTTTCTCTCTTTACTGCAGGATTCCCTGATCAAACCAGTAACCAGGATTATTTTTGGTGTGGCAATTATAACCGTTTTGATTACGTTTCTCTCTCGAGGCTCGCAAGGATGGATGAAGAAATTAAATATCAATGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACGCGCTCGAGGAAGAGAACTAGAGACTTGCTGAAAAAGTACGGTTGGTGAATCTCATTCTCTAGTCCTTCCTCTACTTTTTTTTCATCAATCCTCCAATAGAAAATGGAAAGTAATCAATCAATGTGTTGATTATTGTTTCTTGATTTGAAACTTTGGAAATAGGAGATTCGATACTGTATTGTATTAGCTAGGGAAAATGGAACATTCTTGGTCCATTGCTTTCATAAATTCCCTGCCTTGTTTTGTTCTTTGACATGTGTAGATAAAGCAGCTCTGTTTAGGAGACTGAAAAGTCAACATATTTTAAAGGAATATGTTTGACTCATGGTTTTATTCAGGTTGAGTGATAGGTTTTATTGATTTAAGTTATGTAATTTGGAATTATGTACTTTTTTTTTTTTTTTGAAATATGGAATTATGTACCTAATTTGTGATAAGTATTTCCACTTATTGGTTTGGTTTTATATTATGAGGTCAGACAAATCGTTATCATAATTCAAATGTTCTCTAGTTGAATATTTTGTTCTTTTTTTATTTGTGAGAAATATATTTCTTAACTTAATTTTGACTGATTTTTAATTAGGTCATTGATTTAATCAATATTCTTGGCTTCAAATATTTAAATACTCATATATAAAATTTTAATATTTAAGTAGTTACTTTAATTTCTTTAAGATAAGTTTAAGGTTTTGAACTTTTAAGTGGAATTTCCACTTGAGGAGATGAAAATACAAATAGACAATAAATTAATTTTAACTTTTTCCCACAAGTATAATTTGAATCTCTACTTGTTTAAGATGGCAAATATTTACATTCCTTATATAATAGATTTATTATTATATATTTTATGATCCCTCGAGTTTCAGAATCTGTAGATCGACAACAACTTCTGTTCTGTTAAATTGAGAGTGGAAAAAAAAAAAAAAAGGAAAAACACCGTTTTATAACAAACTTAGTTAAATGGTTATTCTAAAAAAACAATTTCATTTTTTAAAATTTCTAGAATCACTTGAAGCATTTTTAAACTGGTTAAACGCGTTTGTGTGTTCTATAAACCATAATCCATAATATCTCATGATAATTAACAACTACACTAATAAGTAATAACATCATAGAAAGGTATATATATGTGTGTGTGTTTTGAGTAGACAACAACGATGATTTGTATGAATGATACATTTTGGTATCGGTACTTTTACAAATGATCAATTTGGTCTCTTCATTTTTCAAAATGTTCTTGTTTTTCTATCATAATTTTAGCATGAAACTTCACTTAATAAGTTTCTTGAAATGTAGTCATACATTTGATTAAAGAGTCTCCGTTGTATATAAAATTTGTGCTCAAATTTTTACAAATAGGGACTAAATTGACTACTTCTTAGAAGTACGTTGACTAAAATGAATATTGAAAGTACAGAGACCAAAGTGAACACTTAAAAGTATTGAAACCAAAATGAACTTAGGTTGAGAGTACATAGACCAAAATAGTATTTAAGCCTGTATACATATATGAAACTCCAACAACTAATTTAACATTAACCATCATATTATGTAATAATACCTACCTAATTAACTAACCTGTAGGAAAATGGAATAATTTCACACATAATGTAGTGTGGAAAATAAATTCTAAAAGCATGGTAGATTTTAAGGATTTTTTTTTTTTTTTAATTAAAATTGCAAGTTTTAAAACTTATTAGGAAAATAAGAGGTTTTTCAAACTATGTTAAAAAAAAAAAGGTTTTTCAAACTATTTATTTCAATATTGTGGTTTTTATTCCAGCTACGAGACGACCTATCCACGTGTCGCGCACCCAAACCACATTTAAAAAAAAAAAAGAAAAATCTGGTAGCCACAATATTTATATTAAAAAAACGACTCCTCAGTAGGTCGTGTGAAATAAAAACCACAATATTCAAAATAAAAGTTTGAAAAACCTTTTATTTTCCTAATAACTTTTAAAACTTTCAATTTTAATAAAAAAAAAAATCCTAGATTTTAAAGTAAAATAAAAAACAGTTGAATTTAAATTTAAAAAAAGAAACCTTATAAATGACGCATTCTCAATTAGTTAGAAAATATTTTTTTCAGGTAAAAAAGTCGTAAATTTGACCGGCTATCGCGTATCTCTTACGCGCATATCAAGCTCTATAATACATTCCCGCCTCATGTAACGAGTTCAAGAACTCCATTCCATCCGTCTCTTATCGTCTTCAACCTATTAATCTCAGATTTCAGAGAATTATCTTGGCTAGGGTTTGTACGGTTCCTTTTGTGTTTCGATGCAACCTGGTATAATGTGATTTGCAGAATTTGCTCACTGTAGTAACACTTTGTTTCTTCTGCGATGCAAGAAACTTTCGTATGTTTTCTCTCGTCGTTTTCCTGCCTCTTTTATTTGATCATCTCTTGCATCTTCTCTTTACTTATTTTTAGGGTTAATGAACGGAGCGGAATATTTTCAAGATCACAGAGAAGCTACCGGAGAAATCGGGATGGCCTCAGGGGTTAGCGAGTTTCAGAGCTCCTGAGAAAGCCAGACTTCTTCTTGGTGGTAGAAGGGAGTCATCTGTTGGACAAGTAAGACATTTCAAAACCAAAGAGATGAAGATGGATAACATAATTCTTTTTGTTATTTGGATTTTTCTACATTGATTCGGCTACAGTTTTTATGACCAAATTTGGTTTTTAATTTTAATTTCTATTACAAAAGCTTTTCTAAAGTCATTACTCACCTAATAGACAGAGAATCAGAATTTTAATTAGGTAACTTTGTTCATCTTTCAATCATTTTTCCCCCAATCACATTTTTGTTCATGCAGGTAATTGCTCTCTATTTACGGTCAAACCTTAAGAATGCCGCCAATGGTGAAAATAGTAATCATGATGCAGAAGAGCAACATGGTCAGCTAGGTTGATATTGCCAAAGTTGTTCTCTGTTGTTGATAACTTGCTTCCCAGCCATACTTGTCTCTTATCTAAAAAAAAGTTGTTGATAACTTGAATATCAAATCATTCTAACCAGCTGAATGATGACATTGACATCTTTTTGGTTTACATGGATTTATTCTGAATATTTTAATAGTTAATAGGTTTTCATAGGGTTAAGTTACTGCAAACAACATAACCTAACCTACCGATTTAGATTACTGCCTTTTCTTATAATTTAAACTGTCATTTAAAGCATTTTTCTCTAATTAACTTAACTATAGGTGATAACACCCCTTTTAAGTGTTGAACGTCCACATCACCTAAGCAATAAACATGTCCCATAATTTTTAACCTTATCTTATTGTAACAAATTAGTTTATATACAAGCAGACAGCTCGAAGCAAAAATCAGTGTCTATTGACTCTGTTCTAATTAGCTTCACCCTGATTTATATTAGAAGTATAAAATATCAATGGAATAGCATTTATAGAATGAAAAATTTGATAATGATGGCACTTTTGTTTAAAACATCAAAATATAACGGTCTATACTGCATTAGAAAAGTAGATGGTAGCAAGACTTTATTATGGGAACGACAGATATTGACCTTGGCTTTTTGACAAGATGTCATTTATAGTTTCATGTGCTGAATTTTTCTTAACTTGATTTTCAGTTTGAGTTGAAATGGTGCATATTTTTTCCATCTCATTCATCTCCATTTCACTTTCATGTATATTTTACTCTCAGATGGAGAAATTGATTTTGTGAGGATAATAAATAGAGTCGTTCCTAATGACATTCGGGTTTTAGGCTGGTGTACTGTTCCTGCTGGCTTCAGTGCAAGGTTTGTCCTGCTCCTGTGAAATTTATCATTTTCTTTTTGTGGATTTATTTGTTTCCCTTTTCTTGTGAGAGATGTGATGTGATGATATGTAACTTTTTAATGCGCAGAAGATCTCTGTGAAACCAGCAATCAACGGATTTAAAAATCATTTCAATCGGCTTAAACAACAAAATTGATGCGCCTACATGAAATTTTGACCATAGCAGTGCTACGTTTTAACATTCTAAATTTTGGTATGCCTCTCTTAGAATTGCAGTGACCTGTAACATCTCCATGCACCCCTTACCTCATACAAACAACTTAACTTATGTGTTCTTTTTGCATGTCTTTGTTAGATATAACTTGGGCCACATGCTACTTAAGTTGTCTGGACATGCTTAACTCTGCCGATGTATGGCGTCATGGTCTGGGGATGACATTTTATATTATTTTGGAGCATTGGTTTAAAGCCACATTGTAATTTATTAAAAAACAGTTAAAAAAAAATGTTAAAATCCTAATTTTTGGGTGTCATACTCGATGATGAATAGTATTTCATGTTTCTTTTTGCATTTCTTTGTTAGATATGTCTGGAGCTACATGTTGCTTAAGGTGTTATACTTGATAATCATGAGTACTCGATGCTCCACATACACACAGGTACTAAATGCATGGCCAATGCTCCACATACACAGGTCACAATATTATTCTCTCCCAAATGGAAACAATCTGCTGAACATTCCTGCCTAATGATTTTTCTTCTCTCTTTCTCTCTCACTCTCTTTCAATTGGCCACAATTCTAGTTGACGGTCAGCCTATTTTAATAGGAACTTTTATAATATCTACTAATATGCTCGATTCGTCAAAAAAAGAAAGAGATGAAATTTACACTGTATGCATGTTGGGGCTTAGGGGTCTAAATTTCGTAATGGCAGTACTTTTAATCAATGTTCTATATTGCATATTTCTCTTTTTCCATCTTGTACATATTGTGTGACATGGACAAATAAACCTTCCAAAATAGTGGTGTTGAACGCCAAAGCGAGCATAGCTCAACGGTAATTGATGTACCCTCGATCAAGACGTCATAGGTTTGAATGCCTCCACCCCCAAATTTTAATATACTTAAAAAAAATAGTGGTGCATGGAATTTGTGCCGTATAAATCATTTATTTTTTAGGAGCGCGCAATTGACTTTTATGCTTCATACATAAAACCAACATGTGCATAGAGTATGGTTTTGCAAATATCTCTAAATATTTACATTGTATTATCCTCCTAGCGCCTCTTCATGTCCCTTCATTGTTAAGGAGCTATTCAAGCTCAACTCCAAAGATCCAGTCTACCTTGTTCTATTCAACAATTCCAACGAGTAAGCCCATTCTTCTGGTTAGATGGCATAAGATGAAAAAGATAGATAAAAAATTCGGCATATTATGATAAGTGATATTGATTATTTGGAGACATTTTAAATTTTCTTTTGTCATAATGTTGAAACCAGAAAAATGTAGGGTCGAAAATGATTTTTTTTTTTTTGGAAGCAGACATGTATCTATACTTCAAACAAAAATTGTTCAATTTTTCATTTAATTGTGGCAATGTTAGTTTGATGCATCTAACCGTTATGGCAGGTTAAATTATGGATTGTTTTTGCATATTGTAAATTATGGCAGGTTCGATGGCAAGTATGAGAGAGCATCGTCCTCATAAGCTACAAAAGAAGTTAGAGGACTTTAGCTCATTCTGGTACGTATCAAAATGTATCCTAAAAGCATACCATAGAATGTCCTGCACCTTGTTTAATTGAAGAGATCAAATATTATGTTTCTCGATGATACAAGCTTGATGATGGGTGTATACAGAAAATAATATCAAGTAACCTTTTGTTATATTCTATTGAATATGCACCTTGTTTAATCGAAGAGATCATGTATTATGTTTCTCGATTATACAAGCTTGATGATGGGTGTATATAGAAAATAATATCAAATAATCTTTTTATACTCTATTGAATGTATTGTTAAAATAAAATAAAACACTAACTATCTAGAAGTTTCTTGGAGTCCTACGTACCTATCTTAAATATGTCGTATTAGTTTTCATAGATTTACATACGGAAGTTTAGATAACAGTAGACTTCAAGGAAATATCTGGAGGCTCTAGAAGCTGATTGCAAATTGATCGAGAGTGAAAATTGAAGCAGGGCTGAGGGAGAAATCAGAGCAAGCTTTAATGTGGACCTAAGGGTTCAACGGTGCTGATTTTTTGGCAGCGAAGGAAGTTTACTTGTAATTGTTTTGTTTTTTTTTAACCTTGATCGTATACTGCTTTATTCCATCCTCTTCTCACTGTGAGTGTAAAGATTTCTATTGAGACAGTGAATGGTCCTAAAGTTGGATGTAGATCACTGTTGTGATCAAACCACTATAAATCATTGTGTTAATTTCTTCTTCCATTTATATTTTATGGTTGTTTCATTCATTGGTAAATTTGTCAGTTCTCATATTGTGTTTGATATATTTTTTGTGGTTATCTGCTATTATTTTTTGTGATATTTGAGTCTGATTAAATGGTAGCAAAAATTGAAGTAGAGAGATTTGATGGAAAGAGTGATTTTGCTCTTTGAAGAAAGATGAGATCTGATTATCTGCCATTATTTTTTGTACCTCATTGATAATGTTCTCTTACAAGTTCTTGATGAAAAAAGTGCACATGAGGTATGGACTAAGCTCGGCTCGATTTATCTTATCAAGTCCTTGATTTGAAATGGATGCTTCAAGAGATCTTGACTTTAATTTAGATGATCTTAATCACAGTGTGTTAGACTCGAGTAATATGGAAGAGACAGTGATTGGTGAAAATAAAGCAATTGTTGATCGCTTATCGGTTCATATAATGGAGTAAAAACGACAATTAAGTATGAAAGAGATAGCTTTACCATGGATATTGTGTTAAGTGCACTTAAATCAATCGAACTTGAATTAAGGAAGAACAAGGATAGATAATGAAAGCCTAGGGCTAGGTAAAATAGAGGAAAGATCCAAAGAGGTATTAGTAAAGGGCGATCAAAGTCACAAGGGAAGTCCAAAAAGTGAGAAGGAATTATTTCGAACTCAAAAAACAAAAAAGAGAATGAAGGAAAGGAAGATGATTGATTCAAACAATGCCAATGTGATAGAAAAATTTTAATCGGCATAAGTTTTGACAGTTTCAACAAGGAGTTTCGACCGTGATGGACAACAATGAATACTTGACTTCATAAGCACATTTGAATTCATTTCTAACAAATAAATTTACAGGTGGAAGTAGTGTTTATAAATTTAATTTTCAAAAACAAAAACCTAAATAATTATCAAACGGGACCTAAAGATTACACTTCATAGGGAAATCATACCTTCATTTGTCAGTGTAGATATAGTCTACTATGCTTTGAAGATAGAGATTGAGTTTGCAAACCATGAGCCATTGACTTACCATGAATCTATAAATTCAAAGGATAATAGCAAATGGAAGTTATGCAAGATGAAATTAACTCGATTAAAAACTAAACTTGGATTTTGTTGAGAAACACAATAACAAAAACTCAAACATGATCTGGATTAATTATGGTGAGATTTTTTACCAATTGTGTTCAACACTCTTCTATAAGAGTTCTGCCTTCTTTGCTCACAACTTATCATTTAAAGCTTGAGCAAATGGACAATAAAACAACCTTTTTAGATGGTGATCAAACTATCTACCTGCAACAACTTATGAGATTTGTAGCCGAAGGGAATTGAAAATAAGGTTTTACGAGATAACATAAATTTAGAGATTTAACTTTCAAAACCAATACTTTTAGTCATTATAATTTAAAATTGATTTCTACCGATTTCAAAAGTAATATGTATGACCACTATCAGTGGCCTACTAGATATAAAATAAAAAATTAAAAGATTTTTTAGACACAATTAAAATTTGAAATAACTATTAGGCAAAAAATTCAAAGTTAAGAGAATTATTAGATACAAATTTGAATTTTCACCACTCACCACTATCGCACAGAAGGTTCATACTACCCGTCTAACCCCTCGTTCCTCAACCCTTTGATGAAAGTCCTAGTTCTTTGGGCCTTCGTGACCTAAAACCCCTCCTTGCATCTTTGTGGATGGACTCCAACGAACTGGACCAATACGACACCAATGATGATATGGATTTTACCAACAACAAGAGGCCCACGGCATGGCATCATCCAGTCCTTAGAATGCAGGGCCAGGATTCATCCGGTGCATTTCTATAA

mRNA sequence

ATGGAGAATCCAGAGAGCGAGAGCGAAATCCGAGAAATTGAAGAAACAGGCTCGAACTCGGAGCTGCAACCTCTTCTTCAAAGCCAGAATCCGAGTTCGAACTCCAAAACCGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGATCAAGACCAGCTCGAGGTCCGGGAGATTCTCGACAATTACGGCTTCAAATCCGTATTCGCCTTTAAACCTGACTCCGGTCGTGGCGTTCCGATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTCCATTGACGGAGAGCCCAAGGGCAGCAGAGGATGTGAACCATATTCTTTAGATGAGTATGTTTGTGGAGAAAAATTTTCAAATATTCTTGGTGATGTTGGCTCCCTCTTAGAGTTGCCATGTTGTCATGTGAGATTCATTGAAGTGCTTGCAAGCTGGCTCAACACTCATGGATACATAAAATGGAAAATTTTGGATTCCCTGATCAAACCAGTAACCAGGATTATTTTTGGTGTGGCAATTATAACCGTTTTGATTACGTTTCTCTCTCGAGGCTCGCAAGGATGGATGAAGAAATTAAATATCAATGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACGCGCTCGAGGAAGAGAACTAGAGACTTGCTGAAAAAGTACGAGAAGCTACCGGAGAAATCGGGATGGCCTCAGGGGTTAGCGAGTTTCAGAGCTCCTGAGAAAGCCAGACTTCTTCTTGGTGGTAGAAGGGAGTCATCTGTTGGACAAGTAATTGCTCTCTATTTACGGTCAAACCTTAAGAATGCCGCCAATGGTGAAAATAGTAATCATGATGCAGAAGAGCAACATGATGGAGAAATTGATTTTGTGAGGATAATAAATAGAGTCGTTCCTAATGACATTCGGGTTTTAGGCTGGTGTACTGTTCCTGCTGGCTTCAGTGCAAGATATGTCTGGAGCTACATGTTGCTTAAGGTGTTATACTTGATAATCATGAGTACTCGATGCTCCACATACACACAGGTACTAAATGCATGGCCAATGCTCCACATACACAGGAGCTATTCAAGCTCAACTCCAAAGATCCAGTCTACCTTGTTCTATTCAACAATTCCAACGAGTTCGATGGCAAGTATGAGAGAGCATCGTCCTCATAAGCTACAAAAGAAGTTAGAGGACTTTAGCTCATTCTGTCCTAGTTCTTTGGGCCTTCGTGACCTAAAACCCCTCCTTGCATCTTTGTGGATGGACTCCAACGAACTGGACCAATACGACACCAATGATGATATGGATTTTACCAACAACAAGAGGCCCACGGCATGGCATCATCCAGTCCTTAGAATGCAGGGCCAGGATTCATCCGGTGCATTTCTATAA

Coding sequence (CDS)

ATGGAGAATCCAGAGAGCGAGAGCGAAATCCGAGAAATTGAAGAAACAGGCTCGAACTCGGAGCTGCAACCTCTTCTTCAAAGCCAGAATCCGAGTTCGAACTCCAAAACCGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGATCAAGACCAGCTCGAGGTCCGGGAGATTCTCGACAATTACGGCTTCAAATCCGTATTCGCCTTTAAACCTGACTCCGGTCGTGGCGTTCCGATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTCCATTGACGGAGAGCCCAAGGGCAGCAGAGGATGTGAACCATATTCTTTAGATGAGTATGTTTGTGGAGAAAAATTTTCAAATATTCTTGGTGATGTTGGCTCCCTCTTAGAGTTGCCATGTTGTCATGTGAGATTCATTGAAGTGCTTGCAAGCTGGCTCAACACTCATGGATACATAAAATGGAAAATTTTGGATTCCCTGATCAAACCAGTAACCAGGATTATTTTTGGTGTGGCAATTATAACCGTTTTGATTACGTTTCTCTCTCGAGGCTCGCAAGGATGGATGAAGAAATTAAATATCAATGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACGCGCTCGAGGAAGAGAACTAGAGACTTGCTGAAAAAGTACGAGAAGCTACCGGAGAAATCGGGATGGCCTCAGGGGTTAGCGAGTTTCAGAGCTCCTGAGAAAGCCAGACTTCTTCTTGGTGGTAGAAGGGAGTCATCTGTTGGACAAGTAATTGCTCTCTATTTACGGTCAAACCTTAAGAATGCCGCCAATGGTGAAAATAGTAATCATGATGCAGAAGAGCAACATGATGGAGAAATTGATTTTGTGAGGATAATAAATAGAGTCGTTCCTAATGACATTCGGGTTTTAGGCTGGTGTACTGTTCCTGCTGGCTTCAGTGCAAGATATGTCTGGAGCTACATGTTGCTTAAGGTGTTATACTTGATAATCATGAGTACTCGATGCTCCACATACACACAGGTACTAAATGCATGGCCAATGCTCCACATACACAGGAGCTATTCAAGCTCAACTCCAAAGATCCAGTCTACCTTGTTCTATTCAACAATTCCAACGAGTTCGATGGCAAGTATGAGAGAGCATCGTCCTCATAAGCTACAAAAGAAGTTAGAGGACTTTAGCTCATTCTGTCCTAGTTCTTTGGGCCTTCGTGACCTAAAACCCCTCCTTGCATCTTTGTGGATGGACTCCAACGAACTGGACCAATACGACACCAATGATGATATGGATTTTACCAACAACAAGAGGCCCACGGCATGGCATCATCCAGTCCTTAGAATGCAGGGCCAGGATTCATCCGGTGCATTTCTATAA

Protein sequence

MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILDSLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYEKLPEKSGWPQGLASFRAPEKARLLLGGRRESSVGQVIALYLRSNLKNAANGENSNHDAEEQHDGEIDFVRIINRVVPNDIRVLGWCTVPAGFSARYVWSYMLLKVLYLIIMSTRCSTYTQVLNAWPMLHIHRSYSSSTPKIQSTLFYSTIPTSSMASMREHRPHKLQKKLEDFSSFCPSSLGLRDLKPLLASLWMDSNELDQYDTNDDMDFTNNKRPTAWHHPVLRMQGQDSSGAFL

Homology

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BLAST of Lag0029615 vs. NCBI nr
Match: XP_008456707.1 (PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 4.2e-86
Identity = 174/246 (70.73%), Postives = 182/246 (73.98%), Query Frame = 0


Query: 5   ESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64
           +SE+EIRE++ET S SELQPLL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL
Sbjct: 3   QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 62

Query: 65  GGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEP 124
           GGWDQDQLEVR+ILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI IDGEP
Sbjct: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122

Query: 125 KGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILD 184
           K                                                          D
Sbjct: 123 K----------------------------------------------------------D 182

Query: 185 SLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTR 244
           SLIKPVTRIIFGVAIIT+LITFLSR SQGWMKKLNI GNFPPWILACVVIVFTRSRKRTR
Sbjct: 183 SLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTR 190

Query: 245 DLLKKY 251
           DLLKKY
Sbjct: 243 DLLKKY 190

[Close]

BLAST of Lag0029615 vs. NCBI nr
Match: XP_022134510.1 (uncharacterized protein LOC111006735 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 5.5e-86
Identity = 174/250 (69.60%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           MENP++ESEIREIEETGSNSE QPLLQSQNPSS+SK VKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MENPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGWDQDQLE+REILD YGFKS FAFKP++GRGVPIRFNPRNGRSILTYRDGAEI I
Sbjct: 61  KSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPRNGRSILTYRDGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSR 240
              DSLIKP+TRIIFGVAI+T+LITFLSR SQG MKKLNI+GNFPPWILACVVIVFTRSR
Sbjct: 181 ---DSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSR 192

Query: 241 KRTRDLLKKY 251
           KRTRDLLKK+
Sbjct: 241 KRTRDLLKKF 192

[Close]

BLAST of Lag0029615 vs. NCBI nr
Match: XP_022990468.1 (uncharacterized protein LOC111487320 [Cucurbita maxima])

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-85
Identity = 178/252 (70.63%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           ME+ +SESEIREIEET SNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGW+QDQLEVREILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI I
Sbjct: 61  KSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFL--SRGSQGWMKKLNINGNFPPWILACVVIVFTR 240
              DSLIKPVTRI+F VAIIT+LIT L  SR SQGWMKKLNI GNFPPWILACVVIVFTR
Sbjct: 181 ---DSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTR 194

Query: 241 SRKRTRDLLKKY 251
           SRKRTRDLLKKY
Sbjct: 241 SRKRTRDLLKKY 194

[Close]

BLAST of Lag0029615 vs. NCBI nr
Match: XP_004140944.1 (uncharacterized protein LOC101218374 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 8.0e-85
Identity = 171/246 (69.51%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 5   ESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64
           +SESEIRE+EET S SELQPLL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSL
Sbjct: 3   QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSL 62

Query: 65  GGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEP 124
           GGWDQDQLEVR+ILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI IDGEP
Sbjct: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122

Query: 125 KGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILD 184
           K                                                          D
Sbjct: 123 K----------------------------------------------------------D 182

Query: 185 SLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTR 244
           SLIKPVTRIIFGVAIIT+LITFLSR SQGWMKKLNI GNFPPWILACVVIVFTRSRKRT+
Sbjct: 183 SLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTK 190

Query: 245 DLLKKY 251
           DLLKKY
Sbjct: 243 DLLKKY 190

[Close]

BLAST of Lag0029615 vs. NCBI nr
Match: XP_023518857.1 (uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-84
Identity = 176/252 (69.84%), Postives = 182/252 (72.22%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           ME+ +SESEIREIEET SNSELQPLLQS N SSNSKTVKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MEDHQSESEIREIEETSSNSELQPLLQSPNTSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGW+QDQLEVREILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI I
Sbjct: 61  KSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFL--SRGSQGWMKKLNINGNFPPWILACVVIVFTR 240
              DSLIKPVTRI+F VAIIT++IT L  SR SQGWMKKLNI GNFPPWILACVVIVFTR
Sbjct: 181 ---DSLIKPVTRIVFAVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTR 194

Query: 241 SRKRTRDLLKKY 251
           SRKRTRDLLKKY
Sbjct: 241 SRKRTRDLLKKY 194

[Close]

BLAST of Lag0029615 vs. ExPASy Swiss-Prot
Match: Q9JI38 (tRNA pseudouridine(38/39) synthase OS=Mus musculus OX=10090 GN=Pus3 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 6.9e-07
Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 282 SSVGQVIALYLRSNLKNAANGENSN--HDAEEQHDGEIDFVRIINRVVPNDIRVLGWCTV 341
           S+ GQVI+L LRS    + + E+SN  H+A++    EI +  I+NRV+P DIRVL W  V
Sbjct: 123 SAFGQVISLDLRSQFPTSRDSEDSNLKHEADDLAK-EIRYTHILNRVLPADIRVLAWAPV 182

Query: 342 PAGFSARY 348
              FSAR+
Sbjct: 183 EPSFSARF 189

[Close]

BLAST of Lag0029615 vs. ExPASy Swiss-Prot
Match: Q3SX07 (tRNA pseudouridine(38/39) synthase OS=Bos taurus OX=9913 GN=PUS3 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.0e-05
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 282 SSVGQVIALYLRSNLKNAANGENSNHDAEEQHDG-EIDFVRIINRVVPNDIRVLGWCTVP 341
           S+ GQVI+L LRS++    + E+ N   E      EI +  I+NRV+P DIRVL W  V 
Sbjct: 122 SAFGQVISLDLRSHIPKGRDSEHFNLKNEVNDVATEIRYTHILNRVLPPDIRVLAWAPVE 181

Query: 342 AGFSARY 348
             FSAR+
Sbjct: 182 TSFSARF 188

[Close]

BLAST of Lag0029615 vs. ExPASy Swiss-Prot
Match: Q9BZE2 (tRNA pseudouridine(38/39) synthase OS=Homo sapiens OX=9606 GN=PUS3 PE=1 SV=3)

HSP 1 Score: 52.0 bits (123), Expect = 2.2e-05
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 282 SSVGQVIALYLRSNLKNAANGENSNHDAEEQHDG-EIDFVRIINRVVPNDIRVLGWCTVP 341
           S+ GQVI+L LRS      + E+ N   E      EI +  I+NRV+P DIR+L W  V 
Sbjct: 122 SAFGQVISLDLRSQFPRGRDSEDFNVKEEANAAAEEIRYTHILNRVLPPDIRILAWAPVE 181

Query: 342 AGFSARY 348
             FSAR+
Sbjct: 182 PSFSARF 188

[Close]

BLAST of Lag0029615 vs. ExPASy TrEMBL
Match: A0A1S3C3V7 (uncharacterized protein LOC103496571 OS=Cucumis melo OX=3656 GN=LOC103496571 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.0e-86
Identity = 174/246 (70.73%), Postives = 182/246 (73.98%), Query Frame = 0


Query: 5   ESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64
           +SE+EIRE++ET S SELQPLL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL
Sbjct: 3   QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 62

Query: 65  GGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEP 124
           GGWDQDQLEVR+ILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI IDGEP
Sbjct: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122

Query: 125 KGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILD 184
           K                                                          D
Sbjct: 123 K----------------------------------------------------------D 182

Query: 185 SLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTR 244
           SLIKPVTRIIFGVAIIT+LITFLSR SQGWMKKLNI GNFPPWILACVVIVFTRSRKRTR
Sbjct: 183 SLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTR 190

Query: 245 DLLKKY 251
           DLLKKY
Sbjct: 243 DLLKKY 190

[Close]

BLAST of Lag0029615 vs. ExPASy TrEMBL
Match: A0A6J1BYH2 (uncharacterized protein LOC111006735 OS=Momordica charantia OX=3673 GN=LOC111006735 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.7e-86
Identity = 174/250 (69.60%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           MENP++ESEIREIEETGSNSE QPLLQSQNPSS+SK VKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MENPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGWDQDQLE+REILD YGFKS FAFKP++GRGVPIRFNPRNGRSILTYRDGAEI I
Sbjct: 61  KSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPRNGRSILTYRDGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSR 240
              DSLIKP+TRIIFGVAI+T+LITFLSR SQG MKKLNI+GNFPPWILACVVIVFTRSR
Sbjct: 181 ---DSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSR 192

Query: 241 KRTRDLLKKY 251
           KRTRDLLKK+
Sbjct: 241 KRTRDLLKKF 192

[Close]

BLAST of Lag0029615 vs. ExPASy TrEMBL
Match: A0A6J1JTD1 (uncharacterized protein LOC111487320 OS=Cucurbita maxima OX=3661 GN=LOC111487320 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 7.8e-86
Identity = 178/252 (70.63%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           ME+ +SESEIREIEET SNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGW+QDQLEVREILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI I
Sbjct: 61  KSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFL--SRGSQGWMKKLNINGNFPPWILACVVIVFTR 240
              DSLIKPVTRI+F VAIIT+LIT L  SR SQGWMKKLNI GNFPPWILACVVIVFTR
Sbjct: 181 ---DSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTR 194

Query: 241 SRKRTRDLLKKY 251
           SRKRTRDLLKKY
Sbjct: 241 SRKRTRDLLKKY 194

[Close]

BLAST of Lag0029615 vs. ExPASy TrEMBL
Match: A0A0A0K9G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052730 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 3.9e-85
Identity = 171/246 (69.51%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 5   ESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64
           +SESEIRE+EET S SELQPLL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSL
Sbjct: 3   QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSL 62

Query: 65  GGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEP 124
           GGWDQDQLEVR+ILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI IDGEP
Sbjct: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122

Query: 125 KGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILD 184
           K                                                          D
Sbjct: 123 K----------------------------------------------------------D 182

Query: 185 SLIKPVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTR 244
           SLIKPVTRIIFGVAIIT+LITFLSR SQGWMKKLNI GNFPPWILACVVIVFTRSRKRT+
Sbjct: 183 SLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTK 190

Query: 245 DLLKKY 251
           DLLKKY
Sbjct: 243 DLLKKY 190

[Close]

BLAST of Lag0029615 vs. ExPASy TrEMBL
Match: A0A6J1HAT7 (uncharacterized protein LOC111461110 OS=Cucurbita moschata OX=3662 GN=LOC111461110 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-83
Identity = 175/252 (69.44%), Postives = 181/252 (71.83%), Query Frame = 0


Query: 1   MENPESESEIREIEETGSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60
           ME+ +SESEIREIEET SNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF
Sbjct: 1   MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVF 60

Query: 61  KSSLGGWDQDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISI 120
           KSSLGGW+QDQLEVREILD YGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYR GAEI I
Sbjct: 61  KSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRGGAEIYI 120

Query: 121 DGEPKGSRGCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKW 180
           DGEPK                                                       
Sbjct: 121 DGEPK------------------------------------------------------- 180

Query: 181 KILDSLIKPVTRIIFGVAIITVLITFL--SRGSQGWMKKLNINGNFPPWILACVVIVFTR 240
              DSLIKPVT I+F VAIIT++IT L  SR SQGWMK LNI GNFPPWILACVVIVFTR
Sbjct: 181 ---DSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTR 194

Query: 241 SRKRTRDLLKKY 251
           SRKRTRDLLKKY
Sbjct: 241 SRKRTRDLLKKY 194

[Close]

BLAST of Lag0029615 vs. TAIR 10
Match: AT1G71780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 214.9 bits (546), Expect = 1.4e-55
Identity = 118/242 (48.76%), Postives = 141/242 (58.26%), Query Frame = 0


Query: 11  REIEETGSNSELQPLLQSQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWD 70
           +EIEET       PLL++  P S   S T   KVPEVEIHLY+ GKGPIDVFKS+LGG++
Sbjct: 18  QEIEET------TPLLENSQPESELRSTTAAAKVPEVEIHLYKCGKGPIDVFKSNLGGYE 77

Query: 71  QDQLEVREILDNYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEISIDGEPKGSR 130
           QDQLEVR IL+ YG K++FAF  + GR VPIRF+PRNGRS+L YRDGA I IDGEP+   
Sbjct: 78  QDQLEVRSILEKYGLKAIFAFNVEKGRAVPIRFHPRNGRSVLPYRDGAVIYIDGEPQ--- 137

Query: 131 GCEPYSLDEYVCGEKFSNILGDVGSLLELPCCHVRFIEVLASWLNTHGYIKWKILDSLIK 190
                                                                  DSL+K
Sbjct: 138 -------------------------------------------------------DSLLK 195

Query: 191 PVTRIIFGVAIITVLITFLSRGSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLK 250
           P+TRII GV I+T+LITFL +    W+K     G FPPW+LAC+VIVFTR+RKRTRD  K
Sbjct: 198 PITRIILGVVIVTLLITFLLKDPPAWIKNNISIGTFPPWVLACIVIVFTRARKRTRDFFK 195

[Close]

BLAST of Lag0029615 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 70.9 bits (172), Expect = 3.3e-12
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 266 FRAPEKARLLLGGRRE-------------SSVGQVIALYLRSNLKNAANGENSNHDAEEQ 325
           F+A E+ RLL+G +++             SS GQVIAL+LRS LK+      +  +    
Sbjct: 121 FKALERTRLLVGDKKDSCYSRCGRTDKGVSSTGQVIALFLRSRLKSPPGDSKAQVNGRTG 180

Query: 326 HDGEIDFVRIINRVVPNDIRVLGWCTVPAGFSARY 348
              E D+VR++NR +P+DIRV+GW   P  F AR+
Sbjct: 181 ERPEYDYVRVLNRALPDDIRVIGWSPAPIDFHARF 215

The following BLAST results are available for this feature:

BLAST of Lag0029615 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456707.1	4.2e-86	70.73	PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]	[more]
XP_022134510.1	5.5e-86	69.60	uncharacterized protein LOC111006735 [Momordica charantia]	[more]
XP_022990468.1	1.6e-85	70.63	uncharacterized protein LOC111487320 [Cucurbita maxima]	[more]
XP_004140944.1	8.0e-85	69.51	uncharacterized protein LOC101218374 [Cucumis sativus]	[more]
XP_023518857.1	2.3e-84	69.84	uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0029615 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9JI38	6.9e-07	47.06	tRNA pseudouridine(38/39) synthase OS=Mus musculus OX=10090 GN=Pus3 PE=1 SV=2	[more]
Q3SX07	1.0e-05	44.78	tRNA pseudouridine(38/39) synthase OS=Bos taurus OX=9913 GN=PUS3 PE=2 SV=1	[more]
Q9BZE2	2.2e-05	43.28	tRNA pseudouridine(38/39) synthase OS=Homo sapiens OX=9606 GN=PUS3 PE=1 SV=3	[more]

BLAST of Lag0029615 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3V7	2.0e-86	70.73	uncharacterized protein LOC103496571 OS=Cucumis melo OX=3656 GN=LOC103496571 PE=...	[more]
A0A6J1BYH2	2.7e-86	69.60	uncharacterized protein LOC111006735 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JTD1	7.8e-86	70.63	uncharacterized protein LOC111487320 OS=Cucurbita maxima OX=3661 GN=LOC111487320...	[more]
A0A0A0K9G4	3.9e-85	69.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052730 PE=4 SV=1	[more]
A0A6J1HAT7	1.2e-83	69.44	uncharacterized protein LOC111461110 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of Lag0029615 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71780.1	1.4e-55	48.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G34150.1	3.3e-12	38.95	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 278..348 e-value: 5.4E-6 score: 28.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR35475	WD REPEAT PROTEIN	coord: 177..249
None	No IPR available	PANTHER	PTHR35475	WD REPEAT PROTEIN	coord: 12..127
None	No IPR available	PANTHER	PTHR35475:SF3	SUBFAMILY NOT NAMED	coord: 12..127
None	No IPR available	PANTHER	PTHR35475:SF3	SUBFAMILY NOT NAMED	coord: 177..249
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 283..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029615.1	Lag0029615.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0016020	membrane
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding