Lag0029358 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029358
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description15.7 kDa heat shock protein, peroxisomal
Locationchr8: 38151381 .. 38152837 (-)
RNA-Seq ExpressionLag0029358
SyntenyLag0029358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGGACGAAGAGAAGAAGTCTCTGGAGATCATTTCAAATTCCACAGACTTTCAGCTGCAATCTTCAATCTGTGCCTTTTGTGAAGCTTCGATCCCTTAGCTTGCTTCCAATGGCGGATGATTTATTTGGATATCCTCTCCGGCGTTTCTTCTGGAGCCCTGCCGTCTTCCGAGGACCGTCCGCCGCCGTTGCGCTCTTGGATTGGCTCGAAACATCCAATGCTCACATCTTCAAGGTTAACGTTCCAGGTACCTTTTCGTTATCGCTTGGCTTTGAATGCTGATTTACGCAATACGTTCCTTGATTTGAGGTATGAGAAATTTCTGTATGTAATGCCTCTGCGGAGTGGAGATTCTCTAGGTTTTGTGGATTGAGTTTCTTGTTTAATTAGTTTTTCTTGTCTAAGCTTCTTTTCTTTTGCTTGGATTCTTAAACTTGTTCGGTTCATTCGGAGTTATTTTAAGGAACTTATTCACTCGGTTCGGTTTGAGGAATCGTTGTATTGTTTCTACTTTAGATTTGATGCGAAATCAAGCAATTAGTTTAATGAGTTTGAGATTTGGAAAGTGTTTTTTGTCTTGGATAATTGAGTCGATCGTCGCCTTTGAAACTTTTTGAAAAGAATGAAAATTAAACACGGTTTAATTTTAGACAAACATGGTATTTAATTGAGTGTTTATGCATTTAGTTTCTTACCGTGGATTAAGATGTGGAGAATAGAATTGTAAGAAAGTGACAAACTGAATCGTATTTTTTTTTTAAAAGAAACTTTAACTGAATCGTATTTTGTGAAGTGACTGTCATTTGATTTGTTGATAAATTAATTATGGTGGACACAAAATACGTGGGGAAAAAATAATCTAAGTCCAGGGGAAACGAGTTCAAAACTATAGTGGTCAGTGGTCACCGGCCAAATGCCATCTATTTAGGATTTAAAATCTCATGAATTTTCTTAGCAACTACTAGCTGATTAGTCAAAGTGTATATGAGTAGTTCAAATATTCACGGATATCAACAATAAAATATTATATAGAAAAAAAATAAAAATCACTTTGTCTCTTCACAAAATACAAATTTAGGTCACTACTCTTAAATTCTCTCTGTTTTTTTCTTCCCAGGTTAGCTATTTGATAGATTATTTGGTTGTTGCTATTTGAAATCTGTTTAGGCTTTAGCAAAGATGACATAAAGGTACAGGTTGATGAGGGAAATGTTCTGCACATCAAAGGAAACAATAAAGAGGGACCTCTTGGGAAAGAGGCCATTTGGCATTTGGCTGAAAGACAAACAGGGAAGAGAGATTTTTCTAGGGAGATTGAACTGCCTGAAAATGTCAAATTAGACCAGATTAAAGCTCAGGTTGAAAATGGTCTCCTCACCATTGTTGTCCCAAAAGATACAGCTCCAAGGTCATCAAAGGTCAGGAACATCAACATTACGAGTAAGCTTTGA

mRNA sequence

ATGATAAGGACGAAGAGAAGAAGTCTCTGGAGATCATTTCAAATTCCACAGACTTTCAGCTGCAATCTTCAATCTGTGCCTTTTGTGAAGCTTCGATCCCTTAGCTTGCTTCCAATGGCGGATGATTTATTTGGATATCCTCTCCGGCGTTTCTTCTGGAGCCCTGCCGTCTTCCGAGGACCGTCCGCCGCCGTTGCGCTCTTGGATTGGCTCGAAACATCCAATGCTCACATCTTCAAGGTTAACGTTCCAGGCTTTAGCAAAGATGACATAAAGGTACAGGTTGATGAGGGAAATGTTCTGCACATCAAAGGAAACAATAAAGAGGGACCTCTTGGGAAAGAGGCCATTTGGCATTTGGCTGAAAGACAAACAGGGAAGAGAGATTTTTCTAGGGAGATTGAACTGCCTGAAAATGTCAAATTAGACCAGATTAAAGCTCAGGTTGAAAATGGTCTCCTCACCATTGTTGTCCCAAAAGATACAGCTCCAAGGTCATCAAAGGTCAGGAACATCAACATTACGAGTAAGCTTTGA

Coding sequence (CDS)

ATGATAAGGACGAAGAGAAGAAGTCTCTGGAGATCATTTCAAATTCCACAGACTTTCAGCTGCAATCTTCAATCTGTGCCTTTTGTGAAGCTTCGATCCCTTAGCTTGCTTCCAATGGCGGATGATTTATTTGGATATCCTCTCCGGCGTTTCTTCTGGAGCCCTGCCGTCTTCCGAGGACCGTCCGCCGCCGTTGCGCTCTTGGATTGGCTCGAAACATCCAATGCTCACATCTTCAAGGTTAACGTTCCAGGCTTTAGCAAAGATGACATAAAGGTACAGGTTGATGAGGGAAATGTTCTGCACATCAAAGGAAACAATAAAGAGGGACCTCTTGGGAAAGAGGCCATTTGGCATTTGGCTGAAAGACAAACAGGGAAGAGAGATTTTTCTAGGGAGATTGAACTGCCTGAAAATGTCAAATTAGACCAGATTAAAGCTCAGGTTGAAAATGGTCTCCTCACCATTGTTGTCCCAAAAGATACAGCTCCAAGGTCATCAAAGGTCAGGAACATCAACATTACGAGTAAGCTTTGA

Protein sequence

MIRTKRRSLWRSFQIPQTFSCNLQSVPFVKLRSLSLLPMADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEGNVLHIKGNNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIVVPKDTAPRSSKVRNINITSKL
Homology
BLAST of Lag0029358 vs. NCBI nr
Match: KAG6579046.1 (15.7 kDa heat shock protein, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016570.1 15.7 kDa heat shock protein, peroxisomal [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-60
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEG 98
           MA+DLFGYPLRRFFWSPAVFRGPS  +AL+DWLETSNAHIFKV+VPGFSKD+I VQVDE 
Sbjct: 1   MANDLFGYPLRRFFWSPAVFRGPSGTIALMDWLETSNAHIFKVDVPGFSKDEITVQVDEA 60

Query: 99  NVLHIKG-NNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIV 158
           NVLHI+G + KE   GKEAIWHLAERQTGKR FSREIELPENVKLD+IKAQVE+GLLTIV
Sbjct: 61  NVLHIQGTSGKEEAHGKEAIWHLAERQTGKRGFSREIELPENVKLDKIKAQVEDGLLTIV 120

Query: 159 VPKDTAPRSSKVRNINITSKL 179
           VP+DTAPR SKVRNINITSKL
Sbjct: 121 VPRDTAPRPSKVRNINITSKL 141

BLAST of Lag0029358 vs. NCBI nr
Match: XP_022141385.1 (15.7 kDa heat shock protein, peroxisomal [Momordica charantia] >XP_022141386.1 15.7 kDa heat shock protein, peroxisomal [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-60
Identity = 120/141 (85.11%), Postives = 128/141 (90.78%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEG 98
           MADD FGYPLRRFFWSPAVFR P  AVALLDWLETSNAH FKVNVPGFSKD+IKVQVDEG
Sbjct: 1   MADDFFGYPLRRFFWSPAVFREPFGAVALLDWLETSNAHTFKVNVPGFSKDEIKVQVDEG 60

Query: 99  NVLHIKGN-NKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIV 158
           N+LHIKG+  KE P+ K+ IWHLAERQ  KR+FSREIELPENVK+DQIKAQVENG+LTIV
Sbjct: 61  NILHIKGSRGKEEPVAKDTIWHLAERQREKREFSREIELPENVKVDQIKAQVENGVLTIV 120

Query: 159 VPKDTAPRSSKVRNINITSKL 179
           VPKDTA RSSKVRNINITSKL
Sbjct: 121 VPKDTATRSSKVRNINITSKL 141

BLAST of Lag0029358 vs. NCBI nr
Match: XP_022939289.1 (15.7 kDa heat shock protein, peroxisomal [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 7.2e-60
Identity = 120/141 (85.11%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEG 98
           MA+DLFGYPLRRFFWSP VFRGPS  +AL+DWLETSNAHIFKV+VPGFSKD+I VQVDE 
Sbjct: 1   MANDLFGYPLRRFFWSPPVFRGPSGTIALMDWLETSNAHIFKVDVPGFSKDEITVQVDEA 60

Query: 99  NVLHIKG-NNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIV 158
           NVLHI+G + KE   GKEAIWHLAERQTGKR FSREIELPENVKLD+IKAQVE+GLLTIV
Sbjct: 61  NVLHIQGTSGKEEAHGKEAIWHLAERQTGKRGFSREIELPENVKLDKIKAQVEDGLLTIV 120

Query: 159 VPKDTAPRSSKVRNINITSKL 179
           VPKDTAPR SKVRNINITSKL
Sbjct: 121 VPKDTAPRPSKVRNINITSKL 141

BLAST of Lag0029358 vs. NCBI nr
Match: XP_023550919.1 (15.7 kDa heat shock protein, peroxisomal [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 9.4e-60
Identity = 120/141 (85.11%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEG 98
           MA+DLFGYPLRRFFWSPAV RGPS  +AL+DWLETSNAHIFKV+VPGFSKD+I VQVDE 
Sbjct: 1   MANDLFGYPLRRFFWSPAVLRGPSGTIALMDWLETSNAHIFKVDVPGFSKDEITVQVDEA 60

Query: 99  NVLHIKG-NNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIV 158
           NVLHI+G + KE   GKEAIWHLAERQTGKR FSREIELPENVKLD+IKAQVE+GLLTIV
Sbjct: 61  NVLHIQGTSGKEEAHGKEAIWHLAERQTGKRGFSREIELPENVKLDKIKAQVEDGLLTIV 120

Query: 159 VPKDTAPRSSKVRNINITSKL 179
           VPKDTAPR SKVRNINITSKL
Sbjct: 121 VPKDTAPRPSKVRNINITSKL 141

BLAST of Lag0029358 vs. NCBI nr
Match: XP_022993441.1 (15.7 kDa heat shock protein, peroxisomal [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-59
Identity = 118/141 (83.69%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEG 98
           MA+DLFGYPLRRFFWSPAVFRGPS  +AL+DWLETSNAHIFKV+VPGFSKD+I VQV+E 
Sbjct: 1   MANDLFGYPLRRFFWSPAVFRGPSGTIALMDWLETSNAHIFKVDVPGFSKDEITVQVNEA 60

Query: 99  NVLHIKG-NNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIV 158
           NVLHI+G + KE   GK+AIWHLAERQTGKR FSRE+ELPENVKLD+IKAQVE+GLLTIV
Sbjct: 61  NVLHIQGTSGKEEAHGKDAIWHLAERQTGKRGFSRELELPENVKLDKIKAQVEDGLLTIV 120

Query: 159 VPKDTAPRSSKVRNINITSKL 179
           VPKDTAPR SKVRNINITSKL
Sbjct: 121 VPKDTAPRPSKVRNINITSKL 141

BLAST of Lag0029358 vs. ExPASy Swiss-Prot
Match: Q9FHQ3 (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=HSP15.7 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 81/144 (56.25%), Postives = 109/144 (75.69%), Query Frame = 0

Query: 39  MAD-DLFGYPLRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDE 98
           MAD  +F YP RR       F+  S + AL+DW+E++N+HIFK+NVPG++K+DIKVQ++E
Sbjct: 1   MADRGIFLYPFRR-------FQEWSRSTALIDWMESNNSHIFKINVPGYNKEDIKVQIEE 60

Query: 99  GNVLHIKGNNKEGPLGKEAIWHLAERQT---GKRDFSREIELPENVKLDQIKAQVENGLL 158
           GNVL I+G   +    +  +WH+AER+    G  +F R IELPENVK+DQ+KA VENG+L
Sbjct: 61  GNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 120

Query: 159 TIVVPKDTAPRSSKVRNINITSKL 179
           T+VVPKDT+ +SSKVRN+NITSKL
Sbjct: 121 TVVVPKDTSSKSSKVRNVNITSKL 137

BLAST of Lag0029358 vs. ExPASy Swiss-Prot
Match: Q652V8 (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 0

Query: 39  MADDLFGYPLRRFFWS---PAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIKVQV 98
           MAD  FG P RR  +    P  +   SA  A +DW+ET  +H+ ++NVPG  KDD+KVQV
Sbjct: 1   MADLFFGGPFRRILYGRPFPPDWASASATAA-MDWVETPTSHVLRINVPGLGKDDVKVQV 60

Query: 99  DEGNVLHIKG------NNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQV 158
           ++GNVL ++G        KE    K+ +WH+AER  G+ +F+RE+ LP  V+++QI+A V
Sbjct: 61  EDGNVLTVRGAAPHAAAEKEREREKDVVWHVAER--GRPEFAREVALPAEVRVEQIRASV 120

Query: 159 ENGLLTIVVPKDTAPRSSKVRNINITSKL 179
           +NG+LT+VVPK+ AP   + R I ++SKL
Sbjct: 121 DNGVLTVVVPKEPAPARPRTRPIAVSSKL 146

BLAST of Lag0029358 vs. ExPASy Swiss-Prot
Match: Q05832 (18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-23
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 0

Query: 35  SLLPMADDLFGYP--LRRFFWSPAVFRGPSAAVALLDWLETSNAHIFKVNVPGFSKDDIK 94
           SL  + D  FG P  L     S       + A A +DW ET  AH+FK ++PG  K+++K
Sbjct: 22  SLDEIWDPFFGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVK 81

Query: 95  VQVDEGNVLHIKGNNKEGPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENG 154
           V+V++GNVL I G        K   WH  ER +G+  F R+  LPEN K+DQ+KA +ENG
Sbjct: 82  VEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQ--FMRKFRLPENAKVDQVKAGMENG 141

Query: 155 LLTIVVPKDTAPRSSKVRNINI 175
           +LT+ VPK+ AP+  +V+ IN+
Sbjct: 142 VLTVTVPKNEAPK-PQVKAINV 160

BLAST of Lag0029358 vs. ExPASy Swiss-Prot
Match: Q9LNW0 (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 52/124 (41.94%), Postives = 87/124 (70.16%), Query Frame = 0

Query: 55  PAVFRGPSAAV--ALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEGNVLHIKGNNKEGPL 114
           P+   G ++A+  A +DW ET+ AH+FK ++PG  K+++KV++++ +VL I G       
Sbjct: 35  PSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKE 94

Query: 115 GKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIVVPK-DTAPRSSKVRN 174
            K+  WH  ER +G+  FSR+ +LPENVK+DQ+KA +ENG+LT+ VPK + A + ++V++
Sbjct: 95  EKQDTWHRVERSSGQ--FSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKS 154

Query: 175 INIT 176
           I+I+
Sbjct: 155 IDIS 156

BLAST of Lag0029358 vs. ExPASy Swiss-Prot
Match: Q84Q72 (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0

Query: 55  PAVFRGPSA-----AVALLDWLETSNAHIFKVNVPGFSKDDIKVQVDEGNVLHIKGNNKE 114
           P+  RG S+     A A +DW ET  AH+FK +VPG  K+++KV+V++GNVL I G   +
Sbjct: 38  PSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSK 97

Query: 115 GPLGKEAIWHLAERQTGKRDFSREIELPENVKLDQIKAQVENGLLTIVVPKDTAPRSSKV 174
               K   WH  ER +GK  F R   LPEN K +QIKA +ENG+LT+ VPK+  P+   V
Sbjct: 98  EQEEKTDKWHRVERSSGK--FLRRFRLPENTKPEQIKASMENGVLTVTVPKE-EPKKPDV 157

Query: 175 RNINIT 176
           ++I +T
Sbjct: 158 KSIQVT 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6579046.14.2e-6085.1115.7 kDa heat shock protein, peroxisomal, partial [Cucurbita argyrosperma subsp.... [more]
XP_022141385.14.2e-6085.1115.7 kDa heat shock protein, peroxisomal [Momordica charantia] >XP_022141386.1 1... [more]
XP_022939289.17.2e-6085.1115.7 kDa heat shock protein, peroxisomal [Cucurbita moschata][more]
XP_023550919.19.4e-6085.1115.7 kDa heat shock protein, peroxisomal [Cucurbita pepo subsp. pepo][more]
XP_022993441.12.7e-5983.6915.7 kDa heat shock protein, peroxisomal [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9FHQ31.6e-3856.2515.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=HSP1... [more]
Q652V81.8e-2944.9716.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica OX=3994... [more]
Q058323.3e-2342.2518.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1[more]
Q9LNW05.6e-2341.9417.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 P... [more]
Q84Q727.3e-2345.2418.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 38..175
e-value: 3.8E-32
score: 113.0
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 41..168
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 69..174
e-value: 5.2E-23
score: 81.1
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 59..175
score: 25.183424
NoneNo IPR availablePANTHERPTHR11527:SF14215.7 KDA HEAT SHOCK PROTEIN, PEROXISOMALcoord: 43..177
NoneNo IPR availableCDDcd06472ACD_ScHsp26_likecoord: 68..160
e-value: 2.44969E-40
score: 129.732
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 43..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029358.1Lag0029358.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051259 protein complex oligomerization
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009651 response to salt stress
molecular_function GO:0043621 protein self-association
molecular_function GO:0051082 unfolded protein binding