Lag0029519 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029519
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	F-box domain-containing protein
Location	chr8: 39725446 .. 39733736 (-)
RNA-Seq Expression	Lag0029519
Synteny	Lag0029519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTCCGCCACCTCCCACCCTCTCTTCCTCTCTCTCCGCCGCCACCACCGCCGTCCCACCTCCCTCTCCCACATCCTCATTTCCTCCGCCTCCCACCTCCTCTCCGCCCCCTCTCCCTCCGCCACCCCTCTCCTCCGACGACCCTCCTCCTCCCCTTCCCCGAACCCCGTCGCCCCATCGTGGCCAAACCCGCCAACGGCCTCCTCCTCCTCCACTTCCCCAACCACCTGTACTCCGACCGGCCCGACCTTCCGGCCGCCGTCTTCAACCCAGGCACCAGAGAGATGTTCTCTCTCCCCCAAAATGGGCACAACGATAATTATGAGCAGAAAGTTAAGGTGTTGTACTATTTTGGGTATGATTTTGTGGAGGGCGTGTACAAGGTGCTGCAGATTTGGAGGTTCATCGATACGAACCTTGAGAGGTCGGAGAGGTCATTGGCTTTTAAGATCGTGACGTTGGGGTCCGGTGAATGGAGATGGATTCGGCCGGATCTTCCGTTGTTTTGTAGCTCTTACTGTGCTTTGTTTTCTTCTTCGTGCGTCTGTAATGGCGGAATTCATTGGGTTGTTCGCCGGAAGAAGTGTGTGTTGGTGTTCGATTTGCATGATGAGCAGTTTCGTTTGATTCCGTTTCCTCAACTTTTCAACAACTACCACAACCACAACCAAGGTAAACAAATACCATCTTTTTCTATTTAAGATTTTCTTTTAAATGTTAAATTAAAAATTTCTTCCCTCTATTCTATCACCATCCATGTATTTAAAATATCATTTTGGTCTTTACTTTTGATTTTGTTTCAATTAAATCTATGTACTTTTTAAAATATAACTAGTTTTAATATTAAATCAAACTTAAAAAAAAAACAATACTTTATTGCATGTCGGTAGAAATATTCCTACCTACCCATCAATCTAAGAAAGATAAAGGTAGAAAATGAGAAGAAAAAAAAAAACTGTTGTCAGTCACATGGTAAGTAGGAAGATCCTTGTATACCAATATACCGTCTAAGTTTGGGACAATTTTTATTAATATTATAATTTTTAAAACTTATTATTAAAATATAATAGTTTTGAAACTTATTATTTAAATATTGCTCTTTTAAATTTGCAGGTGTAGGTCGTCTCTTGAAGAGACGACCATAATCCACGTGTCTGCATGTCGTCTTTTCAAAATACGACATGCAGATGTGGCAAAAATTTAAAAAAAAAAAAAAACGTGGAGGTCGTCTCTTCAAGAGACGACCTCCAGGTGTTTATAATGCAAGTTGCACCCTTGGTAGGGTGGTGAGGGAATTAACTTTTATCCTTGTGGTCCAGGGTTCGACCTCCAGCACGCTCATCTTTGTTATTATTTTTTTTTTTGGTTTTATCTTTTTTTGCATTTTGAAAAATGCTAGCATTTTTTTTTCTTTTTTTTTTCACTTTTCTTTTAAAATTGAAATTTATATACCAGAAATTTAATTTAATGTAGAAATTGTACATTTTTTTTTGCATGTTTTTATTTTGAATTATAAAATTTTTATAATCAACTTTTTAATGAAGTACATATGTTTTTTTTTTGAAAAAATGTGGTTTGTTCTTCTTTTTTCTTTTAATTCTTTATTTTTTAAAATAAAGATATTTTCTTGTTTTTATTTATTTTTTCTCTCAATTAACTAAATATTTTCCTTTTATATGGTAGTCTTTAAAACTTTTTAATAAAATATATCACTTTTGAAATTTATTGTATAAATATTGTAGTTTTAAATTTCCAAGTGAAGATCGACTATTCTACTACATTGACCAGTTAGAGAAAAAAAATTGTTGATGTTACTCATCTAAATTTTAATCAAATCATCAATATCTTTATTTTAAAAAAATAAAAGAAAAAGGAAAAACAAAAAATATATATATTTTTTCAAGAAAAATGTTGACTTAATTAAAAGGTTTTAATTATAAAATTTTATAATTCAAAATAAAAAAAAAACATAAAAAAATGCAATTTCTACATTTAATTAAATTTATGGTATATAAATTTCGATTTTAAAAGAAAAGTGAAAAAAGGAAAAAAAAATATATACTAGCATTTTTCAAAATGCAAAAAAGATAAAAAAAAATAATAATAATAACAAAGATGGAGACGCTGGAGTTCGAACTCTGGACGGCAAGGATGAAATTTAACTCCCTCACCAACCTAACAAGTGTCCAACTTGCGTTATATATTCCTGGAGGTCGTCTCTTGAAGAGACGACCTCCACGTTTTTTTTTTTTTTTTTTTTTTTAATTTTTGCCACATCTGCATGTCGTATTTTGAAAAGACGACATGCAGACACGTGGATTATGGTCGTCTCTTCAAGAGACGACCTACACCTGCAAATTTAAAAGAGCAATATTTAAATAATAAGTTTCAAAACTATTATATTTTAATAATAAGTTTTAAAAATTATAATATTAATAAAAATTGTCCTCTAAGTTTGTTTGAAACTTAAAATTGGTTAGAATGTGAGAAAGTTACCGCAATAAAGACAGGGGAGGCAATGCTTTGTAAGCAAAGATGCTCAGAACTTTATACAGCAGATTTGGGCCTTTAGGGCTTTCAAAAGAATAAAGAATTATATGTCACTCAACTATTTGAGAAGAATTTCCTTTTTTTAGGTAGAAGAAAAAAAATAATTCTTTTTTTAGGTAGAAGAAAGAATAAATTTGCTATTGTAATTTGTAACAAATTTTGTTGAGAGATTATTCTAAAAGAGTGAGACGTGACCTTGCTCTGGCTGGTTCTTTTTCTCCACAAACGCTATCAAAACTGTGCATCTTGCTGGTTCTCTTAATACCGTGTAGTTTTAAATAATATCGTGTAGGTTTAAAGTTAGTTTTTATCAAGAAAAAAAATTAAATAATAACAATAATTTTCATGCAATAAAAGACCTTGGTGTAAAACACATTTATAAAATTTATAGAAAAAAGGTTAATGGAGATTTTTTTTAATAAAAAAATTAACAATAAATTTACTGTAGAAACCAATTTTAAGTTTTATTAAAAGTAAATAGACTAAAATTAGACATTTGAAAACATAAGAACTAAAATAAAACAAAATCCATAAAATACATGGACCATAATGATATTTTAACCATAATTTTAAAACATATGTTGCAGGTGTTTATTAAGTACATTTGCATTTTGTTAGTATCTAAATTTAAAAAAAAAAAAAAAAATGTCAACTTGCATAACTCAAGTGTGGTTGTATATACTTAACTTTTGAATTCTTCATCACAACTATTGTTGAATTAAAAAAATAATAATAGTAACATATTTGTGAACTTTATTTTGATTTTTTTTTTGTCTAATAAATTCATATCTAAATAGGTTGTTTAAATCTCTCATTGAAAAGATAAATGGAGACCTCACAATTTATAAGATATATGAGTTATATTACTCTGTTTTTCTTCTTACTCTCATGGTTTGTCAAAAAATTTGTCTCGTGTAATTTTTTTTTTTTTTTTGAAAGGATGTCTCGTGTAAATTTCAATAGGTGTTTATTAAGGTTTTTTTTTTTTGTCCAATAAAGCAAAGGTCTCTAAATGTAACTGAAATTAGCCTATCACATATCACATAACTTTTCTTTTCTTTTTTGACAATACATATCACATAACTTTTAAATGATTCCATCATATTCACATTTGACATGTCACGTAATTGAATTGACAAAGTTAAAGTAGTAAAGTAAAAAAAAATTATTAGAGGATGACAAAATTTTATACTTAACCTTAATTATTTATTTTTATGTATTAACCTTTGAATTCTACCCATTTTAAAAAGGGACAAATTAGTAGAAAAATTTTAATTATTCAATTATTATAGTTGTATTTCTTGAATTTAATTAAGACGACACAAAGATTCTTCATTAATCTTCACTTTATACCTTAATAAAATACAGGTAACTTAAACACAGCCTTAAAAAATTTAGGAACTTATTAAAAGTTGGACGTTGAACCAAAATTAAACAACCAAATTCATAATTTATTGTTTTTATTATTATTTTTTTTTCTTTTTGTTACTTAACTGTCTACAAATTATTAGTTAATTTTCTAAATATAAAACCGTGTCTCTCAAAAACTGCCTGTGCAGTTAACATAGAAGAAGAATACCTGGTCGAATTAGGGACGTGTTTGGCTCTTCTCCTAAAAACCAGTGGCGTAAAGAAGAAAATGGAGATGTGGGTATTGAAGGATTACCAGAAACAAAAGTGGGTTAAGGAAGAAAGTTTCCAATACGACATGTCGGATTCGGATGACGACTGTCGTCTGATTCCAGCTCGAGTTCCAGTTCCTTTGGGCACTGTAAACGAGGGCGATGGAGAGATTTTACTGTTCAAACCAATGGGAAAGTGGAGGAACTTGGACGGCTGCTGTACTACGACATGAAACGGCGGCGTTTTCATGGAGCTGAGATTGGTGGACTGTCTGAAGAATGGTTGTCGTCTAATGATGCTGGAGATTATAGTTTTGATGTTTACGAAGAGAATATTATGAGTTTGTCGTCTGTTTTGGGTGTTGGTTGACACTACCCTAAATATTGGTTTTCATGTTCTTTTTGTTTGTAATCTTCGAGCTACTTCTCAGTTTGGTTTGTCATATTTTTTAAATTATCAATTTTGTTATGTATTAAAAGTAAGTACGTATCCTTTTGAACTCAAATTGTTCAAATTCATAAATAGTTGACCTGTCATTAACTTCTTGTTGTTTTATATGGGATAAGGTAAATACAATTTTAGTCCATTAAACTTTAAGGGGGTGTTTGGGGTACTGAATAGGTTATAATAACCTCATTTATTATAACCAACAAGAACTTAGGCATTAAGTTGTACTAGTAACCACAAAGTTTGTGGTTCGAATCCACTTTCCCACATATTGTCAAAAAAAAAAAAAAAACACATTTATTATAACATATTCAGTGTTTGAGGAATTCAGCGCCTCAAACATTCCCTAAAAAGTAGGGGAATTGTGCTAAATGGCTACAAAAAAAAAGCATTCTTGATTTTTGGCTACGAAAGTTTGGATTTTGCAGGCATGACTACCGACATTTTAGGGAACTGTTTACTGGATTATTTTGGACGTTTTTACCCTTGTATTTACGGTTATTTACAGACGCCGTTTACGTCATTTTCGAGGACAGAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGTAAACTAATCCCTAAAATTTCGGGATTTTAGTATCTGTTTGTTGCAAATATAAGGGGAGGGAAACCAAACCGTTACCTATTTCATTTTTTTTTTGTACAGTCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCTGCGTGGTATGAGAGGTAGGTAGTGTTATTCACTCTGTTTGGCGGTGGGAAATGGTGTGGAATGGAGGGTTCAGGGGTGTGGAATGCTCTCAAATGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCTGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGGTTATTTACAGACTCCGTTTACGTCATTTCCTAGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAAGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGTAAACTAAATCCCTAAAATCTAGGGATTTTAGTATCTGTTTGTTGCAAATATAAGGGGAGGGAAACCAAACCGTTACCTATTTCAATTTTTTTGGTACAGTCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGACGGAGATGGTTCGTCGACGTGGTGTGAGAGGTAGGTAGTGATATTCAATCTGTTTGGCGGTGGGAAATGGTGTGGAATGGAGAGTTCGGGGGTGTGGAATGCTCTCAAGGGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGGTTATTTACAGACGTCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGCAGTATTTAATTGCAATTATTCATTCTGGTGGTGAGGGTGGGCGGTATCTTCTTTTTAGCTTATTCATTTTTGGGGGAAAATTAGTATGTCTTCCGGGTTGCTGGTGTTCTTATTTTTTTGGGTTTTTAATTGCTAATGTTCTTGGGTGCAGGTAGTATGTCTTCGGATTGAGAGGACATTTTTTCCAATCAATGCATCCTGAAGGTATTTCTCTCTACTGAGGGAGGCTGAACTTTGTTATCCTTCCCTAATAAAGGTATTGACTCCTTTTTTTCAGGTAGCAACCTTTTCTAGGGTGTAAATTTTTTCAGTAGTAACACCTACTACTAGTTTTGTTTTTCAAACTAGTTTTGTTTCTTGGATTTTTTATTTTTCAAACTTCCTAAAATGGCTCCAACTTTTTTTAGGGGTATATTTTATCTCTCCTAAACTCTGGTTTTGATTTTAAACGTTAAGAATACGATAGACAGTTTGTTGGGGGCATATTTGTCTTTTACAAATATGGATTTATTGATCATTAAATCGTTTAGCCATCTATTTAATTTTTAAACGTTTGTAGCTATATTTCAAGCCACCTATTTATTTTTAGCCATATTTCTTGTTGCCCCTAAAAAGTATCTAGTAGGTAACCAGTGCTGCCTGGTATTAAGGATACAAGGCCACTGGGCCATTCCAAGGAGGATACGGACGACATGGGCCAGCCCATTAACAGTGAGAAAAGAAATCTAGAATGTTCGACCAATGGAAAATGCATCAATATGACTATGGTTACAGTTTGTTATTCTTTCCTTTCTAACATTATATTGGTTCATCTGTCCTCCCTCTGTATTTTGTATTTCAACATTTGTTATTATTTTGGGAAATTCCCTAAATCCCTATATGTATAAATGTATCCTCCTTGATCCTGGTGAAATGAGAATTAAATTGAGTATTATCTCCCTAAAACCTCTCATTGATTTCAGAACTTTGATTCCTGAAACAAGAAATCAAATCGAGGAGGTCCCGGATGGATGGTCCATGACTCGGACGGTTCCCTCATATGCTTTGGGATGCATCAAATCAACAAAATATGGTCAATCAAGATATTGGAGGCGAAAACTATTCTTGAAGGTTTAAAGCAAATATTGGATACCTACAACTAGAATCGAAACCCCATCGAAGTTGAATCCGACGCCCTGGAAGTCGTGAACATCTTGGTCGGAACTTCGGAGGATCTTTCTGATGTGGAAGCTTATCACTAATGAGATGAGTGCCTTAGCTTCGAGATCTTTTGTCGTGGAAATTTCACCATTGTAGTCGTGTTTTGAACACAATTGTGCATTGTGTTGCAAGGGAAGCCACAAAATTTTCTTTTAGACTATGATCTATACCATAATGGGTCTTCTGCGCAGGGAAGGAGATGGAGATGTGTTTTTTGAGCTCCTAGTTTTCCCAATTGACTTTTCCCTCTTTTAATGAGGACGAGTGTAACTCTTTGTGATTATTAATGTATTTTCCTTAAATAATAATAATAATAATAATAATAATTAAAAAAAGAAAAAAAAAAACTAAAGTTCCATTTTGTTTTCAACGGAGTCATTGAACTTTTAAAATTGTAATATTTCTTTGAGCTTCCTATATTGTGTCAAATAACTTCTTGAATTTTCAATTTTGAATCTAATAGATCATTGACTTATGAACATGCTATTGTTGACAAAATTTGAACATACAACAAAATAACAAGTATCGAGATGATTATTTTTGTTGTAGGGATCTTAATATACATGTTTTGAAAGTTCATGCATACATGTTAAGCCAGCCCATTAATTATTTCCTCTCTTGTTTTGCTTTATTTTCGGCCCAATGTGTTTTAGGCCCATCTTATTTATTCCTTCTTCAACCCGTGTATTTTAGGGTTGCCTTTTATTCATTTTGGTTGTTATGCATGTGGTGGTTACAGCAGGATGAAGGAGAAGAAGATTCCAGAGGGCGAGCGTGA

mRNA sequence

ATGGAACTCCGCCACCTCCCACCCTCTCTTCCTCTCTCTCCGCCGCCACCACCGCCGTCCCACCTCCCTCTCCCACATCCTCATTTCCTCCGCCTCCCACCTCCTCTCCGCCCCCTCTCCCTCCGCCACCCCTCTCCTCCGACGACCCTCCTCCTCCCCTTCCCCGAACCCCGTCGCCCCATCGTGGCCAAACCCGCCAACGGCCTCCTCCTCCTCCACTTCCCCAACCACCTGTACTCCGACCGGCCCGACCTTCCGGCCGCCGTCTTCAACCCAGGCACCAGAGAGATGTTCTCTCTCCCCCAAAATGGGCACAACGATAATTATGAGCAGAAAGTTAAGGTGTTGTACTATTTTGGGTATGATTTTGTGGAGGGCGTGTACAAGGTGCTGCAGATTTGGAGGTTCATCGATACGAACCTTGAGAGGTCGGAGAGGTCATTGGCTTTTAAGATCGTGACGTTGGGGTCCGGTGAATGGAGATGGATTCGGCCGGATCTTCCGTTGTTTTGTAGCTCTTACTGTGCTTTGTTTTCTTCTTCGTGCGTCTGTAATGGCGGAATTCATTGGGTTGTTCGCCGGAAGAAGTGTGTGTTGGTGTTCGATTTGCATGATGAGCAGTTTCGTTTGATTCCGTTTCCTCAACTTTTCAACAACTACCACAACCACAACCAAGTTAACATAGAAGAAGAATACCTGGTCGAATTAGGGACGTGTTTGGCTCTTCTCCTAAAAACCAGTGGCGTAAAGAAGAAAATGGAGATGTGGGTATTGAAGGATTACCAGAAACAAAAGTGGGTTAAGGAAGAAAGTTTCCAATACGACATGTCGGATTCGGATGACGACTGTCGTCTGATTCCAGCTCGAGTTCCAGTTCCTTTGGGCACTGTAAACGAGGGCGATGGAGAGATTTTACTGTTCAAACCAATGGGAAAGTGGAGGAACTTGGACGGCTGCTACGCCGTTTACGTCATTTTCGAGGACAGAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGATCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCTGCGTGGTATGAGAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCTGGTGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAAGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGACGGAGATGGTTCGTCGACGTGGTGTGAGAGGGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGGTTATTTACAGACGTCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGCAGTATTTAATTGCAATTATTCATTCTGGTGGTGAGGGTGGGCGAACTTTGATTCCTGAAACAAGAAATCAAATCGAGGAGGTCCCGGATGGATGGTCCATGACTCGGACGGTTCCCTCATATGCTTTGGGATGCATCAAATCAACAAAATATGGTCAATCAAGATATTGGAGGCGAAAACTATTCTTGAAGCAGGATGAAGGAGAAGAAGATTCCAGAGGGCGAGCGTGA

Coding sequence (CDS)

ATGGAACTCCGCCACCTCCCACCCTCTCTTCCTCTCTCTCCGCCGCCACCACCGCCGTCCCACCTCCCTCTCCCACATCCTCATTTCCTCCGCCTCCCACCTCCTCTCCGCCCCCTCTCCCTCCGCCACCCCTCTCCTCCGACGACCCTCCTCCTCCCCTTCCCCGAACCCCGTCGCCCCATCGTGGCCAAACCCGCCAACGGCCTCCTCCTCCTCCACTTCCCCAACCACCTGTACTCCGACCGGCCCGACCTTCCGGCCGCCGTCTTCAACCCAGGCACCAGAGAGATGTTCTCTCTCCCCCAAAATGGGCACAACGATAATTATGAGCAGAAAGTTAAGGTGTTGTACTATTTTGGGTATGATTTTGTGGAGGGCGTGTACAAGGTGCTGCAGATTTGGAGGTTCATCGATACGAACCTTGAGAGGTCGGAGAGGTCATTGGCTTTTAAGATCGTGACGTTGGGGTCCGGTGAATGGAGATGGATTCGGCCGGATCTTCCGTTGTTTTGTAGCTCTTACTGTGCTTTGTTTTCTTCTTCGTGCGTCTGTAATGGCGGAATTCATTGGGTTGTTCGCCGGAAGAAGTGTGTGTTGGTGTTCGATTTGCATGATGAGCAGTTTCGTTTGATTCCGTTTCCTCAACTTTTCAACAACTACCACAACCACAACCAAGTTAACATAGAAGAAGAATACCTGGTCGAATTAGGGACGTGTTTGGCTCTTCTCCTAAAAACCAGTGGCGTAAAGAAGAAAATGGAGATGTGGGTATTGAAGGATTACCAGAAACAAAAGTGGGTTAAGGAAGAAAGTTTCCAATACGACATGTCGGATTCGGATGACGACTGTCGTCTGATTCCAGCTCGAGTTCCAGTTCCTTTGGGCACTGTAAACGAGGGCGATGGAGAGATTTTACTGTTCAAACCAATGGGAAAGTGGAGGAACTTGGACGGCTGCTACGCCGTTTACGTCATTTTCGAGGACAGAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGATCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCTGCGTGGTATGAGAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCTGGTGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAAGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGACGGAGATGGTTCGTCGACGTGGTGTGAGAGGGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGGTTATTTACAGACGTCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGCAGTATTTAATTGCAATTATTCATTCTGGTGGTGAGGGTGGGCGAACTTTGATTCCTGAAACAAGAAATCAAATCGAGGAGGTCCCGGATGGATGGTCCATGACTCGGACGGTTCCCTCATATGCTTTGGGATGCATCAAATCAACAAAATATGGTCAATCAAGATATTGGAGGCGAAAACTATTCTTGAAGCAGGATGAAGGAGAAGAAGATTCCAGAGGGCGAGCGTGA

Protein sequence

MELRHLPPSLPLSPPPPPPSHLPLPHPHFLRLPPPLRPLSLRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDLPAAVFNPGTREMFSLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSGEWRWIRPDLPLFCSSYCALFSSSCVCNGGIHWVVRRKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKKMEMWVLKDYQKQKWVKEESFQYDMSDSDDDCRLIPARVPVPLGTVNEGDGEILLFKPMGKWRNLDGCYAVYVIFEDRDVFWMVNEFQNGTYRGCCVVVDIPSVNTGIHPVGTVSKGSSRRGRNDRACKRWLSTRRMKVVGTAEMVRLRGMRGFLLLEEEDGRVGCCMKAILVDRDVFWMVNEFQNGTYKGCCVVVDIPSVNTGIHPVGTVSKGGEKRPSMQEMVVDAADEGRWHDGDGSSTWCERGVECSQGFLLLEEEDGRVGCCMKAIPVVRVGGDMTFLPLVFTVIYRRRLRHFRGQRCVLQYLIAIIHSGGEGGRTLIPETRNQIEEVPDGWSMTRTVPSYALGCIKSTKYGQSRYWRRKLFLKQDEGEEDSRGRA

Homology

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BLAST of Lag0029519 vs. NCBI nr
Match: XP_022146376.1 (F-box/kelch-repeat protein At4g19930-like [Momordica charantia])

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-64
Identity = 161/309 (52.10%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 1   MELRHLPPSLPLSPPPPPPSHLPLPHPHFLR--LPPPLRPLSLRH--------PSPPTTL 60
           MELRHLP SLPLSPP      L    P FL   L    +P S  H        P PP T 
Sbjct: 1   MELRHLPSSLPLSPP------LRRLRPRFLSHILISASQPNSSCHHLLSAALGPLPPLTH 60

Query: 61  LLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDLPAAVFNPGTREMFSLPQNGHNDNYE 120
           LL  P  R  +V KPANGLLLLHFPN LYSDRPDLPA +FN   R++  LP N   +   
Sbjct: 61  LLSLP-LRHSLVVKPANGLLLLHFPNDLYSDRPDLPAYIFNRRARDIIPLPPNAPTN--- 120

Query: 121 QKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSGEWRWIRP-DLPL 180
           QKVK+LY+ GYD +   YKVLQIWRFIDTNLE SE  + FK+++LGSG+WR IRP  +P 
Sbjct: 121 QKVKILYHLGYDALGDEYKVLQIWRFIDTNLEMSESGMVFKVLSLGSGKWRRIRPRRIPF 180

Query: 181 FCSSYCALFSSSCVCNGGIHWVVRRKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIE 240
           FCSSY ALFS  C  NGGIHWVV  KK VLVF+LHDE+F  IPFPQ F          I+
Sbjct: 181 FCSSYSALFSPCCASNGGIHWVVHPKKFVLVFNLHDEEFASIPFPQPF----------IQ 240

Query: 241 EEYLVELGTCLALLLKTSGVKKKMEMWVLKDYQKQKWV--KEESFQYDMSDSDDDCRLIP 297
           ++                     +EMWVLKDYQ   WV  KE +FQYDMS  DDD     
Sbjct: 241 QQ-------------------SPIEMWVLKDYQNHIWVQLKEATFQYDMSSEDDD--HCS 268

[Close]

BLAST of Lag0029519 vs. NCBI nr
Match: CAB4282633.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 123.2 bits (308), Expect = 7.8e-24
Identity = 94/268 (35.07%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 41  LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDL--PAAVFNPGTREMF 100
           L  P+PPT          R   A   NGL+ L+  + ++ +R D   P  + NP TRE  
Sbjct: 90  LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKVFPNRTDQNHPVRILNPCTRESI 149

Query: 101 SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
            LP   H+      + + ++FG+  +   YKVLQ+ RF   N    +RS  FKI  LG+ 
Sbjct: 150 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDRSFMFKIFKLGTS 209

Query: 161 EWRWIRPDL--PLFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
            WR I  DL    F    C     S   +G IHW+ V  +  + VFDL DE+FR IP P+
Sbjct: 210 SWRRIEVDLNDVPFDLLKCHFDRRSVCAHGAIHWMHVSTQNIIAVFDLEDERFRAIPLPE 269

Query: 221 LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
            + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 270 DY-NYGIHG-INNTLGDIVELDECLALIGDRHLMQQNMMELWILKDYENQVWVKETITFP 329

Query: 281 YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
           +   D            PVPL T++ G+
Sbjct: 330 FYWGD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. NCBI nr
Match: CAB4313168.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-23
Identity = 94/268 (35.07%), Postives = 132/268 (49.25%), Query Frame = 0


Query: 41  LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDL--PAAVFNPGTREMF 100
           L  P+PPT          R   A   NGL+ L+  + L+ +R D   P  + NP TRE  
Sbjct: 90  LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKLFPNRTDQNHPVRILNPCTRESI 149

Query: 101 SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
            LP   H+      + + ++FG+  +   YKVLQ+ RF   N    +RS  FKI  LG+ 
Sbjct: 150 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDRSFMFKIFKLGTS 209

Query: 161 EWRWIRPDL--PLFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
            WR I  DL    F    C     S   +G IHW+    +  + VFDL DE+FR IP P+
Sbjct: 210 SWRRIEVDLNDVPFDLLKCQFDRRSVCAHGAIHWMHASTQNIIAVFDLEDERFRAIPLPE 269

Query: 221 LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
            + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 270 DY-NYGIHG-INNTFGDIVELDGCLALIGDRHLMQQNMMELWILKDYENQVWVKETITFP 329

Query: 281 YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
           +   D            PVPL T++ G+
Sbjct: 330 FYWGD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. NCBI nr
Match: XP_008224764.1 (PREDICTED: putative F-box protein At1g19160 [Prunus mume])

HSP 1 Score: 122.5 bits (306), Expect = 1.3e-23
Identity = 93/268 (34.70%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 41  LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDL--PAAVFNPGTREMF 100
           L  P+PPT          R   A   NGL+ L+  + ++ +R D   P  + NP TRE  
Sbjct: 90  LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKVFPNRTDQNHPVRILNPCTRESI 149

Query: 101 SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
            LP   H+      + + ++FG+  +   YKVLQ+ RF   N    +RS+ FKI  LG+ 
Sbjct: 150 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDRSIMFKIFKLGTS 209

Query: 161 EWRWIRPDL--PLFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
            WR I  DL    F    C     S   +G IHW+    +  + VFDL DE+FR IP P+
Sbjct: 210 SWRRIEVDLNDVPFDLLKCQFDRRSVCAHGAIHWMHTSTQNIIAVFDLEDERFRAIPLPE 269

Query: 221 LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
            + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 270 DY-NYGIHG-INNTLGDIVELDGCLALIGDRHLMQQNMMELWILKDYENQVWVKETINFP 329

Query: 281 YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
           +   D            PVPL T++ G+
Sbjct: 330 FYWGD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. NCBI nr
Match: XP_004297911.1 (PREDICTED: putative F-box protein At3g52320 [Fragaria vesca subsp. vesca])

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-22
Identity = 88/257 (34.24%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 63  AKPANGLLLLHFPNH-LYSDRPDLPAAVFNPGTREMFSLPQNGHNDNYEQKVKVLYYFGY 122
           A+ ANGL+ LH  N+    D P  P  V NP T E  +LP   H+        V Y+FG+
Sbjct: 82  AQSANGLICLHLSNYGGVFDNPSYPVRVLNPTTLECITLP---HSSCIHPTSDVTYHFGF 141

Query: 123 DFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSGEWRWIRPDLPL-----FCSSYCA 182
           + +   YKVLQ+ R       + E S  +KI TLG+  WR I  DL +     F SS  +
Sbjct: 142 NPLADEYKVLQVQRLSC----KGEHSWVYKIFTLGASSWRRIEEDLDVDRLAPFDSSN-S 201

Query: 183 LFSSSCVCNGGIHWVVRRKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIEEEYLVEL 242
            F      +G ++W+ R    +L F+  DE+FR++P PQ    Y            LVE+
Sbjct: 202 YFCKGVYADGVMYWLTR--DVILTFEFGDEKFRVMPLPQCSRLYCRPK--------LVEV 261

Query: 243 GTCLALLLKTSGVK-KKMEMWVLKDYQKQKWVKEESFQYDMSDSDDDCRLIPARVPVPLG 302
             CL+++    G++ K+ME+W+LKDY+ Q WV E + +Y +           A   +PLG
Sbjct: 262 SGCLSII----GLQDKEMELWILKDYRNQVWVNENTQRYVVQPPK------RAEYLIPLG 308

Query: 303 TVNEGDGEILLFKPMGK 313
           T++   GE+LL   M K
Sbjct: 322 TIH--SGELLLRSHMRK 308

[Close]

BLAST of Lag0029519 vs. ExPASy Swiss-Prot
Match: Q9T0J4 (Putative F-box protein At4g38870 OS=Arabidopsis thaliana OX=3702 GN=At4g38870 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-07
Identity = 64/276 (23.19%), Postives = 118/276 (42.75%), Query Frame = 0


Query: 83  PDLPAAVFNPGTREMFSLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLE 142
           P     ++NP TR   +LP+         +  +  Y GYD ++G YKV+ I R +   + 
Sbjct: 166 PPSSLVIYNPCTRRSITLPKIKAG-----RRAINQYIGYDPLDGNYKVVCITRGMP--ML 225

Query: 143 RSERSLA--FKIVTLGS--GEWRWIRPDLPLFCSSYCALFSSSCVCNGGIHW-----VVR 202
           R+ R LA   +++TLG+    WR I   +P     +  +    C+ NG +++        
Sbjct: 226 RNRRGLAEEIQVLTLGTRDSSWRMIHDIIP----PHSPVSEELCI-NGVLYYRAFIGTKL 285

Query: 203 RKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIEEEYLVELGTCLALLL---KTSGVK 262
            +  ++ FD+  E+F LI  P  F ++            L +    LA++    KTSG+ 
Sbjct: 286 NESAIMSFDVRSEKFDLIKVPCNFRSFSK----------LAKYEGKLAVIFYEKKTSGI- 345

Query: 263 KKMEMWVLKDYQKQKWVKEESFQYDMSDSDDDCRLIPARVPVPLGTVNEGDGEILLFKPM 322
             + +W+L+D    +W K+     +++ S  + R++     +      + D   ++F P 
Sbjct: 346 --IGLWILEDASNGEWSKKTFALPNLAASSTNSRIL----KLQKFRTTDADTCEIIFTPS 405

Query: 323 GKWRNLDGCYAVYVIFEDRDVFWMVNEFQNGTYRGC 347
               +L    A+Y   ++  V   V E     Y  C
Sbjct: 406 YAHSSLSS--AIYCDLKENKVRKFVKEGWTENYLPC 410

[Close]

BLAST of Lag0029519 vs. ExPASy TrEMBL
Match: A0A6J1CZ64 (F-box/kelch-repeat protein At4g19930-like OS=Momordica charantia OX=3673 GN=LOC111015605 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-64
Identity = 161/309 (52.10%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 1   MELRHLPPSLPLSPPPPPPSHLPLPHPHFLR--LPPPLRPLSLRH--------PSPPTTL 60
           MELRHLP SLPLSPP      L    P FL   L    +P S  H        P PP T 
Sbjct: 1   MELRHLPSSLPLSPP------LRRLRPRFLSHILISASQPNSSCHHLLSAALGPLPPLTH 60

Query: 61  LLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDLPAAVFNPGTREMFSLPQNGHNDNYE 120
           LL  P  R  +V KPANGLLLLHFPN LYSDRPDLPA +FN   R++  LP N   +   
Sbjct: 61  LLSLP-LRHSLVVKPANGLLLLHFPNDLYSDRPDLPAYIFNRRARDIIPLPPNAPTN--- 120

Query: 121 QKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSGEWRWIRP-DLPL 180
           QKVK+LY+ GYD +   YKVLQIWRFIDTNLE SE  + FK+++LGSG+WR IRP  +P 
Sbjct: 121 QKVKILYHLGYDALGDEYKVLQIWRFIDTNLEMSESGMVFKVLSLGSGKWRRIRPRRIPF 180

Query: 181 FCSSYCALFSSSCVCNGGIHWVVRRKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIE 240
           FCSSY ALFS  C  NGGIHWVV  KK VLVF+LHDE+F  IPFPQ F          I+
Sbjct: 181 FCSSYSALFSPCCASNGGIHWVVHPKKFVLVFNLHDEEFASIPFPQPF----------IQ 240

Query: 241 EEYLVELGTCLALLLKTSGVKKKMEMWVLKDYQKQKWV--KEESFQYDMSDSDDDCRLIP 297
           ++                     +EMWVLKDYQ   WV  KE +FQYDMS  DDD     
Sbjct: 241 QQ-------------------SPIEMWVLKDYQNHIWVQLKEATFQYDMSSEDDD--HCS 268

[Close]

BLAST of Lag0029519 vs. ExPASy TrEMBL
Match: A0A6J5V326 (F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36193 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-24
Identity = 94/268 (35.07%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 41  LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDL--PAAVFNPGTREMF 100
           L  P+PPT          R   A   NGL+ L+  + ++ +R D   P  + NP TRE  
Sbjct: 90  LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKVFPNRTDQNHPVRILNPCTRESI 149

Query: 101 SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
            LP   H+      + + ++FG+  +   YKVLQ+ RF   N    +RS  FKI  LG+ 
Sbjct: 150 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDRSFMFKIFKLGTS 209

Query: 161 EWRWIRPDL--PLFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
            WR I  DL    F    C     S   +G IHW+ V  +  + VFDL DE+FR IP P+
Sbjct: 210 SWRRIEVDLNDVPFDLLKCHFDRRSVCAHGAIHWMHVSTQNIIAVFDLEDERFRAIPLPE 269

Query: 221 LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
            + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 270 DY-NYGIHG-INNTLGDIVELDECLALIGDRHLMQQNMMELWILKDYENQVWVKETITFP 329

Query: 281 YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
           +   D            PVPL T++ G+
Sbjct: 330 FYWGD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. ExPASy TrEMBL
Match: A0A6J5XPS8 (F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS35981 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-24
Identity = 94/268 (35.07%), Postives = 132/268 (49.25%), Query Frame = 0


Query: 41  LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPDL--PAAVFNPGTREMF 100
           L  P+PPT          R   A   NGL+ L+  + L+ +R D   P  + NP TRE  
Sbjct: 90  LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKLFPNRTDQNHPVRILNPCTRESI 149

Query: 101 SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
            LP   H+      + + ++FG+  +   YKVLQ+ RF   N    +RS  FKI  LG+ 
Sbjct: 150 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDRSFMFKIFKLGTS 209

Query: 161 EWRWIRPDL--PLFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
            WR I  DL    F    C     S   +G IHW+    +  + VFDL DE+FR IP P+
Sbjct: 210 SWRRIEVDLNDVPFDLLKCQFDRRSVCAHGAIHWMHASTQNIIAVFDLEDERFRAIPLPE 269

Query: 221 LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
            + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 270 DY-NYGIHG-INNTFGDIVELDGCLALIGDRHLMQQNMMELWILKDYENQVWVKETITFP 329

Query: 281 YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
           +   D            PVPL T++ G+
Sbjct: 330 FYWGD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. ExPASy TrEMBL
Match: A0A6P5RWG8 (putative F-box protein At1g19160 OS=Prunus avium OX=42229 GN=LOC110752766 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.1e-23
Identity = 92/265 (34.72%), Postives = 129/265 (48.68%), Query Frame = 0


Query: 44  PSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPD--LPAAVFNPGTREMFSLP 103
           P+PPT          R   A   NGL+ L+  N ++ +R D   P  + NP TRE   LP
Sbjct: 93  PTPPT------KNGERLYNALSVNGLVCLYLSNLVFPNRTDHNHPVRILNPCTRESIILP 152

Query: 104 QNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSGEWR 163
              H+      + + ++FG+  +   YKVLQ+ RF   N    + S  F+I  LG+  WR
Sbjct: 153 ---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFPPLN-SIEDMSFMFRIFKLGTSSWR 212

Query: 164 WIRPDLP--LFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQLFN 223
            I  DL    F    C     S   +G IHW+    +  + VFDL DE+FR IP P+ + 
Sbjct: 213 RIEVDLNDLPFDLLKCQFDRRSVCAHGAIHWMHTSTQNIIAVFDLEDERFRAIPLPEDY- 272

Query: 224 NYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQYDM 283
           NY  H   N    Y+VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F    
Sbjct: 273 NYGIHGIKN-TLGYIVELDGCLALMGDRHLMQQNMMELWILKDYENQVWVKETITFPIYW 332

Query: 284 SDSDDDCRLIPARVPVPLGTVNEGD 302
            D            PVPL T++ G+
Sbjct: 333 GD---------LGYPVPLYTIHTGE 336

[Close]

BLAST of Lag0029519 vs. ExPASy TrEMBL
Match: A0A314YC60 (ABC transporter A family member 2 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_26863 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.3e-23
Identity = 92/268 (34.33%), Postives = 131/268 (48.88%), Query Frame = 0


Query: 41   LRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDRPD--LPAAVFNPGTREMF 100
            L  P+PPT          R   A   NGL+ L+  + ++ +R D   P  + NP TRE  
Sbjct: 1066 LNLPTPPT------KNGERLYNALSVNGLVCLYLSDKVFPNRTDHNHPVRILNPCTRESI 1125

Query: 101  SLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLERSERSLAFKIVTLGSG 160
             LP   H+      + + ++FG+  +   YKVLQ+ RF   N    + S  FKI  LG+ 
Sbjct: 1126 ILP---HDSPAYSAIHLTHHFGFSPLTNEYKVLQVKRFQPLN-SIEDMSFMFKIFKLGTS 1185

Query: 161  EWRWIRPDLP--LFCSSYCALFSSSCVCNGGIHWV-VRRKKCVLVFDLHDEQFRLIPFPQ 220
             WR I  DL    F    C     S   +G IHW+    +  + VFDL DE+FR IP P+
Sbjct: 1186 SWRRIEVDLNDLPFDLLKCQFDRRSVCAHGAIHWMHASTQNIIAVFDLKDERFRAIPLPE 1245

Query: 221  LFNNYHNHNQVNIEEEYLVELGTCLALLLKTSGVKKK-MEMWVLKDYQKQKWVKEE-SFQ 280
             + NY  H  +N     +VEL  CLAL+     +++  ME+W+LKDY+ Q WVKE  +F 
Sbjct: 1246 DY-NYGIHG-INNTLGDIVELDGCLALIGDRHLMQQNMMELWILKDYENQVWVKETITFP 1305

Query: 281  YDMSDSDDDCRLIPARVPVPLGTVNEGD 302
            +   D            PVPL T++ G+
Sbjct: 1306 FYWGD---------LGYPVPLYTIHTGE 1312

[Close]

BLAST of Lag0029519 vs. TAIR 10
Match: AT1G53550.1 (F-box family protein )

HSP 1 Score: 59.7 bits (143), Expect = 9.8e-09
Identity = 58/214 (27.10%), Postives = 94/214 (43.93%), Query Frame = 0


Query: 62  VAKPANGLLLLHFPNHLYSDRPDLPAAVFNPGTREMFSLPQNGHNDNYEQKV--KVLYYF 121
           + +P +GL+        Y     L A + NP T E  +LP+    +   + +  KV Y F
Sbjct: 127 LCRPVHGLICSQHIEENY-----LFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSF 186

Query: 122 GYDFVEGVYKVLQIWRFIDTNLERS--ERSLAFKIVTLGSGEWRWIRPDLPLFCSSYCAL 181
           GYD ++  +KVL+I     T L R   E S  ++++TLG G   W        C  +  L
Sbjct: 187 GYDPIDKQFKVLRI-----TWLHRGSHEWSSEYQVLTLGFGNISWRNTQC---CVVHYLL 246

Query: 182 FSSSCVCNGGIHWVVR---RKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIEEEYLV 241
             S    NG +++  R   RK  ++ FD+  E+F      +      N +   I  +Y  
Sbjct: 247 EDSGICINGVLYYPARLDNRKYTIVCFDVMTEKFSFTSIDKDMTIMTNLSFSLI--DYKG 306

Query: 242 ELGTCLALLLKTSGVKKKMEMWVLKDYQKQKWVK 269
           +LG C+             E+WVL++ ++ KW K
Sbjct: 307 KLGACIC-------DHTLFELWVLENAEEHKWSK 318

[Close]

BLAST of Lag0029519 vs. TAIR 10
Match: AT4G38870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-08
Identity = 64/276 (23.19%), Postives = 118/276 (42.75%), Query Frame = 0


Query: 83  PDLPAAVFNPGTREMFSLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLE 142
           P     ++NP TR   +LP+         +  +  Y GYD ++G YKV+ I R +   + 
Sbjct: 166 PPSSLVIYNPCTRRSITLPKIKAG-----RRAINQYIGYDPLDGNYKVVCITRGMP--ML 225

Query: 143 RSERSLA--FKIVTLGS--GEWRWIRPDLPLFCSSYCALFSSSCVCNGGIHW-----VVR 202
           R+ R LA   +++TLG+    WR I   +P     +  +    C+ NG +++        
Sbjct: 226 RNRRGLAEEIQVLTLGTRDSSWRMIHDIIP----PHSPVSEELCI-NGVLYYRAFIGTKL 285

Query: 203 RKKCVLVFDLHDEQFRLIPFPQLFNNYHNHNQVNIEEEYLVELGTCLALLL---KTSGVK 262
            +  ++ FD+  E+F LI  P  F ++            L +    LA++    KTSG+ 
Sbjct: 286 NESAIMSFDVRSEKFDLIKVPCNFRSFSK----------LAKYEGKLAVIFYEKKTSGI- 345

Query: 263 KKMEMWVLKDYQKQKWVKEESFQYDMSDSDDDCRLIPARVPVPLGTVNEGDGEILLFKPM 322
             + +W+L+D    +W K+     +++ S  + R++     +      + D   ++F P 
Sbjct: 346 --IGLWILEDASNGEWSKKTFALPNLAASSTNSRIL----KLQKFRTTDADTCEIIFTPS 405

Query: 323 GKWRNLDGCYAVYVIFEDRDVFWMVNEFQNGTYRGC 347
               +L    A+Y   ++  V   V E     Y  C
Sbjct: 406 YAHSSLSS--AIYCDLKENKVRKFVKEGWTENYLPC 410

[Close]

BLAST of Lag0029519 vs. TAIR 10
Match: AT2G30380.1 (Plant protein of unknown function (DUF641) )

HSP 1 Score: 53.9 bits (128), Expect = 5.4e-07
Identity = 49/144 (34.03%), Postives = 62/144 (43.06%), Query Frame = 0


Query: 89  VFNPGTREMFSLP------QNGHNDNY---EQKVKVLYY-------FGYDFVEGVYKVLQ 148
           V NP T E    P           DN+   E    + YY       FG D V G YK+++
Sbjct: 328 VLNPCTGEFLRFPSGPNPVDTSRYDNHRVIEGASWLAYYPGYWAMGFGKDKVNGTYKIVR 387

Query: 149 IWRFIDTNLERSERSLAFKIVTLGSGEWRWIRPDLPLFCSSYCALFSSSCVCNGGIHW-- 208
           +  F DTN         F+I+ L  GEWR +   LP     Y      S   NG I+W  
Sbjct: 388 M--FYDTN--------QFEILDLTIGEWRTMPNPLPY----YVQPNHHSAFVNGSIYWYD 447

Query: 209 VVRRKKCVLVFDLHDEQFRLIPFP 215
           +V   K +L  DLH EQFR +P P
Sbjct: 448 LVTGYK-ILALDLHTEQFRDVPRP 456

[Close]

BLAST of Lag0029519 vs. TAIR 10
Match: AT5G15660.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 43.1 bits (100), Expect = 9.5e-04
Identity = 52/194 (26.80%), Postives = 83/194 (42.78%), Query Frame = 0


Query: 23  PLPHPHFLRLPPPLRPLSLRHPSPPTTLLLPFPEPRRPIVAKPANGLLLLHFPNHLYSDR 82
           P P  HF R        S+  PS  ++L  PF  PR        +     H  N L S  
Sbjct: 89  PNPKLHFFR-------PSISSPSFLSSLTCPFTYPR--------HEEYYYHHVNGLISVG 148

Query: 83  PDLPAAVFNPGTREMFSLPQNGHNDNYEQKVKVLYYFGYDFVEGVYKVLQIWRFIDTNLE 142
                 V NP T +  +LP+        ++  V+ +FGYD V   YKVL +   +  + E
Sbjct: 149 YGTDQIVINPTTGKFITLPR-----PKTRRKLVISFFGYDSVSDQYKVLCMTERLRGHPE 208

Query: 143 RSERSLAFKIVTLGSGEWRWIRPDLPLFCSSYCALFSSSCVC-NGGIHWVVRR-----KK 202
             E S   ++ TLG+ +  W      + CS     +S + VC NG ++++ +      ++
Sbjct: 209 --EASSQHQVYTLGAKQKSW----KMINCSIPHRPWSWNAVCINGVVYYIAKTGEGMFRR 256

Query: 203 CVLVFDLHDEQFRL 211
           C++ FDL  +   L
Sbjct: 269 CLMRFDLKSDNLDL 256

The following BLAST results are available for this feature:

BLAST of Lag0029519 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146376.1	4.5e-64	52.10	F-box/kelch-repeat protein At4g19930-like [Momordica charantia]	[more]
CAB4282633.1	7.8e-24	35.07	unnamed protein product [Prunus armeniaca]	[more]
CAB4313168.1	1.0e-23	35.07	unnamed protein product [Prunus armeniaca]	[more]
XP_008224764.1	1.3e-23	34.70	PREDICTED: putative F-box protein At1g19160 [Prunus mume]	[more]
XP_004297911.1	1.5e-22	34.24	PREDICTED: putative F-box protein At3g52320 [Fragaria vesca subsp. vesca]	[more]

BLAST of Lag0029519 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0J4	4.0e-07	23.19	Putative F-box protein At4g38870 OS=Arabidopsis thaliana OX=3702 GN=At4g38870 PE...	[more]

BLAST of Lag0029519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ64	2.2e-64	52.10	F-box/kelch-repeat protein At4g19930-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J5V326	3.8e-24	35.07	F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS3619...	[more]
A0A6J5XPS8	4.9e-24	35.07	F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3...	[more]
A0A6P5RWG8	7.1e-23	34.72	putative F-box protein At1g19160 OS=Prunus avium OX=42229 GN=LOC110752766 PE=4 S...	[more]
A0A314YC60	9.3e-23	34.33	ABC transporter A family member 2 OS=Prunus yedoensis var. nudiflora OX=2094558 ...	[more]

BLAST of Lag0029519 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53550.1	9.8e-09	27.10	F-box family protein	[more]
AT4G38870.1	2.9e-08	23.19	F-box and associated interaction domains-containing protein	[more]
AT2G30380.1	5.4e-07	34.03	Plant protein of unknown function (DUF641)	[more]
AT5G15660.1	9.5e-04	26.80	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 185..274 e-value: 1.2E-10 score: 41.4
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 88..275 e-value: 2.2E-25 score: 87.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31111:SF22	BNAA05G37150D PROTEIN	coord: 63..274
None	No IPR available	PANTHER	PTHR31111	BNAA05G37150D PROTEIN-RELATED	coord: 63..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029519.1	Lag0029519.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process