Lag0029547 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGAAGGCTAAATCTTCTGCTTCTGTTCAATCCAAGCCTGACCCATAGTAAGCCTCCTTTTCTTACTCACTTTCATTCTGTTCGGACCTTCCTCCGTCTCTTCTCCATTCGATTTCTTACCTGAATCTTTTTGTTTTAACTTGAAATTGATTGCGTTTTTGGAATTTGATCAACGCAGTTCCTATGAAGGGGAACGTCTCGATGAGTTGCTACAGTCGATTCAGAGGTAAACGAGACTCAATTTGTCTAATAATGCACTTCAAGCCACCAGTAACTGATCGTTGTGTTTAACAGGGAGATAAAGCGAGCAAGAGTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTCAAGGTTTTTATTTTTTTGTTTTTTTGTTTCAATGATGTCCTTTCGTATTTTCAACGTCTTTAGTTTCTTCTTGCAAGTCATTTCAATAATGTTTCTTGTTTCTAAGTTACAGAAGCAAAAATTTAATTTATCGTTCTTTTTATAAGCTACTTATGTTGAGTGATGGGTTTCTTCTTAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGAAGCCAAGTGGAGATTCTGCTAGCATAACGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGTTAGTCTACTCTTATGTTTATATTGGGCAATACTATCTAGGGTTTAGGAATTAGCGGTAGTAGAGTAGTGAAACTATACTGCCGAATGCTTAATATTGATAGAATCCCCAGCTTTACCCTTCTAGGGTCGTGTTGTTGCAGTTCACTTTATTATTTCTGGTGGATTGATGGACCCTTTCATTAACTCGAAGTCATAAGTATTACTTTCTACGGTATGCTTAGAAGCGAAGATGAAGTCCATGGATGAGCCCTCCCATGAGTCTTTTTGGATTAGGCATTGGTGTATATAGTTCAGACCTGCCACTTGAGAAACAAGATATCTCGTAGAGTTAGTAACTTCTATCCTAGTTTGTGGCCTAAAGAAATGTACTTATCCGTCCAAAGTGTCCAATTCATCCATTTGAGAGTTACTTGAAGCAAACAATAGTTTCTTTTGAGAGAAACACTTCTGCTGTGGAAAACTCTTGCTGATTCTCATGTTGATGGCAACTATACTAACACTGCCTAAAGCCCTGCCCCTCATCATCTTCATATAGTTTTCTATGGTGTCAAAGGGTATCAACAAAGCCCTTGGTGTAGTTGGCACGGTTACATGCCTTCTTGGGAGTATGCTACATGATTGGTATAGCCCATGAGATGTGCTTAACCATATCCTACAGAATGTTATTTTTGAAGTAATCCATTTCAATTTTTGGTGCCAATATAAATCAAATATAGTGGCCATTATGTAGTGTTTCTTATGTAGCGAGAATTTGGTTGAGGCTTAGAGCTCCTATTGGTAAGTGGACTATTTCCTCCCTTGTAGGCTTAGTTTCTCACTAAAATATTCCATAGCCTTAACATTTTGAGATAGGACTGCTCCTATCCTTTGCAGAAACATCCATCTCGACTTCAAAGAGGATGCCAAATTTTGGCAAGGCCAAGGTGGCTGCAAATATCTATTTTCTTTGAGTGTTTGGCGGCCTATTTTTTTAATCCCAAGATACTTTGAACGTACCCAACAAAGGGAAAAGGATGTTAATTTCATTAACTTCAAACATCTTTTGCAACGTTTGGCGTGGGATAAGATGTATGTTTATTCCCACGATGGATCCTAAGAATAACCGTTTTAATTGTAAGAGATATGCACTTAGAGATATTAAAGAAAAAGCTTAGTGGATTTTGGAGCAGTAAAAATTTCCTATAGATACTATAATGTGTCTTGTGTTGGCTGACTTAGTTTGTCATCCAAGTAGATGACATTATTCCACTCTCTCAAGTGTTAATTGAACACAACCGATCGTGCATTGCCTACTGTCTTTCGGTATACGGTGTCTAATTACTTGGCTTTCATCTTTTATTATGTAGGCTATACTGTTAACTGCTGATTGCAACCCTCTATGGCTGACAAACCATGTGCCAAGCTTGGCCATATCTAGGAAGGTACCATTGATACTCGTGAAAGGTAAAGAAGGATCTTTAAGGTTAGGTCAACTCGTCAACCTTAAAACAGCAATTGCAATTGGAATAAAGGTGAGGAGGAAATATTAGACAATGAACTGCCTTTAAAGGTCTACGTTTCTTGTGTTCTGTTGAACCTTTTCAAAAAACTATTATTGACAAAGTTACATGTTTGCAAACGAATTGCAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAAGATAG ATGGGAAAGAAGGCTAAATCTTCTGCTTCTGTTCAATCCAAGCCTGACCCATATTCCTATGAAGGGGAACGTCTCGATGAGTTGCTACAGTCGATTCAGAGGGAGATAAAGCGAGCAAGAGTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTCAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGAAGCCAAGTGGAGATTCTGCTAGCATAACGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACTGCTGATTGCAACCCTCTATGGCTGACAAACCATGTGCCAAGCTTGGCCATATCTAGGAAGGTACCATTGATACTCGTGAAAGGTAAAGAAGGATCTTTAAGGTTAGGTCAACTCGTCAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAAGATAG ATGGGAAAGAAGGCTAAATCTTCTGCTTCTGTTCAATCCAAGCCTGACCCATATTCCTATGAAGGGGAACGTCTCGATGAGTTGCTACAGTCGATTCAGAGGGAGATAAAGCGAGCAAGAGTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTCAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGAAGCCAAGTGGAGATTCTGCTAGCATAACGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACTGCTGATTGCAACCCTCTATGGCTGACAAACCATGTGCCAAGCTTGGCCATATCTAGGAAGGTACCATTGATACTCGTGAAAGGTAAAGAAGGATCTTTAAGGTTAGGTCAACTCGTCAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAAGATAG MGKKAKSSASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR Homology
BLAST of Lag0029547 vs. NCBI nr
Match: XP_022938626.1 (ribonuclease P protein subunit p38 [Cucurbita moschata]) HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72 Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Lag0029547 vs. NCBI nr
Match: KAG6579150.1 (hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016668.1 hypothetical protein SDJN02_21778 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.4 bits (716), Expect = 1.0e-71 Identity = 150/168 (89.29%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of Lag0029547 vs. NCBI nr
Match: XP_023549838.1 (ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.9 bits (712), Expect = 2.9e-71 Identity = 148/168 (88.10%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of Lag0029547 vs. NCBI nr
Match: XP_038875290.1 (ribonuclease P protein subunit p38 [Benincasa hispida]) HSP 1 Score: 275.0 bits (702), Expect = 4.2e-70 Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0
BLAST of Lag0029547 vs. NCBI nr
Match: XP_022993803.1 (ribonuclease P protein subunit p38 [Cucurbita maxima]) HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68 Identity = 146/168 (86.90%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Lag0029547 vs. ExPASy Swiss-Prot
Match: Q32LC1 (Ribonuclease P protein subunit p38 OS=Bos taurus OX=9913 GN=RPP38 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 35/112 (31.25%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of Lag0029547 vs. ExPASy Swiss-Prot
Match: P78345 (Ribonuclease P protein subunit p38 OS=Homo sapiens OX=9606 GN=RPP38 PE=1 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04 Identity = 33/112 (29.46%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of Lag0029547 vs. ExPASy Swiss-Prot
Match: Q80UU2 (Ribonuclease P protein subunit p38 OS=Mus musculus OX=10090 GN=Rpp38 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04 Identity = 30/100 (30.00%), Postives = 49/100 (49.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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