Lag0029180 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029180
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr8: 36135806 .. 36147215 (+)
RNA-Seq ExpressionLag0029180
SyntenyLag0029180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCGACTGTCCATGTAGATACAGTGTAATCTTGTCGAGAATCTTGGTTATGAGACGAAGCTTGAAGGCGTCTGTAAAGAAGATGATTGATGGTAGAACGATGGAAGAGTTTGTCTCAGAGGTTCGAATGATGGAGGAAGGGGAAGGGGTTCTCTCGCGAACGGTAAGTTGGAAGGGTTTGAAATGAGGGAGGGGAAAGGATTTTTTTTTGGAACGTGAGTGTGTTCCCAAGTGAGTAATTATGCCTTAGGGTTTTTTCCAAGAAGCTATCAATCCATAGGTTTGTTTGAAATTGTGTATCAATTTTTTCATTTTTTTTTTCTGATTATACTTTAATTATGATATTTTTGGTGTTCATCCCATATTTTAGGTGAATCTAGATTTTTTTCTGATTATACTTTAATTCTGATTATACTCTAATTTTCTTTGAATCTGGATTTTTTTTAATTGAAGTTGTTCTTCATTGTTATTGAATTTGGTAAGTTCTTCCATTTTTTCTTTTGATATACACTTTTAAATTTAAGTCCTCCTATTTTTTCTATCTTTTTTATTTCAAATCTCTTTGTTTTAAATTTAGGTTGTCAGATTTATATTCAATTTCATTTGAATTTCGATTAGTTTTGATTTGCTAGATGAATCCATGGGTAAGGAAGCCAGATTTGATTGTTTGAAATTGTGTATAATTTTTTCATATTTTTTTCTATTATACTTTCATTCTGATATTTTAGGTTTTCACCCCATATTTTAGGTGAATCTAGATTTTTTTTCTGATTATACTGTAATTCTGATTATACTTTAATTCTTCTTTGAATCTGGATTTTTTTTTAATTGAAGTTGTTCTTTCATTTTTTCTTTTGATATACACCGATTAAATTTAAGTCCACCTATTTTTTCTCTCTTCGTTTTAATTCAAATCTCTTGTTTTAAATTTAGGTTGTCAAATTTATATTCCATTTCATTTGAATTACTGTTAGTTTTGATTTGCTAGATGAATCAATGGGTAAGGAAGCTAGATTTTCTCCCTTATTTATAGTGTATTTGTTTTGTTTTATTTCCAGATTTCAGATTTGTTAAAGGGTATTTTCGTCCAATTTCATGCCAAAATAGTTTACTAAAAATAGGATTTGGCCATTTATCAAATTGGAAATACAATTGGTCATTTTTCAAATCAGCTATTTTTTTTTGGCCATTTATCTGGTTGCCCCTAATTTTATTGATGATGGAAACCTCACGTTCACTCCACGATACAAAAGCTCGATATCACATCTTTTATAACCCACGACCATATATAGTGTAACTAAAGCAGAGCATTGTTTTCTGCTTAACCAAAGGCCCATAAAACAAAACTTGTTTTAACAACAAAGGCCCAAATACAAAATGGCCCATAAATTCACTTTTACAGAATGTGGGATATAAAAAAATACAACAAATATAACTCACCTGATTAAAATAAATATAACTCATCTGGTTAAAATAAAAGTTCAAAATTTTCACTGCTTATACACTTGGACCCGAAAAGAAAGGACAATTATTTTTTTAGTACATCAACAATTAGGGATGAGGGTGGGGGTTGGAACCTCTGACCTCTTGATCGAGGGTAGATGTCAATTACTGCTGAACTAGGTTCGCTTTGGCGAAAAGAAAGGACAATTATTACATGGTCAAGATATTTATGTATGATTAATTTATGTGCCAACTTGACTTTATGCTTAAATGTAAAACATAAATGGAAAAAAAAAAAAAGAACTAAACATGATATTGATAACTAAACCTAACTTATTTGTTTTTATTTTATCACCATCAACTTTTTTATCACTTGGATTATTGGGTACGTTTTTTCTTAGTTTTAATAAGTTAAATTACAAGTTTAGTCGATGAACTTTGAGAGTTGTGTCTATTTGCTCCTTAAACTTTAAAAAGTGTTAAATAGATCTTCATGCTTTCAATTTTGTGTTCAATACATATCTGAACTTTAAATAGTATCTCATAGGTCATTACACTTTCACTTTGTGTTTGATAAATCCATCAAAACTTTCAATTTTGTGTTTAATAGGTCATTGACAATATTAGAAATAAAAAGTTAGAACTTGAATTATCTTGTGTGTTAGGGTTTAGGGTTTATGGGTGAAAAGAAAAGGAATTGGAAGGAGGAATGAGATGAAGATGGAGGAAGAAATGAACGGATTTTTTTTTTTTGTTGGGTTTATAATTTTTATTTTATTTTATAATTTAATGTTTAGGGTTTAGGGAGAGGAGATGATGATGAAGAAGGAGGAGAGATTGCCTCAAACTTGTTAAAACCTGGAATTTGCTATTTAGGAAGACCCAAGTTTATTTATTTATTTATTTTTTTTGAGTTCTAGGAAGACCCATATTTAGCTTAGTCAAATAACATGATCAAAAGTATATTTTTGCCTTTCTAAAAAAAACAAAGTATGCTTAATTTTGCCTTTTATTTATCCAATAGAGTTCAAAAGAAAACATTTTTGTTACAAAATTTTATTAAAGTTATAGGATAAAAATAAAAATATTTTTGTTGATAATTAGGTTCATACTCTTTTTCAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAAAAGAAAATTAGGTTCATACTATTTTGGTCCTTGACCTTTGAATATCAAATTTTAGTCCTTATATTTTTAGTAAATCTTAAGATTTGGTCTTTAAGAGTAAATTTTTACTAAACTTGATTTGATAATAGTAATTTCCATGCAGTAAAGAAAACTATGTGAATATGTTTCCAAAAGTTAAAAAGGAAAAGGTAATAGAGACTATATTCTCAAAAAAAAAAAAAAAAAAAAAAAGTAATAGAGACTAAATAGTTTTTAGAAATTTTAACAATAAACTAGTTGTAGGAACTAATTTTAAGCTATATAGACTAAAATTACACATTGAGATCAAAATTATATTTTAAACTAATAGTTATTCATATTTTAATTATTAATTAGTAATAATAATGAGAAAATTTATATTAAAAAATAATAAAGGAAAATTTGTAAATTAAGAAATTTTAAAGAAAAAGTGGCCCCTCAATTAAAATTTAAAGTTGAAATGTTTTGAAGAATAATAAGTGACCATGCTAACTTTTAAGTTTTAACTATAATTTTATCTTTTGTTTAAAAAAAAAAAAAACTATAAATTAAAGTTTAAAGGATAGACTGATTTGGAGTGGATATTTAATAACCTGTCGCAGTATTATTGATGGGTAATATGAAGAATTCTTCTGGATCTAGTTTGTGTTCTCGTTCAAGTCCGATTTCTTCTTTGATTTAACAAACAACCACAAGAATTTCGCACAGACTCCGAAATTAGAACAAATCACAACTTCATTTCATTACATGTTTGTAAATTGTGTACAAGAACAAAAAGGCAAACACATAATAAAATGCTCTGTTTTCTGTATGATGAAACAGAGCAAGACGTACCCAACAAAAAACAACAAGAAGATCAAAACCTCAATACAAACAAGTCATGGGTGTCGGGTTTCCGGCGAGGGACGAAAGAGAGATCTGACGAAATCCTTAATACAATGGTACATCATCGTCTTCACTAACTTCCTCCTCTTCGGAATCACAGATTTCATTTTCCCGCCGCCGGCTCTGCAGTGTGGAATGAGCAGCACTCGGAATTCCGTCGTCTTCTCCAAGTTTCTTCTCGCCGGAGTTACAGTGGCAACCGTCGGCGGACTCAGAATTGCGACGACGGTGGCCTGCAAGTGGATCGGATTGTTATGTGGGGTAATGATTGGATCCATGAGAATGTCACTGAATTTGTTTTCAGTTTGGGTTTCGCGGCGGTGCAAGGAAGGTTTTGTTGGGGGTTTATAGTTATAGATGTGTGAAAGCTTTTGATGGGAGCCACCATTGTCTGGATTCAGGTTTATGAGAAGCTTCTCGCCATCGATAAGTCAATACTCGACTTTCATTTATTAAAGTTGACATCTTTTGAAAGTCAAAATGTAACTTCCTTTAGCTTCGGAAGTATCTGTGAAAAAAATTCGATGAGAAGTTTGATCATCTAAATCATTAAATTTTGGAGAAAAATACACTTCTAGTCCTGAGGTTTGGGTTAGGTTTCATTTTAGTCCCTGAGTTTTCAAACTCAACAATTTAGTTCTGAGGTTTGGTTTTAGTTTCATTTTAGTCCCTCCATCCATTTTTCCGTTAAAAACTAACGATTTGCTGACGTGGTATTAATTTTTAATTTAAAAAAAATATTTTTGAATTTTTTAAAATATAAATATATTAAAAATAATAAAATATTATTATTTCATCTTTCACTTTCTCCTTCTTCTTCTCTACCAAAATCCTAAGCTTCCTTACCAAAACCCTAACCCTCCTGCCGCCGGCTGCCGAGGACCACCATCGACCGCCGATCGCCGGCAACCGGCCGGTCGCCGCCGACAATTTTTTTCTTCTTCTCTCTTTCTCTCCCTCACCGTCCCTCTCTTTCTCTCCCTCACCATTCCTCTCTCTCTCATTGTCCCTCTCACGCACACACACCCAAATCTCATCGGAATTTCGAGGCCGAGCTGCACCGTCACTCCCTCTCACGCACGCACGCCCAGATCTCGCTGGAATTTCAAGGCCGAGCTGCGCCGTAACTCCCTCTCACGCCCACCGTCACTCCCTCCCTATCTCACGCCCATATCTCACCGGTGTCTGGATTTTGACTACAGACTGGAACACGAACGGACGAGGACTCTGTTAGCCATTTTTCTTGTCGACACGAGGATTACAAACGGACTGGAACCAACGTGAATCGACTGTCGACGACTGTGTCCGAGGAAGAGAACGACGTTTCGTCTCTGAACAATACGATTTCTAGCATCAGTGGAGTTCAGCCTCGAAATTCCGATGAGATTCCGATGAGATTTGGGCGTGTGTGCGTGAGAGGGACAGTGAGAGAGAGAGGAATGGTGAGGGAGAGAAAGAGAGGGACGGTGAGGGAGAGAAAGAGAGAAGAAAAAATTGTCGCCGGCGACCGGATCGACGGTCGATGGTGGTCCTCAGCAGCCGACGGCAGGAGGGTTAGGGTTTTGGTAAGGAGGCTTAGGATTTTGGTAGAGAAGAAGAAGGAGAAAGTGAAAGATGAAATAATAATATTTTATTATTTTTAATATATTTATATTTAAAAAAAATTCAAAAATATTTTTTTTAATTAAAAAATAATACCACATCAGAAAACCGTTAGTTTTTAACGGAAAAATGGATGGAGGGACTAAAATGAAACTAAAACCAAACCTTAGGGACTAAACCTCAGGGAAAAATAACCAACTCCACCCCTTATTGTTGTTGATGCCCCTGGGTTGGTTATAATAGCCCCCACTATTATAACCAACACAGTGGACCTTACCGACAACTTTTCCGGCGACCAGCGTCGACTTTCTGGTCACTTTTCCGGCGATCACCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCTCTTCTCGTTTTCATTTCGAAAAATATAAAAATCGAAAATAAAAAAATAAAAATAAAAGGTAGAAGAAATGAAAGGAAAAAAGAGGGAAAAAAATTTAAGTCGCTGAAAAATTTGTTGGTGGATAGATTACGATTATTTAGAGTCTATCAGTGTCTATCGCGGATAAACTTTGGTTAATCAAAATCTATCCGTGACTATCACTGATAGGTTCTGATTAATCAAAGTCTATCAAGTGATAGTCACAGATAGATTTTGATTAATCGAAGTCTATCAGCGATAGACACTGATATACTTTGAATAATCAGAGTCTATTAGACACGGATGAAATCGGACAACAGTTTTTTGGTCTTGTAAAATTAATTTTGCTATATTTGCAATTAGTTTGCAACGGTGCTAAATTTGCTATTAATTTGGTCCAATTTGCCATCTATGCAACTGTCCATTTTTTTTTTATATATCATTGAGTGTCCGGGCCAGCTTACGCGCATCTCGACTAATCTCACGGCACATCCACCTGACCCTACTACATTTGGTTGCCAAGCAAACTTGTACGATATTAAATATCCTAGGTAGGTGGCCGATTGAACCCATTCCAAGTCCTTTATTTTTTCCATGACCCTTATTGGCCGTTAGGGCCAACCCATGATGGTTCATAAAATTTTCTAATTCCTCCAAAATTTTAAAATTTTGGGAAAGTTTTTCAAAATTTAACATAATTACTCATCCAAATTTCTAATAACTCACTCAACATTATTTTGGATCGATATAATTGTAAAATTTTTCACATAAGAGACTAAATTGAAACTTTTTAAAGGTTATGAACAAAACATTTGGAGTTGGCCTTTAATATATATATTAAATTTGTTGAAAGATTTTAAACTAAATTGAAGAATACAAATATGAAATGTATTTATGTATGATTGTACTGAGTTTGATGAAAATACCAAAAAGTCAAAAGGGAAAATATTGGTCGTGGCTTGGTGAACCTCTGACGCAATGCTAATTTTTGTAATGAACAAAAGGGTACGGTCATACTCGACCACGTTGACTAATCCACTCAAGGATGAAGCATATCCAACTCTCATTTATGCCTATTCTTCTAGCTTCCTTTGCAATAGAATCAGCTTACTATATTTTCCTTCCTAGGGACGTTTCTGTACACGTCTTCATTGAAATGAGTCTCTGATTCCCAGATTTCTTCCACCAAGGCTTCCACGTCACTCCAGGGAATTGACTTTTTTGGCACAAAACTTACAGCTTGGCTACAATCAGATTTCATCACCATTTTACCTCTAATTTTTAACTTCTTAATCAAGAACATGTATCAATTACTGTCAAATAATCATACTCACCTTGACTTATTAATGTGTTTGTTGGTTTTGGTGTTTTTGTTAGAAGATTACCTGGATAAACGGTTGCAAACCATCAAGCTTCAACGGTCTTCCAGCATATTTCTCCTTATATATTCTGTGTACCTAAAAAAAAAACAGTGAGTAAGATTTGAGAGTATTTTCAGTGAGGGATTGAGTGTATCTCTGTAATTCTGATTAAGAGCAAATTACTTACCTCCTTACAGTGGACGTAGGCCTTAGTTGCCGAACCACTTACATGCTTGTGTCGATTTCTTTCCCTTCTCTTCTTCTTCTTCTTGCTTAATCGTGAGTGAGACTGAGAGATCGCCATCTTCGTGTTCTATCGTCTTAGAGCTTCTGTTCTGGTTTGATCAAGTTTGAGGATTTGCATGATCTGGGAAAGTGCAAGAGTGAGTTAATTCACGTGGACAATTGAAGTATCTTACACGTGGAAATCACTAACAGTGGTATCAGAGCAAGGAAGATCAACCAAGAACTCAGATCTTGAAGCATTCAATGGCGTTGGCAAGATTTGATATAGAGAAATTTGATGGAAAGGGAGATTTCGACTTGTGGAAGGCCAAGATCAAGGCAATTCTTGGCCAACAGAAGGCACTTTACGCACTGGCAGACCCTGATAAACTGCCAGCAACCATCTCTGCCGAAGACAAAGAAAGCATGAACATGACTGCATATGGGACCATCATTCTGAACTTGAGTAACAATGTGTTGCGGCAAGTCATAGATGAGGAGACTCCATTAAAGATTTGGGCAAAGTTGAATAAACTCTATGAGACTAAGGATGCACATAATAAGATGTATCTTAGAGAGAAGTTCTTTACATTCAAGATGGATGCTGGAAAACCCCTATCTGAAAATCTGGATGAATTTAAGAAGATGACCTCAGAATTTAAGAATCTTGGAGAAAAGATTGGGGATGAGAATGAAGCCTTTGTCCTATTAAATTCACTTCCAGAAGCCTATAAAGATGTTAAAAATGCTTTGAAATATGGCAGGGAGAATATAACCACTGATGGGATAATCTCTGCTATTCGAACAAAGGAGCTTGAGCTTCTGTCAGTAAAGAAAGAGTCTTCAGAAGGACTCTTTGTGAAAGGGAAAGGAAAGAACAAGGAAACCAAAGGCCAATCCGAAGAAAAATCAAAGCCCAAGGTGAGATGTAATTACTGCCACAAGGAAGGGCACATCAAGCGAGAATGTTACTCATTGAAGCGGAAAAATCAGTACCATAAATCAAAGAAAAACAGACAATCTGAGGCTGCTGTGGGAGAAAACACTATCACTTACTCAGATGCATTAGCAACCTCAGACAAGAGTTGTACACAAAATGAAACAGCAGATAAATTTGACTGGGTGATAGATTCAGGATGCTCGTTTCACATGACTCCATCCAAGGGTTGGTTCAGCACTTATAAAGAATGGGATGGTGGAATTGTGTACATGGGAAACAACCATACCTGTCGGGTGGCAGGAATTGGATCAGTTTCTTTAAGGCTGAAGGATGGCTCAGTTATCTTGTTGAGGAATGTTCGACTTGTGCCTAACCTTAAAAGGAACTTGATTTCTTTAGGCATGTTGGACTCAATTGGATGCACATATGGAGGCAGCAGTGGTACTATTGAAATCAGAAGAGAATCTCGAGTTGTACTGACAGGAAACAAGATAAATGGCTTGTATGTTGTCAAGGATGTGCAGATGATGGAATCAGCTCTTGTAGTTTCATCGGATGGGCCTACTGAAAGTGACTTATGGCACAAAAGGCTTTCCCATATTAGCTCAAGAGGACTACAAGAATTGGCCAAACAAGGAATTCTTCCAACTGGAACAGGAAATGATCTGTCTTTTTGTGAGCAGTGTGTTATTGGAAAGGCAAAAAGACAGAACTTTTCTAAATCTCAACAAACAACAAAGGGTATTCTGGAATATGTGCATTCAGACCTATGGGGGCCAGCCTCTACAAACTCCCTGAGTAACTCAAGGTATTTCTTAACCTTCATAGACGATTACTCTAGAAAGAGTTGGGTTTATTTCCTAAAAACTAAAGACCAAGTATTTGAAAAATTCAAAGAATGGAAAGCACTAGTTGAGAAGCAAACCAACAAAGTTATTAAATGCCTAAGAACTGATAACGGTTTAGAATTTTGTAATGAGGAGTTTAATGCTTTCTGTAAGTCACAAGGGATACTTAGACACAGAACCGTGAGGTACACTCCTCAGCAAAATGGAGTGGCAGAAAGATTATACAGAACCATCATGGAAAGAGTTCGCTGCCAGTTATCAGATGCTATGTTGCCTGAACGATATTGGGCAGAAGCTGCTTCCTACACGGTATACACTCTAAACAGGTGTCCACATACTTCCTTGAATTTCCTAACTCCTGAAGAGAAATGGTCAGGGAAACCTCCAAAACTACAACACCTAAAGGTATTTGGATGTGTGAGTTTTGTCCATCAGAACCAAGGGAAATTGAAGGCCAGAGCCATAAAATGTATGTTCTTAGGCTTTACCGAGGGAGTTAAGGGATACAGATTATGGCATCCTGTGGAAAAGAAGTGTATAAACAGTCGTGATGTGTTTTTTAGGGAACAAGAGATGTATATGCTCCAAAAACAGTCAGTGGAGAAAGAATTGATAGAAAAAGAAACTCAGATTGAGGTGGAGCATGAATTACTTCCTTCAGATTCTGCTCTAGAACCAGAAACTTCACTAGAAAGAGGTGGAGGTTCAGAAGAAGGAGAAGAAGACACAGTTGAAGTATCTCAGGAAGTACAAGACCTTCAAAATTACTCTTTGGCGAGAGATAGACAAAGGAGACAAATAGTTCCACCAGCCAGGTTTAGTGAAGCCGACTGTATATCCATGGCTTTAAATGTGGCTGACTCCATAAGCAGTGAAGAGCCAAAGAATTTCGAAGAAGCAGTGAATGGTCCGAATGGGAGGCAATGGATCGAAGCCATGAATGAAGAGATGAGATCTTTAGAGGAAAATGATACTTGGACTCTAAAATCTCTACCTAATGGCTACAAACCGATTGCCTCCAAATGGATATACAAAATTAAGGAAGGAATCACAGGAATCCTTAAACCAAGGTTCAAAGCTCGGTTAGTAGCAAAGGGCTACACGCAAAGGGAAGGCATTGACTACTCAGAAATATTCTCACCTGTAGTCAAGATGACCTCCATCAGGATGCTGTTATCTATTGTGGTTCAAGAAGACCTAGAATTGGACCAATTAGATGTAAAAACAGCATTTCTTCATGGGTTCTTGTCAGAAAACATTTACATGACACAACCTCAGGGGTATGTGAGAAAGGGGCAAGAGAACCTGGTTTGTTACTTAAATAAGTCTATTTATGGGTTAAACAATCACCAAGGTGCTGGTATCAAAGGTTCAATGAAACTATCTCTAAGATTGGTTTCCAGAAAAGTTCCTTCGACAGTTGTGTGTATGTTAATACTAAGTCTTTTAAGAATGATGTCTTCCTTCTCCTATATGTTGACGATATGTTGCTAGCTGGAAAGGACAGAGAAGACATAAGCAAAGTCAAAACTCTTCTAAAAGAGAGTTTGACATGAAGGACTTGGGAGAGTCAAAGAAAATCCTTGGGTGGAGATAGTGAGAAACAGAAATGACTCCTCTCTTCACATTAACCAGACAAGTTATTGTGATAAGGTGCTAAAGAGGTTCAAACTATCCGAAGCAAAACAAGTTTCAACCCCTTGGCACACCACTTCAAATTGTCAGCAATGAACTCTCCAAAGGAAAATGAACTGGAACACCAAGCATTTATGTCCAAGATACCCTACTCCCAAGCCGTGGGAAGTCTAATGTATCTTATGGTATCCACGAGACCGGATCTTTCCTATGCTACAAGTCTAGTGAGCAGATATATGTCCAATCCGGGCAAAAGGCATTGGGAGGCCGTGAAATGGATACTAAGGTACTTGAAAGGGACATCAAATGCTACTCTACACTATAGGAAGAACAACCAGACTGAGAATGAGGTCTACGGGTATGTAGACTCAGATTTCGCAGGGGATTTAGACCGAAGAAGGTCCCTATCGGGCTATTTTTCCTACTTGGTCAGAACCTATTGAGCTGGAAAGCTACCTTGCAATCAGTAGTAGCTCTATCGACTACTGAAGCGGAATTCATAGCGTTGTCAGAGGCAATTAAGGAAGGAATATGGCTTAAGGGATTGTTGAATGACTTTGGGATAAAACAAACAACAGTGCGCATATACTGTGATAATCAAAGTACCATATTCCTAACTAAACATCCTCAATTCAACAACCGAACAAAGCACATAGATATTAAATATCATTTTGTGCGAGAGGAAATAGAAAAGGGAGAAGTTGAAGTCCTAAAGGTTCATACCTCTGACAACGCTGCCGATTTGTTAACCAAACCCCTTCCTCAACTGAAATTTCAGCATTGTTTGGAAATGGTAGGCTTTTGCTTACCGGAAAAGGGTGATAAAAGACAAATCAGAAAAGGAGGGAAGAATATTGCTCAGATCTTGATAGATTGCAAAGGTGGAGAATGTTAG

mRNA sequence

ATGTTCTTCGACTGTCCATGTAGATACAGTGTAATCTTGTCGAGAATCTTGGTTATGAGACGAAGCTTGAAGGCGTCTGTAAAGAAGATGATTGATGGTAGAACGATGGAAGAGTTTGTCTCAGAGGTTCGAATGATGGAGGAAGGGGAAGGGGTTCTCTCGCGAACGAGCAAGACGTACCCAACAAAAAACAACAAGAAGATCAAAACCTCAATACAAACAAGTCATGGGTGTCGGGTTTCCGGCGAGGGACGAAAGAGAGATCTGACGAAATCCTTAATACAATGGTACATCATCGTCTTCACTAACTTCCTCCTCTTCGGAATCACAGATTTCATTTTCCCGCCGCCGGCTCTGCAGTGTGGAATGAGCAGCACTCGGAATTCCGTCGTCTTCTCCAAGTTTCTTCTCGCCGGAGTTACAGTGGCAACCGTCGGCGGACTCAGAATTGCGACGACGGTGGCCTGCAAGTGGATCGGATTGTTATGTGGGACTGGAACACGAACGGACGAGGACTCTGTTAGCCATTTTTCTTGTCGACACGAGGATTACAAACGGACTGGAACCAACGTGAATCGACTGTCGACGACTGTGTCCGAGGAAGAGAACGACGTTTCGTCTCTGAACAATACGATTTCTAGCATCAGTGGAGTTCAGCCTCGAAATTCCGATGAGATTCCGATGAGATTTGGGCGTGTGTGCGTGAGAGGGACAGTGAGAGAGAGAGGAATGGTGAGGGAGAGAAAGAGAGGGACGGTGAGGGAGAGAAAGAGAGAAGAAAAAATTGTCGCCGGCGACCGGATCGACGGTCGATGGTGGTCCTCAGCAGCCGACGGCAGGAGGGTTAGGGTTTTGTGGTATCAGAGCAAGGAAGATCAACCAAGAACTCAGATCTTGAAGCATTCAATGGCGTTGGCAAGATTTGATATAGAGAAATTTGATGGAAAGGGAGATTTCGACTTGTGGAAGGCCAAGATCAAGGCAATTCTTGGCCAACAGAAGGCACTTTACGCACTGGCAGACCCTGATAAACTGCCAGCAACCATCTCTGCCGAAGACAAAGAAAGCATGAACATGACTGCATATGGGACCATCATTCTGAACTTGAGTAACAATGTGTTGCGGCAAGTCATAGATGAGGAGACTCCATTAAAGATTTGGGCAAAGTTGAATAAACTCTATGAGACTAAGGATGCACATAATAAGATGTATCTTAGAGAGAAGTTCTTTACATTCAAGATGGATGCTGGAAAACCCCTATCTGAAAATCTGGATGAATTTAAGAAGATGACCTCAGAATTTAAGAATCTTGGAGAAAAGATTGGGGATGAGAATGAAGCCTTTGTCCTATTAAATTCACTTCCAGAAGCCTATAAAGATGTTAAAAATGCTTTGAAATATGGCAGGGAGAATATAACCACTGATGGGATAATCTCTGCTATTCGAACAAAGGAGCTTGAGCTTCTGTCAGTAAAGAAAGAGTCTTCAGAAGGACTCTTTGTGAAAGGGAAAGGAAAGAACAAGGAAACCAAAGGCCAATCCGAAGAAAAATCAAAGCCCAAGGTGAGATGTAATTACTGCCACAAGGAAGGGCACATCAAGCGAGAATGTTACTCATTGAAGCGGAAAAATCAGTACCATAAATCAAAGAAAAACAGACAATCTGAGGCTGCTGTGGGAGAAAACACTATCACTTACTCAGATGCATTAGCAACCTCAGACAAGAGTTGTACACAAAATGAAACAGCAGATAAATTTGACTGGGTGATAGATTCAGGATGCTCGTTTCACATGACTCCATCCAAGGGTTGGTTCAGCACTTATAAAGAATGGGATGGTGGAATTGTGTACATGGGAAACAACCATACCTGTCGGGTGGCAGGAATTGGATCAGTTTCTTTAAGGCTGAAGGATGGCTCAGTTATCTTGTTGAGGAATGTTCGACTTGTGCCTAACCTTAAAAGGAACTTGATTTCTTTAGGCATGTTGGACTCAATTGGATGCACATATGGAGGCAGCAGTGGTACTATTGAAATCAGAAGAGAATCTCGAGTTGTACTGACAGGAAACAAGATAAATGGCTTGTATGTTGTCAAGGATGTGCAGATGATGGAATCAGCTCTTGTAGTTTCATCGGATGGGCCTACTGAAAGTGACTTATGGCACAAAAGGCTTTCCCATATTAGCTCAAGAGGACTACAAGAATTGGCCAAACAAGGAATTCTTCCAACTGGAACAGGAAATGATCTGTCTTTTTGTGAGCAGTGTGTTATTGGAAAGGCAAAAAGACAGAACTTTTCTAAATCTCAACAAACAACAAAGGGTATTCTGGAATATGTGCATTCAGACCTATGGGGGCCAGCCTCTACAAACTCCCTGAGTAACTCAAGGTATTTCTTAACCTTCATAGACGATTACTCTAGAAAGAGTTGGGTTTATTTCCTAAAAACTAAAGACCAAGTATTTGAAAAATTCAAAGAATGGAAAGCACTAGTTGAGAAGCAAACCAACAAAGTTATTAAATGCCTAAGAACTGATAACGGTTTAGAATTTTGTAATGAGGAGTTTAATGCTTTCTGTAAGTCACAAGGGATACTTAGACACAGAACCGTGAGGTACACTCCTCAGCAAAATGGAGTGGCAGAAAGATTATACAGAACCATCATGGAAAGAGTTCGCTGCCAGTTATCAGATGCTATGTTGCCTGAACGATATTGGGCAGAAGCTGCTTCCTACACGGTATACACTCTAAACAGGTGTCCACATACTTCCTTGAATTTCCTAACTCCTGAAGAGAAATGGTCAGGGAAACCTCCAAAACTACAACACCTAAAGGTATTTGGATGTGTGAGTTTTGTCCATCAGAACCAAGGGAAATTGAAGGCCAGAGCCATAAAATGTATGTTCTTAGGCTTTACCGAGGGAGTTAAGGGATACAGATTATGGCATCCTGTGGAAAAGAAGTGTATAAACAGTCGTGATGTGTTTTTTAGGGAACAAGAGATGTATATGCTCCAAAAACAGTCAGTGGAGAAAGAATTGATAGAAAAAGAAACTCAGATTGAGGTGGAGCATGAATTACTTCCTTCAGATTCTGCTCTAGAACCAGAAACTTCACTAGAAAGAGGTGGAGGTTCAGAAGAAGGAGAAGAAGACACAGTTGAAGTATCTCAGGAAGTACAAGACCTTCAAAATTACTCTTTGGCGAGAGATAGACAAAGGAGACAAATAGTTCCACCAGCCAGGTTTAGTGAAGCCGACTGTATATCCATGGCTTTAAATGTGGCTGACTCCATAAGCAGTGAAGAGCCAAAGAATTTCGAAGAAGCAGTGAATGGTCCGAATGGGAGGCAATGGATCGAAGCCATGAATGAAGAGATGAGATCTTTAGAGGAAAATGATACTTGGACTCTAAAATCTCTACCTAATGGCTACAAACCGATTGCCTCCAAATGGATATACAAAATTAAGGAAGGAATCACAGGAATCCTTAAACCAAGGTTCAAAGCTCGGTTAGTAGCAAAGGGCTACACGCAAAGGGAAGGCATTGACTACTCAGAAATATTCTCACCTGTAGTCAAGATGACCTCCATCAGGATGCTGTTATCTATTGTGGTTCAAGAAGACCTAGAATTGGACCAATTAGATGTAAAAACAGCATTTCTTCATGGGTTCTTGTCAGAAAACATTTACATGACACAACCTCAGGGGTATGTGAGAAAGGGGCAAGAGAACCTGGTTTGTTACTTAAATAAGTCTATTTATGGGTTAAACAATCACCAAGGTGCTGGTATCAAAGGTTCAATGAAACTATCTCTAAGATTGGTTTCCAGAAAAGTTCCTTCGACAGTTGTGTGTGCTAAAGAGGTTCAAACTATCCGAAGCAAAACAAGTTTCAACCCCTTGGCACACCACTTCAAATTGTCAGCAATGAACTCTCCAAAGGAAAATGAACTGGAACACCAAGCATTTATGTCCAAGATACCCTACTCCCAAGCCGTGGGAAGTCTAATGTATCTTATGGTATCCACGAGACCGGATCTTTCCTATGCTACAAGTCTAGTGAGCAGATATATGTCCAATCCGGGCAAAAGGCATTGGGAGGCCGTGAAATGGATACTAAGACTCAGATTTCGCAGGGGATTTAGACCGAAGAAGGTCCCTATCGGGCTATTTTTCCTACTTGGTCAGAACCTATTGAGCTGGAAAGCTACCTTGCAATCAGTAGTAGCTCTATCGACTACTGAAGCGGAATTCATAGCGTTGTCAGAGGCAATTAAGGAAGGAATATGGCTTAAGGGATTGTTGAATGACTTTGGGATAAAACAAACAACAGTGCGCATATACTGTGATAATCAAAGTACCATATTCCTAACTAAACATCCTCAATTCAACAACCGAACAAAGCACATAGATATTAAATATCATTTTGTGCGAGAGGAAATAGAAAAGGGAGAAGTTGAAGTCCTAAAGGTTCATACCTCTGACAACGCTGCCGATTTGTTAACCAAACCCCTTCCTCAACTGAAATTTCAGCATTGTTTGGAAATGGTAGGCTTTTGCTTACCGGAAAAGGGTGATAAAAGACAAATCAGAAAAGGAGGGAAGAATATTGCTCAGATCTTGATAGATTGCAAAGGTGGAGAATGTTAG

Coding sequence (CDS)

ATGTTCTTCGACTGTCCATGTAGATACAGTGTAATCTTGTCGAGAATCTTGGTTATGAGACGAAGCTTGAAGGCGTCTGTAAAGAAGATGATTGATGGTAGAACGATGGAAGAGTTTGTCTCAGAGGTTCGAATGATGGAGGAAGGGGAAGGGGTTCTCTCGCGAACGAGCAAGACGTACCCAACAAAAAACAACAAGAAGATCAAAACCTCAATACAAACAAGTCATGGGTGTCGGGTTTCCGGCGAGGGACGAAAGAGAGATCTGACGAAATCCTTAATACAATGGTACATCATCGTCTTCACTAACTTCCTCCTCTTCGGAATCACAGATTTCATTTTCCCGCCGCCGGCTCTGCAGTGTGGAATGAGCAGCACTCGGAATTCCGTCGTCTTCTCCAAGTTTCTTCTCGCCGGAGTTACAGTGGCAACCGTCGGCGGACTCAGAATTGCGACGACGGTGGCCTGCAAGTGGATCGGATTGTTATGTGGGACTGGAACACGAACGGACGAGGACTCTGTTAGCCATTTTTCTTGTCGACACGAGGATTACAAACGGACTGGAACCAACGTGAATCGACTGTCGACGACTGTGTCCGAGGAAGAGAACGACGTTTCGTCTCTGAACAATACGATTTCTAGCATCAGTGGAGTTCAGCCTCGAAATTCCGATGAGATTCCGATGAGATTTGGGCGTGTGTGCGTGAGAGGGACAGTGAGAGAGAGAGGAATGGTGAGGGAGAGAAAGAGAGGGACGGTGAGGGAGAGAAAGAGAGAAGAAAAAATTGTCGCCGGCGACCGGATCGACGGTCGATGGTGGTCCTCAGCAGCCGACGGCAGGAGGGTTAGGGTTTTGTGGTATCAGAGCAAGGAAGATCAACCAAGAACTCAGATCTTGAAGCATTCAATGGCGTTGGCAAGATTTGATATAGAGAAATTTGATGGAAAGGGAGATTTCGACTTGTGGAAGGCCAAGATCAAGGCAATTCTTGGCCAACAGAAGGCACTTTACGCACTGGCAGACCCTGATAAACTGCCAGCAACCATCTCTGCCGAAGACAAAGAAAGCATGAACATGACTGCATATGGGACCATCATTCTGAACTTGAGTAACAATGTGTTGCGGCAAGTCATAGATGAGGAGACTCCATTAAAGATTTGGGCAAAGTTGAATAAACTCTATGAGACTAAGGATGCACATAATAAGATGTATCTTAGAGAGAAGTTCTTTACATTCAAGATGGATGCTGGAAAACCCCTATCTGAAAATCTGGATGAATTTAAGAAGATGACCTCAGAATTTAAGAATCTTGGAGAAAAGATTGGGGATGAGAATGAAGCCTTTGTCCTATTAAATTCACTTCCAGAAGCCTATAAAGATGTTAAAAATGCTTTGAAATATGGCAGGGAGAATATAACCACTGATGGGATAATCTCTGCTATTCGAACAAAGGAGCTTGAGCTTCTGTCAGTAAAGAAAGAGTCTTCAGAAGGACTCTTTGTGAAAGGGAAAGGAAAGAACAAGGAAACCAAAGGCCAATCCGAAGAAAAATCAAAGCCCAAGGTGAGATGTAATTACTGCCACAAGGAAGGGCACATCAAGCGAGAATGTTACTCATTGAAGCGGAAAAATCAGTACCATAAATCAAAGAAAAACAGACAATCTGAGGCTGCTGTGGGAGAAAACACTATCACTTACTCAGATGCATTAGCAACCTCAGACAAGAGTTGTACACAAAATGAAACAGCAGATAAATTTGACTGGGTGATAGATTCAGGATGCTCGTTTCACATGACTCCATCCAAGGGTTGGTTCAGCACTTATAAAGAATGGGATGGTGGAATTGTGTACATGGGAAACAACCATACCTGTCGGGTGGCAGGAATTGGATCAGTTTCTTTAAGGCTGAAGGATGGCTCAGTTATCTTGTTGAGGAATGTTCGACTTGTGCCTAACCTTAAAAGGAACTTGATTTCTTTAGGCATGTTGGACTCAATTGGATGCACATATGGAGGCAGCAGTGGTACTATTGAAATCAGAAGAGAATCTCGAGTTGTACTGACAGGAAACAAGATAAATGGCTTGTATGTTGTCAAGGATGTGCAGATGATGGAATCAGCTCTTGTAGTTTCATCGGATGGGCCTACTGAAAGTGACTTATGGCACAAAAGGCTTTCCCATATTAGCTCAAGAGGACTACAAGAATTGGCCAAACAAGGAATTCTTCCAACTGGAACAGGAAATGATCTGTCTTTTTGTGAGCAGTGTGTTATTGGAAAGGCAAAAAGACAGAACTTTTCTAAATCTCAACAAACAACAAAGGGTATTCTGGAATATGTGCATTCAGACCTATGGGGGCCAGCCTCTACAAACTCCCTGAGTAACTCAAGGTATTTCTTAACCTTCATAGACGATTACTCTAGAAAGAGTTGGGTTTATTTCCTAAAAACTAAAGACCAAGTATTTGAAAAATTCAAAGAATGGAAAGCACTAGTTGAGAAGCAAACCAACAAAGTTATTAAATGCCTAAGAACTGATAACGGTTTAGAATTTTGTAATGAGGAGTTTAATGCTTTCTGTAAGTCACAAGGGATACTTAGACACAGAACCGTGAGGTACACTCCTCAGCAAAATGGAGTGGCAGAAAGATTATACAGAACCATCATGGAAAGAGTTCGCTGCCAGTTATCAGATGCTATGTTGCCTGAACGATATTGGGCAGAAGCTGCTTCCTACACGGTATACACTCTAAACAGGTGTCCACATACTTCCTTGAATTTCCTAACTCCTGAAGAGAAATGGTCAGGGAAACCTCCAAAACTACAACACCTAAAGGTATTTGGATGTGTGAGTTTTGTCCATCAGAACCAAGGGAAATTGAAGGCCAGAGCCATAAAATGTATGTTCTTAGGCTTTACCGAGGGAGTTAAGGGATACAGATTATGGCATCCTGTGGAAAAGAAGTGTATAAACAGTCGTGATGTGTTTTTTAGGGAACAAGAGATGTATATGCTCCAAAAACAGTCAGTGGAGAAAGAATTGATAGAAAAAGAAACTCAGATTGAGGTGGAGCATGAATTACTTCCTTCAGATTCTGCTCTAGAACCAGAAACTTCACTAGAAAGAGGTGGAGGTTCAGAAGAAGGAGAAGAAGACACAGTTGAAGTATCTCAGGAAGTACAAGACCTTCAAAATTACTCTTTGGCGAGAGATAGACAAAGGAGACAAATAGTTCCACCAGCCAGGTTTAGTGAAGCCGACTGTATATCCATGGCTTTAAATGTGGCTGACTCCATAAGCAGTGAAGAGCCAAAGAATTTCGAAGAAGCAGTGAATGGTCCGAATGGGAGGCAATGGATCGAAGCCATGAATGAAGAGATGAGATCTTTAGAGGAAAATGATACTTGGACTCTAAAATCTCTACCTAATGGCTACAAACCGATTGCCTCCAAATGGATATACAAAATTAAGGAAGGAATCACAGGAATCCTTAAACCAAGGTTCAAAGCTCGGTTAGTAGCAAAGGGCTACACGCAAAGGGAAGGCATTGACTACTCAGAAATATTCTCACCTGTAGTCAAGATGACCTCCATCAGGATGCTGTTATCTATTGTGGTTCAAGAAGACCTAGAATTGGACCAATTAGATGTAAAAACAGCATTTCTTCATGGGTTCTTGTCAGAAAACATTTACATGACACAACCTCAGGGGTATGTGAGAAAGGGGCAAGAGAACCTGGTTTGTTACTTAAATAAGTCTATTTATGGGTTAAACAATCACCAAGGTGCTGGTATCAAAGGTTCAATGAAACTATCTCTAAGATTGGTTTCCAGAAAAGTTCCTTCGACAGTTGTGTGTGCTAAAGAGGTTCAAACTATCCGAAGCAAAACAAGTTTCAACCCCTTGGCACACCACTTCAAATTGTCAGCAATGAACTCTCCAAAGGAAAATGAACTGGAACACCAAGCATTTATGTCCAAGATACCCTACTCCCAAGCCGTGGGAAGTCTAATGTATCTTATGGTATCCACGAGACCGGATCTTTCCTATGCTACAAGTCTAGTGAGCAGATATATGTCCAATCCGGGCAAAAGGCATTGGGAGGCCGTGAAATGGATACTAAGACTCAGATTTCGCAGGGGATTTAGACCGAAGAAGGTCCCTATCGGGCTATTTTTCCTACTTGGTCAGAACCTATTGAGCTGGAAAGCTACCTTGCAATCAGTAGTAGCTCTATCGACTACTGAAGCGGAATTCATAGCGTTGTCAGAGGCAATTAAGGAAGGAATATGGCTTAAGGGATTGTTGAATGACTTTGGGATAAAACAAACAACAGTGCGCATATACTGTGATAATCAAAGTACCATATTCCTAACTAAACATCCTCAATTCAACAACCGAACAAAGCACATAGATATTAAATATCATTTTGTGCGAGAGGAAATAGAAAAGGGAGAAGTTGAAGTCCTAAAGGTTCATACCTCTGACAACGCTGCCGATTTGTTAACCAAACCCCTTCCTCAACTGAAATTTCAGCATTGTTTGGAAATGGTAGGCTTTTGCTTACCGGAAAAGGGTGATAAAAGACAAATCAGAAAAGGAGGGAAGAATATTGCTCAGATCTTGATAGATTGCAAAGGTGGAGAATGTTAG

Protein sequence

MFFDCPCRYSVILSRILVMRRSLKASVKKMIDGRTMEEFVSEVRMMEEGEGVLSRTSKTYPTKNNKKIKTSIQTSHGCRVSGEGRKRDLTKSLIQWYIIVFTNFLLFGITDFIFPPPALQCGMSSTRNSVVFSKFLLAGVTVATVGGLRIATTVACKWIGLLCGTGTRTDEDSVSHFSCRHEDYKRTGTNVNRLSTTVSEEENDVSSLNNTISSISGVQPRNSDEIPMRFGRVCVRGTVRERGMVRERKRGTVRERKREEKIVAGDRIDGRWWSSAADGRRVRVLWYQSKEDQPRTQILKHSMALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAYGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIRTKELELLSVKKESSEGLFVKGKGKNKETKGQSEEKSKPKVRCNYCHKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVRLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESALVVSSDGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKFKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLYRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLKVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEKKCINSRDVFFREQEMYMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQDLQNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQENLVCYLNKSIYGLNNHQGAGIKGSMKLSLRLVSRKVPSTVVCAKEVQTIRSKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILRLRFRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLNDFGIKQTTVRIYCDNQSTIFLTKHPQFNNRTKHIDIKYHFVREEIEKGEVEVLKVHTSDNAADLLTKPLPQLKFQHCLEMVGFCLPEKGDKRQIRKGGKNIAQILIDCKGGEC
Homology
[Close]
BLAST of Lag0029180 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1036.9 bits (2680), Expect = 1.7e-298
Identity = 598/1356 (44.10%), Postives = 811/1356 (59.81%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            MA  RF++ KF+G GDF LW+ KI+AIL Q K    L D ++LP  I+  +K  M+  AY
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKIL-DEERLPDNITESEKRDMDEMAY 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
             TI+L LS+ VLR V +  T  ++W KL  LY TK   NK+Y++EKFF +KMD  K L E
Sbjct: 61   STILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEE 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
            NLDEF+K+  +  N+GEK+ DEN+A +LLNSLPE Y++VK A+KYGR+++T   ++ A++
Sbjct: 121  NLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALK 180

Query: 483  TKELELLSVKKESSEG--LFVKGKGKNKETKGQS---EEKSKPKVR-CNYCHKEGHIKRE 542
            T+ LE   +KKE  +G  L  +G+ + K  KG+      KSK K R C  CHKEGH K+ 
Sbjct: 181  TRNLE---IKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKN 240

Query: 543  CYSLKRKNQYHKSKKNRQSEAAV--GENTITYSDALATSDKSCTQNETAD---------K 602
            C         +KS++   SEA V  G N+   +D     D + T  E+A+         +
Sbjct: 241  C-------PLNKSREASTSEANVTDGYNSAEITDGY---DSAETGYESAEVLMVSHRDIQ 300

Query: 603  FDWVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLR 662
              W++DSGC+FHMTP + + + +++ DGG V +G+N TC V G GSV +   DG V +L 
Sbjct: 301  DAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT 360

Query: 663  NVRLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMME 722
            NVR VP LKRNLISLG LD  GCT    +G +++ + S V L G   +GLYV++   +  
Sbjct: 361  NVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSG 420

Query: 723  SALVVSSDGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQN 782
            SA + S      S LWHKRL+H+S RGLQ L++QG+L      +L FCE C++GK+ R  
Sbjct: 421  SAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVK 480

Query: 783  FSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKF 842
            F K + TTKGIL+YVHSDLWGP    S+  SRYF++ IDD+SRK W+Y LK KD+ F KF
Sbjct: 481  FGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKF 540

Query: 843  KEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLY 902
             EWK  VE QT + +K LRTDNGLEF N +FN FCKS+GI RH TV YTPQQNG+AER  
Sbjct: 541  LEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFN 600

Query: 903  RTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLK 962
            RTIMER RC L++A LP ++W EAA    Y +NR P T+LN  TP+E W+GK P L+HL+
Sbjct: 601  RTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLR 660

Query: 963  VFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEK---KCINSRDVFFREQEM 1022
            VFGC ++ H   GKL  RA+KCMF+G+ +GVKGY+LW  +EK   KCI SRDV F E EM
Sbjct: 661  VFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLW-CIEKGMNKCIISRDVTFNETEM 720

Query: 1023 -YMLQKQSVEKELIEKETQIEVEHELLPS---------DSALEPETSLERGGGSEEGEE- 1082
             Y +++Q  ++      T++ +  E+ PS          S +E     E  G   + E  
Sbjct: 721  PYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERI 780

Query: 1083 -----DTVEVSQEVQDLQNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKN 1142
                   +E S    DLQNY L RDR +R+   P R+  AD ++ AL  A      EP  
Sbjct: 781  LIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLT 840

Query: 1143 FEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKP 1202
            FEEA+   + +QW +AM EE+ SL +N TW+L   P   K I SKWIYKIK G  G  KP
Sbjct: 841  FEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKP 900

Query: 1203 RFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFL 1262
            R+KARLVAKGYTQ+EG+D+ EIFSPVV+ +SIR++LSI V  D+ ++Q+DV TAFLHG L
Sbjct: 901  RYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGEL 960

Query: 1263 SENIYMTQPQGYVRKGQENLVCYLNKSIYGL----------------------------- 1322
             E IYM QP+GY  KG+E++VC L+KS+YGL                             
Sbjct: 961  EEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1020

Query: 1323 ---NNHQGAGI----------------------------------KGSMK--LSLRLVSR 1382
                + +G  I                                   G +K  L + +   
Sbjct: 1021 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1080

Query: 1383 KVPSTVVCAKEVQTIR---------SKTSFNPLAHHFKLSAMNSP--KENELEHQAFMSK 1442
            K    +  ++E   I+         SK    PLA HF+LS+   P  K+  +E    MS 
Sbjct: 1081 KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIE----MSN 1140

Query: 1443 IPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR---------LRF 1502
            IPY  AVGS+MYLM+ TRPDL YA S++SR+MSNPGK HW+AVKW+LR         L +
Sbjct: 1141 IPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCY 1200

Query: 1503 RR---------GFR---------PKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFI 1517
             R         GF           ++   G  F L  N++SWK  LQ VVALSTTE+E+I
Sbjct: 1201 SRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYI 1260

[Close]
BLAST of Lag0029180 vs. NCBI nr
Match: PNX96445.1 (copia LTR rider [Trifolium pratense])

HSP 1 Score: 998.8 bits (2581), Expect = 5.1e-287
Identity = 566/1341 (42.21%), Postives = 781/1341 (58.24%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            M   +++IEKF G  DF LW+ K+KA+L QQ  L AL     + A ++A +K +M   A+
Sbjct: 1    MPSTKYEIEKFTGVNDFGLWRLKMKALLVQQGCLEALKGEAAMNAELTAAEKTNMIEKAH 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
              I+L+L + VLRQV  E T   +WAKL  LY TK   N++YL++  ++FKM   K L+E
Sbjct: 61   SAILLSLGDKVLRQVSKETTASGLWAKLESLYMTKSLVNRLYLKQALYSFKMVEDKVLAE 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
             LD F K+  + +N+  KI DE++A +LL +LP ++   K  L YGRE++T + + SA+ 
Sbjct: 121  QLDMFNKLILDLENIDVKIDDEDQALLLLCALPRSHAHFKETLLYGRESLTFEEVQSALY 180

Query: 483  TKELELLSVKKESS--EGLFVKGKGKNK----ETKGQSEEKSKPK----VRCNYCHKEGH 542
            +K+L      K S+  EGL VKGK   K    + KG+S+ KS       +RC +C KEGH
Sbjct: 181  SKDLNERKEHKPSTVGEGLAVKGKFLRKNGKFDKKGKSQSKSYSDEVSGIRCYHCKKEGH 240

Query: 543  IKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDWVIDS 602
             ++ C     + + H    N    AA+ ++    SD L  S           + +W++DS
Sbjct: 241  TRKVC---PERLKDHGGNGN----AAIVQDDFESSDVLVVSSSD-------SRKEWIMDS 300

Query: 603  GCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVRLVPN 662
            GC++HMTP+K  F    + DGG V +GNN  C++AG+GSV  +L D S+ LL  VR VP+
Sbjct: 301  GCTWHMTPNKDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLHDESIRLLTEVRYVPD 360

Query: 663  LKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESALVVSS 722
            LKRNL+SLG  D  G  + G    + + + S+ VL G K  GLY ++   +  S  VVS+
Sbjct: 361  LKRNLLSLGEFDKKGYVFQGEKSILRVMKGSKEVLRGVKKQGLYTLEAEVVSGSTNVVST 420

Query: 723  DGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQT 782
               +++++WH RL H+S RGL EL KQ +L       L FCE CV GK+ R  F+K +Q 
Sbjct: 421  KPLSKTEIWHMRLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKFNKGKQR 480

Query: 783  TKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKFKEWKALV 842
            T G L+Y+H+DLWGPA   S S +RYFL+ +DDYSRK WV+  KTKD+ FE FK WK LV
Sbjct: 481  THGSLDYIHADLWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLV 540

Query: 843  EKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLYRTIMERV 902
            E QT + +K LRTDNGLEFCNE F+ FC + GI RHRT   TPQQNG+AER  RTI+ERV
Sbjct: 541  ENQTGRKVKRLRTDNGLEFCNEAFDIFCAASGIARHRTTAGTPQQNGLAERFNRTILERV 600

Query: 903  RCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLKVFGCVSF 962
            RC L+ A L + +WAEA S   Y +NRCP T+L+  TPEE WSG PP L  L+VFGCV++
Sbjct: 601  RCMLTSAGLKKVFWAEAVSTATYLINRCPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAY 660

Query: 963  VHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEMYMLQKQSV 1022
             H  Q K++ RA+KCMF+G+ EGVK YRLW   P  K+CI SRDV F E EM   +   V
Sbjct: 661  AHIRQDKVEPRALKCMFMGYPEGVKAYRLWCLEPGHKRCITSRDVVFNEAEMAFKKTVDV 720

Query: 1023 -------EKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQDL 1082
                   ++EL + E  +EVEH     D+ L     +E        E +  E  +E  D 
Sbjct: 721  GRSTETSDEELEQVEIPVEVEH----VDAELHIPDEVEE-------EAENAEEVEETDD- 780

Query: 1083 QNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWIEAM 1142
             +Y L+RDR RR I  P R   AD I+ AL  A  +  EEP++++E +   N  +W++AM
Sbjct: 781  -DYLLSRDRSRRVIKAPQRLGYADLIAYALISASEVLDEEPRDYKEVMRSRNKTEWLKAM 840

Query: 1143 NEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQREGI 1202
            ++EM+SL +N TW L   P G + ++ KWI+K+KEGI G+   R+KARLVA+G+TQ+EG+
Sbjct: 841  DDEMKSLHDNHTWELIKKPAGARLVSCKWIFKVKEGIEGVTSKRYKARLVARGFTQKEGV 900

Query: 1203 DYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQ 1262
            D++++FSPVVK  SIRMLL++V Q DLEL+Q+DVKTAFL+G L E I M QP+GYV +G+
Sbjct: 901  DFNDVFSPVVKHRSIRMLLAMVAQFDLELEQMDVKTAFLYGDLDETILMRQPEGYVERGK 960

Query: 1263 ENLVCYLNKSIYGL---------------------------------------------- 1322
            E+ VC L +S+YGL                                              
Sbjct: 961  EDYVCKLKRSLYGLKQSPRQWNRRFDKFMARISFIRSQFDHCVYFRFRPGNSFVILLLYV 1020

Query: 1323 --------NNHQGAGIKGSMKLSLRL-------------VSRKVPSTVVCAKEVQTIR-- 1382
                    N      +K  +     +             + R    + +C  +   +R  
Sbjct: 1021 DDILIASNNVEDVTRVKAELNKEFDMKDLGAASRILGIDIRRDRKKSKLCLSQEAYLRKI 1080

Query: 1383 --------SKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVSTRP 1442
                    SK    P    FKLS    P  +    +A+M+ IPY+  VGSLMY MV TRP
Sbjct: 1081 LEKFGMSNSKPVVTPTNPQFKLSIDQCPSTD--VERAYMNSIPYANIVGSLMYAMVCTRP 1140

Query: 1443 DLSYATSLVSRYMSNPGKRHWEAVKWILRL-----------------------------R 1502
            D++YA SLVSRYM+NPGK HW+A+KWILR                               
Sbjct: 1141 DIAYAVSLVSRYMANPGKAHWQALKWILRYINGSLNRVLIYGGALGEDSKAVIEGYVDSD 1200

Query: 1503 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1519
            +      +K   G  F +    +SWKATLQ VVALSTTEAE+IAL+EA+KE +WL+G   
Sbjct: 1201 YAGCMDSRKSISGYVFTMFGTAISWKATLQKVVALSTTEAEYIALTEAVKEALWLEGFAK 1260

[Close]
BLAST of Lag0029180 vs. NCBI nr
Match: PPR84446.1 (hypothetical protein GOBAR_AA36262 [Gossypium barbadense])

HSP 1 Score: 998.0 bits (2579), Expect = 8.8e-287
Identity = 568/1342 (42.32%), Postives = 794/1342 (59.17%), Query Frame = 0 

Query: 295  RTQILKHSMALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDK 354
            R QI+  S++  ++D+EKF GK  F LW+ K++A+L QQ  L AL+  DKLP+T+S E K
Sbjct: 517  RFQIMATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQK 576

Query: 355  ESMNMTAYGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKM 414
            + M   A+  I+L L + VLR+V DE+T   +W +L   Y TK   N++YL+++ +  KM
Sbjct: 577  DDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKM 636

Query: 415  DAGKPLSENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITT 474
            + G P+S++LD+F  +  +  N+  KI DE++A ++L SLP +Y++  + + YGR+++T 
Sbjct: 637  EEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTL 696

Query: 475  DGIISAIRTKELEL----LSVKKESSEGLFVKGKGKNK---ETKGQSEEKSKPKVRCNYC 534
            + + +A+ + EL        V+    EGL  +G+ K K    +K     +SK +++C YC
Sbjct: 697  EEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYC 756

Query: 535  HKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFD 594
             K GH+K +C   K K++  + ++N ++  A  +++      LA SD             
Sbjct: 757  KKYGHMKVDCPKRKEKSE-SQEQQNDRANVADADSSSDAEIVLAVSDSYAGGR------- 816

Query: 595  WVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNV 654
            W++D+G +FH++ SK  FSTY++  G ++ MGN+H C+V GIG+V +++ DG V  L +V
Sbjct: 817  WILDTGATFHISTSKDAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDV 876

Query: 655  RLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESA 714
            R +P +K+NLISL  LD  G  Y    G +++   +  V+ GN   GLY + D   +   
Sbjct: 877  RHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFL-DGSSVTGV 936

Query: 715  LVVSSDGPTESD---LWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQ 774
              VSS    +SD   LWH RL H+S RGL  L+K+G+L       L+FCE CV GK  R 
Sbjct: 937  AGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRV 996

Query: 775  NFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEK 834
             FS     TKG ++Y HSDLWGP+ T S    RY LTFIDDYSRK WVYFLK+K +V   
Sbjct: 997  KFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLIN 1056

Query: 835  FKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERL 894
            FK++KAL+E QT K IK  RTDNGLEFC+ EFN FCK++GI+RHRTVR TPQQNGVAER+
Sbjct: 1057 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1116

Query: 895  YRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHL 954
             RT++ER RC  S+A L E +WAEA +   Y +NR P T++   TPEE WSG P     L
Sbjct: 1117 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGL 1176

Query: 955  KVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEM 1014
            +VFGC ++ H N+GKLK RA KC+FLG+ +GVKGYRLW   PV  K I SRDV F E  M
Sbjct: 1177 RVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSM 1236

Query: 1015 YMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQD 1074
                  S EKE  ++     VE ++       + +  +   G S + ++  V+ S E + 
Sbjct: 1237 LRSTTNSREKEESDRMGDHGVEKQV-----ECQVDAPIPTEGTSVQDDQVEVQDSDEDES 1296

Query: 1075 LQN--YSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWI 1134
             Q   YS+A  R +RQI P  R+  A+ +S AL+VA+SI   EP ++ EAV      QW 
Sbjct: 1297 PQEKPYSIATGRTKRQIKPNPRY--ANLVSFALSVAESIGI-EPSSYNEAVTCDESAQWA 1356

Query: 1135 EAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQR 1194
             AM+EE+ SL +N TW L   P+  K +  KW++K KEGI G+   RFKARLVAKG+TQ+
Sbjct: 1357 IAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQK 1416

Query: 1195 EGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVR 1254
            EGIDY+E+FSPVVK +SIR+LL++V + DLEL+QLDVKTAFLHG L E IYM QP+G+  
Sbjct: 1417 EGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTV 1476

Query: 1255 KGQENLVCYLNKSIYGLNNHQGAGIKGSMKLSLR-----------LVSRK---------- 1314
             G+E+ VC L KS+YGL        K      ++           +  RK          
Sbjct: 1477 PGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLL 1536

Query: 1315 --VPSTVVCAKEVQTI-------------------------------------------- 1374
              V   ++ +K +  I                                            
Sbjct: 1537 LYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYI 1596

Query: 1375 ----------RSKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVS 1434
                      ++KT   PLA HFKLSA  SP+ +E + Q  MS IPYS AVGS+MY MV 
Sbjct: 1597 EKVLQRFGMDKAKTVSTPLAPHFKLSAELSPQSDEEKQQ--MSHIPYSSAVGSVMYAMVC 1656

Query: 1435 TRPDLSYATSLVSRYMSNPGKRHWEAVKWILR-LR------------------------- 1494
            TRPD+S+A S+VSRYMS PGK HW+AVKWILR LR                         
Sbjct: 1657 TRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSD 1716

Query: 1495 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1520
            +      ++   G  F      +SWKA LQS VALSTTEAE++AL+EA+KE +W+KGL++
Sbjct: 1717 YAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVS 1776

[Close]
BLAST of Lag0029180 vs. NCBI nr
Match: PPS20553.1 (hypothetical protein GOBAR_AA00016 [Gossypium barbadense])

HSP 1 Score: 995.3 bits (2572), Expect = 5.7e-286
Identity = 567/1341 (42.28%), Postives = 793/1341 (59.13%), Query Frame = 0 

Query: 295  RTQILKHSMALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDK 354
            R QI+  S++  ++D+EKF GK  F LW+ K++A+L QQ  L AL+  DKLP+T+S E K
Sbjct: 496  RFQIMATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQK 555

Query: 355  ESMNMTAYGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKM 414
            + M   A+  I+L L + VLR+V DE+T   +W +L   Y TK   N++YL+++ +  KM
Sbjct: 556  DDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKM 615

Query: 415  DAGKPLSENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITT 474
            + G P+S++LD+F  +  +  N+  KI DE++A ++L SLP +Y++  + + YGR+++T 
Sbjct: 616  EEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTL 675

Query: 475  DGIISAIRTKELEL----LSVKKESSEGLFVKGKGKNK---ETKGQSEEKSKPKVRCNYC 534
            + + +A+ + EL        V+    EGL  +G+ K K    +K     +SK +++C YC
Sbjct: 676  EEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYC 735

Query: 535  HKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFD 594
             K GH+K +C   K K++  + ++N ++  A  +++      LA SD             
Sbjct: 736  KKYGHMKVDCPKRKEKSE-SQEQQNDRANVADADSSSDAEIVLAVSDSYAGGR------- 795

Query: 595  WVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNV 654
            W++D+G +FH++ SK  FSTY++  G ++ MGN+H C+V GIG+V +++ DG V  L +V
Sbjct: 796  WILDTGATFHISTSKDAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDV 855

Query: 655  RLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESA 714
            R +P +K+NLISL  LD  G  Y    G +++   +  V+ GN   GLY + D   +   
Sbjct: 856  RHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFL-DGSSVTGV 915

Query: 715  LVVSSDGPTESD---LWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQ 774
              VSS    +SD   LWH RL H+S RGL  L+K+G+L       L+FCE CV GK  R 
Sbjct: 916  AGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRV 975

Query: 775  NFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEK 834
             FS     TKG ++Y HSDLWGP+ T S    RY LTFIDDYSRK WVYFLK+K +V   
Sbjct: 976  KFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLIN 1035

Query: 835  FKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERL 894
            FK++KAL+E QT K IK  RTDNGLEFC+ EFN FCK++GI+RHRTVR TPQQNGVAER+
Sbjct: 1036 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1095

Query: 895  YRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHL 954
             RT++ER RC  S+A L E +WAEA +   Y +NR P T++   TPEE WSG P     L
Sbjct: 1096 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGL 1155

Query: 955  KVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEM 1014
            +VFGC ++ H N+GKLK RA KC+FLG+ +GVKGYRLW   PV  K I SRDV F E  M
Sbjct: 1156 RVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSM 1215

Query: 1015 YMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQD 1074
                  S EKE  ++     VE ++       + +  +   G S + ++  V+ S E + 
Sbjct: 1216 LRSTTNSREKEESDRMGDHGVEKQV-----ECQVDAPIPTEGTSVQDDQVEVQDSDEDES 1275

Query: 1075 LQN--YSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWI 1134
             Q   YS+A  R +RQI P  R+  A+ +S AL+VA+SI   EP ++ EAV      QW 
Sbjct: 1276 PQEKPYSIATGRTKRQIKPNPRY--ANLVSFALSVAESIGI-EPSSYNEAVTCDESAQWA 1335

Query: 1135 EAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQR 1194
             AM+EE+ SL +N TW L   P+  K +  KW++K KEGI G+   RFKARLVAKG+TQ+
Sbjct: 1336 IAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQK 1395

Query: 1195 EGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVR 1254
            EGIDY+E+FSPVVK +SIR+LL++V + DLEL+QLDVKTAFLHG L E IYM QP+G+  
Sbjct: 1396 EGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTV 1455

Query: 1255 KGQENLVCYLNKSIYGLNNHQGAGIKGSMKLSLR-----------LVSRK---------- 1314
             G+E+ VC L KS+YGL        K      ++           +  RK          
Sbjct: 1456 PGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLL 1515

Query: 1315 --VPSTVVCAKEVQTI-------------------------------------------- 1374
              V   ++ +K +  I                                            
Sbjct: 1516 LYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYI 1575

Query: 1375 ----------RSKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVS 1434
                      ++KT   PLA HFKLSA  SP+ +E + Q  MS IPYS AVGS+MY MV 
Sbjct: 1576 EKVLQRFGMDKAKTVSTPLAPHFKLSAELSPQSDEEKQQ--MSHIPYSSAVGSVMYAMVC 1635

Query: 1435 TRPDLSYATSLVSRYMSNPGKRHWEAVKWILR-LR------------------------- 1494
            TRPD+S+A S+VSRYMS PGK HW+AVKWILR LR                         
Sbjct: 1636 TRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSD 1695

Query: 1495 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1519
            +      ++   G  F      +SWKA LQS VALSTTEAE++AL+EA+KE +W+KGL++
Sbjct: 1696 YAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVS 1755

[Close]
BLAST of Lag0029180 vs. NCBI nr
Match: KAG8484780.1 (hypothetical protein CXB51_021428 [Gossypium anomalum])

HSP 1 Score: 986.9 bits (2550), Expect = 2.0e-283
Identity = 562/1346 (41.75%), Postives = 809/1346 (60.10%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            MA  +++I   D    F LW+ K++A+L Q     AL   DK+P+T++ E+K+  +  A 
Sbjct: 1    MAFLKYEIPLLDRNTRFALWQIKMQAVLAQMDLEDALLGIDKMPSTLTDEEKKRKDRKAL 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
              + L+LSN +L+ V+ E+T   +W +L ++  +K   +K++++++ +  +++ G  + E
Sbjct: 61   TQLHLHLSNEILQDVMKEKTAAALWKRLEQICMSKTLTSKLHMKQRLYAHRLEEGASVHE 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
            +L  FK++ S  + +  +   E+   +LL SLP +Y   ++ + Y RE++T D +  ++ 
Sbjct: 121  HLTVFKEILSNLEAMKVQYDKEDLGLILLCSLPPSYSTFRDTILYSRESLTVDEVYDSLT 180

Query: 483  T-KELELLSVKKES-SEGLFVKG---------KGKNKET--KGQSEEKSKPKVR---CNY 542
            +  +++ L VK +S  EGL V+G         +G+ +E   +G+S+ +SK   R   CN+
Sbjct: 181  SYDKMKHLVVKPDSQGEGLIVRGRQDRNTDDDRGRTQERNHRGKSKGRSKSSNRGKTCNF 240

Query: 543  CHKEGHIKRECYSLKRK------NQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQN 602
            C K+GHIK ECY L+ K      NQ  K  +N   EA V E+   YSD         + N
Sbjct: 241  CKKKGHIKSECYKLQNKIKREAANQKGKQPEN-SGEADVVED---YSDGELL---VASVN 300

Query: 603  ETADKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGS 662
            ++    +W++DSGC+FHM+P++ WF+TY+    G+V MGNN +C++AG+G++ +++ DG 
Sbjct: 301  DSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVLMGNNASCKIAGVGTIKVKMFDGV 360

Query: 663  VILLRNVRLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTG-NKINGLYVVK 722
            V  L +VR VP LKRNLISL  LDS G  Y   SG ++I + S VV+ G  K   LYV++
Sbjct: 361  VRTLSDVRYVPELKRNLISLSTLDSKGYRYTAESGVLKISKRSLVVMKGQRKTAKLYVLQ 420

Query: 723  DVQMMESALVVSSDGPTE--SDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCV 782
               +   A V SS    +  + LWH RL H+S  G+ EL+K+G+L       L+FCE CV
Sbjct: 421  GSTITGDAAVASSSLSDDDITKLWHMRLGHMSENGMVELSKRGLLDGQGICKLNFCEHCV 480

Query: 783  IGKAKRQNFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKT 842
             GK KR  F++    TK  LEY+HSDLWGP+   S   + Y LTFIDD+SRK W +FLK 
Sbjct: 481  FGKQKRVRFTRGIHNTKETLEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKVWAFFLKQ 540

Query: 843  KDQVFEKFKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQ 902
            K  VF  FK WK ++EKQT K IK LRTDNGLEFC++EFN FCKS+GI+RH TVR+TPQQ
Sbjct: 541  KSDVFSAFKSWKIMIEKQTGKQIKYLRTDNGLEFCSDEFNRFCKSEGIVRHLTVRHTPQQ 600

Query: 903  NGVAERLYRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGK 962
            NGVAER+ RTIME+VRC LS+A LP+ +WAEAAS   + +NR P  ++   TP+E WSG 
Sbjct: 601  NGVAERMNRTIMEKVRCMLSNANLPKSFWAEAASTACFLINRSPSVAIEKKTPQEVWSGN 660

Query: 963  PPKLQHLKVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEKKCINSRDVFF 1022
            P     LK+FGC ++ H N GKL+ R+IKC+FLG+  GVKGY+LW P  +K + SRDV F
Sbjct: 661  PANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKLWCPENRKVVISRDVVF 720

Query: 1023 REQEMYMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVS 1082
               E  ML   S+ K+   KE Q +VEH++                  +E   + + ++ 
Sbjct: 721  --DETAMLPNLSL-KDCSNKENQKQVEHQI-----------------NTESTPQVSTKIE 780

Query: 1083 QEVQDLQNYSLARDRQRRQIVPPARFSEADCISMALNVADSI-SSEEPKNFEEAVNGPNG 1142
              V     YS+A++R +R+I PP +++EAD ++ ALNVA+ I +++EP N+ EA++  + 
Sbjct: 781  NRVASSPQYSIAKNRTKREIKPPKKYAEADLVAYALNVAEDIDANQEPSNYSEAISCEDS 840

Query: 1143 RQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKG 1202
             +W+ AM EEM SL +N TW L  LP G K +  KW++K KEG  G+ +P++KARLVAKG
Sbjct: 841  EKWMFAMQEEMESLHKNKTWDLVKLPKGKKTVRCKWVFKKKEGTPGVEEPKYKARLVAKG 900

Query: 1203 YTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQ 1262
            Y+Q  G+D++++FSPVVK +SIR LL IV   DLEL+QLDVKTAFLHG L E+IYM QP+
Sbjct: 901  YSQVPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTAFLHGELEEDIYMQQPE 960

Query: 1263 GYVRKGQENLVCYLNKSIYGL--------------------------------NNHQGAG 1322
            G+    +E+ VC L KS+YGL                                 N+ G+ 
Sbjct: 961  GFTVSEKEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNNDGSF 1020

Query: 1323 I---------------KGSMKLSLRLVSRKV------PSTVVCAKEVQTIRSKTS----- 1382
            +               KG ++     +S +       P+  +   E+ T R KTS     
Sbjct: 1021 VYLLLYVDDMLIAAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILTDR-KTSKLYLS 1080

Query: 1383 -----------FN---------PLAHHFKLSAMNSPK-ENELEHQAFMSKIPYSQAVGSL 1442
                       FN         PLA HF+LS+  SP+ ++E+E   +MS +PYS AVGSL
Sbjct: 1081 QKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIE---YMSHVPYSSAVGSL 1140

Query: 1443 MYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR---------LRFRR-------- 1502
            MY MV +RPDLSYA S VSRYM+NPGK HW+AV+WILR         L+F R        
Sbjct: 1141 MYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQFGRTEDGVIGY 1200

Query: 1503 -------GFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLK 1520
                       ++   G  F +G   +SWKATLQ+ VALSTTEAE++A++EA KE IWLK
Sbjct: 1201 VDADFTGDLDRRRSLTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIWLK 1260

[Close]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.7e-224
Identity = 486/1346 (36.11%), Postives = 735/1346 (54.61%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPD-KLPATISAEDKESMNMTA 362
            M+  ++++ KF+G   F  W+ +++ +L QQ  L+ + D D K P T+ AED   ++  A
Sbjct: 1    MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQ-GLHKVLDVDSKKPDTMKAEDWADLDERA 60

Query: 363  YGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLS 422
               I L+LS++V+  +IDE+T   IW +L  LY +K   NK+YL+++ +   M  G    
Sbjct: 61   ASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 423  ENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAI 482
             +L+ F  + ++  NLG KI +E++A +LLNSLP +Y ++   + +G+  I    + SA+
Sbjct: 121  SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 483  RTKELELLSVKKESSEGLFVKGKGKNKE----------TKGQSEEKSKPKVR-CNYCHKE 542
               E ++    +   + L  +G+G++ +           +G+S+ +SK +VR C  C++ 
Sbjct: 181  LLNE-KMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQP 240

Query: 543  GHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDWVI 602
            GH KR+C + ++       +KN  + AA+ +N       L  +++    + +  + +WV+
Sbjct: 241  GHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNV--VLFINEEEECMHLSGPESEWVV 300

Query: 603  DSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVRLV 662
            D+  S H TP +  F  Y   D G V MGN    ++AGIG + ++   G  ++L++VR V
Sbjct: 301  DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 360

Query: 663  PNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESALVV 722
            P+L+ NLIS   LD  G     ++    + + S V+  G     LY   + ++ +  L  
Sbjct: 361  PDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRT-NAEICQGELNA 420

Query: 723  SSDGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQ 782
            + D     DLWHKR+ H+S +GLQ LAK+ ++    G  +  C+ C+ GK  R +F  S 
Sbjct: 421  AQD-EISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSS 480

Query: 783  QTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKFKEWKA 842
            +    IL+ V+SD+ GP    S+  ++YF+TFIDD SRK WVY LKTKDQVF+ F+++ A
Sbjct: 481  ERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHA 540

Query: 843  LVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLYRTIME 902
            LVE++T + +K LR+DNG E+ + EF  +C S GI   +TV  TPQ NGVAER+ RTI+E
Sbjct: 541  LVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVE 600

Query: 903  RVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLKVFGCV 962
            +VR  L  A LP+ +W EA     Y +NR P   L F  PE  W+ K     HLKVFGC 
Sbjct: 601  KVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCR 660

Query: 963  SFVH---QNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEKKCINSRDVFFREQEMYML-- 1022
            +F H   + + KL  ++I C+F+G+ +   GYRLW PV+KK I SRDV FRE E+     
Sbjct: 661  AFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAAD 720

Query: 1023 QKQSVEKELI----------EKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVE 1082
              + V+  +I             T  E   + + S+   +P   +E+G   +EG E   E
Sbjct: 721  MSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEV-SEQGEQPGEVIEQGEQLDEGVE---E 780

Query: 1083 VSQEVQDLQNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPN 1142
            V    Q  + +   R R  R  V   R+   + + ++          EP++ +E ++ P 
Sbjct: 781  VEHPTQGEEQHQPLR-RSERPRVESRRYPSTEYVLIS-------DDREPESLKEVLSHPE 840

Query: 1143 GRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILK-PRFKARLVA 1202
              Q ++AM EEM SL++N T+ L  LP G +P+  KW++K+K+   G  K  R+KARLV 
Sbjct: 841  KNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK--DGDCKLVRYKARLVV 900

Query: 1203 KGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQ 1262
            KG+ Q++GID+ EIFSPVVKMTSIR +LS+    DLE++QLDVKTAFLHG L E IYM Q
Sbjct: 901  KGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQ 960

Query: 1263 PQGYVRKGQENLVCYLNKSIYGL------------------------------------N 1322
            P+G+   G++++VC LNKS+YGL                                    N
Sbjct: 961  PEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSEN 1020

Query: 1323 N----------------HQG--AGIKGSMK--------------LSLRLVSRKVPSTVVC 1382
            N                 +G  A +KG +               L +++V  +    +  
Sbjct: 1021 NFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWL 1080

Query: 1383 AKEVQTIRSKTSFN---------PLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSL 1442
            ++E    R    FN         PLA H KLS    P    +E +  M+K+PYS AVGSL
Sbjct: 1081 SQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCP--TTVEEKGNMAKVPYSSAVGSL 1140

Query: 1443 MYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR-LRFRRG--------------- 1502
            MY MV TRPD+++A  +VSR++ NPGK HWEAVKWILR LR   G               
Sbjct: 1141 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGY 1200

Query: 1503 --------FRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLK 1520
                       +K   G  F      +SW++ LQ  VALSTTEAE+IA +E  KE IWLK
Sbjct: 1201 TDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLK 1260

[Close]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 470.7 bits (1210), Expect = 6.4e-131
Identity = 398/1433 (27.77%), Postives = 647/1433 (45.15%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            M  A+ +I+ FDG+  + +WK +I+A+L +Q  L  +   D L      +  +     A 
Sbjct: 1    MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVV---DGLMPNEVDDSWKKAERCAK 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
             TII  LS++ L     + T  +I   L+ +YE K   +++ LR++  + K+ +   L  
Sbjct: 61   STIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLS 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALK-YGRENITTDGIISAI 482
            +   F ++ SE    G KI + ++   LL +LP  Y  +  A++    EN+T   + + +
Sbjct: 121  HFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRL 180

Query: 483  RTKELELLSVKKESSE-----------GLFVKGKGKNKETKGQS--EEKSKPKVRCNYCH 542
              +E+++ +   ++S+             +     KN+ TK +   +  SK KV+C++C 
Sbjct: 181  LDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCG 240

Query: 543  KEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDW 602
            +EGHIK++C+  KR      + KN+++E  V   T   S  +A   K        D   +
Sbjct: 241  REGHIKKDCFHYKR----ILNNKNKENEKQVQTAT---SHGIAFMVKEVNNTSVMDNCGF 300

Query: 603  VIDSGCSFHMTPSKGWFSTYKE----WDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILL 662
            V+DSG S H+   +  ++   E        +   G        GI    +RL++   I L
Sbjct: 301  VLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGI----VRLRNDHEITL 360

Query: 663  RNVRLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMM 722
             +V        NL+S+  L   G +       + I +           NGL VVK+  M+
Sbjct: 361  EDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISK-----------NGLMVVKNSGML 420

Query: 723  ES-------ALVVSSDGPTESDLWHKRLSHISSRGLQELAKQGI-----LPTGTGNDLSF 782
             +       A  +++       LWH+R  HIS   L E+ ++ +     L          
Sbjct: 421  NNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEI 480

Query: 783  CEQCVIGKAKRQNFSKSQQTT--KGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKS 842
            CE C+ GK  R  F + +  T  K  L  VHSD+ GP +  +L +  YF+ F+D ++   
Sbjct: 481  CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYC 540

Query: 843  WVYFLKTKDQVFEKFKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRT 902
              Y +K K  VF  F+++ A  E   N  +  L  DNG E+ + E   FC  +GI  H T
Sbjct: 541  VTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLT 600

Query: 903  VRYTPQQNGVAERLYRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSL--NFL 962
            V +TPQ NGV+ER+ RTI E+ R  +S A L + +W EA     Y +NR P  +L  +  
Sbjct: 601  VPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSK 660

Query: 963  TPEEKWSGKPPKLQHLKVFGCVSFVH--QNQGKLKARAIKCMFLGFTEGVKGYRLWHPVE 1022
            TP E W  K P L+HL+VFG   +VH    QGK   ++ K +F+G+     G++LW  V 
Sbjct: 661  TPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKLWDAVN 720

Query: 1023 KKCINSRDVFFREQEMY---------MLQKQSVEKE----------LIEKE--------- 1082
            +K I +RDV   E  M          +  K S E E          +I+ E         
Sbjct: 721  EKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECD 780

Query: 1083 ------TQIEVEHELLPSDSALEPET---------------------------------- 1142
                     E E++  P+DS    +T                                  
Sbjct: 781  NIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKR 840

Query: 1143 ------SLERGGGSEEGEEDTVEVSQEVQDLQNYS-------LARDRQRRQIVPPARFSE 1202
                  S   G  +E  E +T E  +E+  + N +       + R  +R +  P   ++E
Sbjct: 841  DDHLNESKGSGNPNESRESETAEHLKEI-GIDNPTKNDGIEIINRRSERLKTKPQISYNE 900

Query: 1203 AD-CISMALNVADSISSEEPKNFEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNG 1262
             D  ++  +  A +I ++ P +F+E     +   W EA+N E+ + + N+TWT+   P  
Sbjct: 901  EDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPEN 960

Query: 1263 YKPIASKWIYKIKEGITGILKP-RFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLS 1322
               + S+W++ +K    G   P R+KARLVA+G+TQ+  IDY E F+PV +++S R +LS
Sbjct: 961  KNIVDSRWVFSVKYNELG--NPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILS 1020

Query: 1323 IVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQENLVCYLNKSIYGLNNHQGA 1382
            +V+Q +L++ Q+DVKTAFL+G L E IYM  PQG +    +N VC LNK+IYGL      
Sbjct: 1021 LVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG-ISCNSDN-VCKLNKAIYGLKQAARC 1080

Query: 1383 GI-------------------------KGSMKLSLRLVSRKVPSTVVCAKEVQTIRS--- 1442
                                       KG++  ++  V   V   V+   ++  + +   
Sbjct: 1081 WFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKR 1140

Query: 1443 -------KTSFNPLAHHFKL-----------------------------SAMNSPKENEL 1502
                    T  N + H   +                             +A+++P  +++
Sbjct: 1141 YLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKI 1200

Query: 1503 EHQAFMS----KIPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR 1520
             ++   S      P    +G LMY+M+ TRPDL+ A +++SRY S      W+ +K +LR
Sbjct: 1201 NYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLR 1260

[Close]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.3e-94
Identity = 370/1449 (25.53%), Postives = 574/1449 (39.61%), Query Frame = 0 

Query: 321  LWKAKIKAIL-GQQKALYALADPDKLPATISAEDKESMN----------MTAYGTIILNL 380
            +W  ++ A+  G + A +        PATI  +    +N             Y  I+  +
Sbjct: 33   MWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAILGAI 92

Query: 381  SNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSENLDEFKK 440
            S +V   V    T  +IW  L K+Y      +   LR   F  + D              
Sbjct: 93   SMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR---FITRFD-------------- 152

Query: 441  MTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIRTKELELL 500
               +   LG+ +  + +   +L +LP+ YK V + +       +   I   +  +E +LL
Sbjct: 153  ---QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLL 212

Query: 501  SVK--------------KESSEGLFVKGKGKNK--------------ETKGQSEEKSKPK 560
            ++               + ++       +G N+               + G   +  +PK
Sbjct: 213  ALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPK 272

Query: 561  V---RCNYCHKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCT 620
                RC  C  +GH  + C  L   +Q+  +   +QS       T  ++     ++ +  
Sbjct: 273  PYLGRCQICSVQGHSAKRCPQL---HQFQSTTNQQQS-------TSPFTPWQPRANLAVN 332

Query: 621  QNETADKFDWVIDSGCSFHMTPSKGWFSTYKEWDGG-IVYMGNNHTCRVAGIGSVSLRLK 680
                A+  +W++DSG + H+T      S ++ + GG  V + +  T  +   GS SL   
Sbjct: 333  SPYNAN--NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS 392

Query: 681  DGSVILLRNVRLVPNLKRNLISLGML---DSIGCTYGGSSGTIEIRRESRVVLTGNKING 740
              S + L  V  VPN+ +NLIS+  L   + +   +  +S  ++       +L G   + 
Sbjct: 393  SRS-LDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDE 452

Query: 741  LYVVKDVQMMESALVVSSDGPTESDLWHKRLSHISSRGLQELAKQGILPT-GTGNDLSFC 800
            LY          ++  S         WH RL H S   L  +     LP     + L  C
Sbjct: 453  LYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSC 512

Query: 801  EQCVIGKAKRQNFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVY 860
              C I K+ +  FS S  T+   LEY++SD+W  +   S+ N RY++ F+D ++R +W+Y
Sbjct: 513  SDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLY 572

Query: 861  FLKTKDQVFEKFKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRY 920
             LK K QV + F  +K+LVE +    I  L +DNG EF       +    GI    +  +
Sbjct: 573  PLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPH 632

Query: 921  TPQQNGVAERLYRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEK 980
            TP+ NG++ER +R I+E     LS A +P+ YW  A S  VY +NR P   L   +P +K
Sbjct: 633  TPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQK 692

Query: 981  WSGKPPKLQHLKVFGCVSFV---HQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEKKCI 1040
              G+PP  + LKVFGC  +      N+ KL+ ++ +C F+G++     Y   H    +  
Sbjct: 693  LFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLY 752

Query: 1041 NSRDVFFRE---------------QEMYMLQKQSVEKELIEKETQI-------------- 1100
             SR V F E               QE       +         T +              
Sbjct: 753  TSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDT 812

Query: 1101 --------------EVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQDLQNYS 1160
                          +V    LPS S   P +S E    S  G + T +  Q      N  
Sbjct: 813  SPRPPSSPSPLCTTQVSSSNLPSSSISSPSSS-EPTAPSHNGPQPTAQPHQTQNSNSNSP 872

Query: 1161 LARD-----------RQRRQI-----------VPPARFSE-------------------- 1220
            +  +            Q   +            P    SE                    
Sbjct: 873  ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPA 932

Query: 1221 -----------ADCISMALNVADSISSEEPK---------NFE--EAVNGPNGRQWIEAM 1280
                        +  SMA    D I     K         N E   A+      +W +AM
Sbjct: 933  PPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAM 992

Query: 1281 NEEMRSLEENDTWTL-KSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQREG 1340
              E+ +   N TW L    P     +  +WI+  K    G L  R+KARLVAKGY QR G
Sbjct: 993  GSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLN-RYKARLVAKGYNQRPG 1052

Query: 1341 IDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKG 1400
            +DY+E FSPV+K TSIR++L + V     + QLDV  AFL G L++ +YM+QP G+V K 
Sbjct: 1053 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKD 1112

Query: 1401 QENLVCYLNKSIYGLNNHQGA------------GIKGSMKLSLRLVSRKVPSTVVCAKEV 1460
            + + VC L K+IYGL     A            G   S+  +   V ++  S +     V
Sbjct: 1113 RPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYV 1172

Query: 1461 --------QTIRSKTSFNPLAHHFK------------LSAMNSPKENELEHQAFM----- 1520
                     T+  K + + L+  F             + A   P+   L  + +      
Sbjct: 1173 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLA 1232

[Close]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 4.0e-93
Identity = 363/1446 (25.10%), Postives = 569/1446 (39.35%), Query Frame = 0 

Query: 321  LWKAKIKAIL-GQQKALYALADPDKLPATISAEDKESMN----------MTAYGTIILNL 380
            +W  ++ A+  G + A +        PATI  +    +N             Y  ++  +
Sbjct: 33   MWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVLGAI 92

Query: 381  SNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSENLDEFKK 440
            S +V   V    T  +IW  L K+Y      +   LR +   +     K + + +     
Sbjct: 93   SMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGT-KTIDDYMQGLVT 152

Query: 441  MTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIRTKELELL 500
               +   LG+ +  + +   +L +LPE YK V + +       T   I   +   E ++L
Sbjct: 153  RFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKIL 212

Query: 501  SV---------------KKESSEGLFVKGKGKNKETKGQSEEKSKP-------------- 560
            +V               +  ++      G   N+     +   SKP              
Sbjct: 213  AVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQ 272

Query: 561  ----KVRCNYCHKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKS 620
                  +C  C  +GH  + C  L    Q+  S  N Q   +        ++    S  S
Sbjct: 273  SKPYLGKCQICGVQGHSAKRCSQL----QHFLSSVNSQQPPSPFTPWQPRANLALGSPYS 332

Query: 621  CTQNETADKFDWVIDSGCSFHMTPSKGWFSTYKEWDGG-IVYMGNNHTCRVAGIGSVSLR 680
                      +W++DSG + H+T      S ++ + GG  V + +  T  ++  GS SL 
Sbjct: 333  SN--------NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 392

Query: 681  LKDGSVILLRNVRLVPNLKRNLISLGML---DSIGCTYGGSSGTIEIRRESRVVLTGNKI 740
             K    + L N+  VPN+ +NLIS+  L   + +   +  +S  ++       +L G   
Sbjct: 393  TK-SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTK 452

Query: 741  NGLYVVKDVQMMESALVVSSDGPTESDLWHKRLSHISSRGLQE-LAKQGILPTGTGNDLS 800
            + LY          +L  S         WH RL H +   L   ++   +      +   
Sbjct: 453  DELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFL 512

Query: 801  FCEQCVIGKAKRQNFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSW 860
             C  C+I K+ +  FS+S   +   LEY++SD+W  +   S  N RY++ F+D ++R +W
Sbjct: 513  SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTW 572

Query: 861  VYFLKTKDQVFEKFKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTV 920
            +Y LK K QV E F  +K L+E +    I    +DNG EF       +    GI    + 
Sbjct: 573  LYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSP 632

Query: 921  RYTPQQNGVAERLYRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPE 980
             +TP+ NG++ER +R I+E     LS A +P+ YW  A +  VY +NR P   L   +P 
Sbjct: 633  PHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPF 692

Query: 981  EKWSGKPPKLQHLKVFGCVSFV---HQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEKK 1040
            +K  G  P    L+VFGC  +      NQ KL  ++ +C+FLG++     Y   H    +
Sbjct: 693  QKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSR 752

Query: 1041 CINSRDVFFREQ---------EMYMLQKQSVEKELI-EKETQIEVEHELLPSDSALEPE- 1100
               SR V F E           +  +Q+Q  E   +    T +     +LP+ S  +P  
Sbjct: 753  LYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHH 812

Query: 1101 -------------------------------TSLERGGGSEEGEEDTVEVSQ---EVQDL 1160
                                           +S E     + G + T + +Q   +    
Sbjct: 813  AATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSS 872

Query: 1161 QNYSL------ARDRQRRQIVPPARFSEAD-------CISMALNVADSISSEEPKNFEEA 1220
            QN S       +  +  + +  PA+ S +          S       SI    P    + 
Sbjct: 873  QNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQI 932

Query: 1221 VNGPN--------------------------------------------GRQWIEAMNEE 1280
            VN  N                                              +W  AM  E
Sbjct: 933  VNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSE 992

Query: 1281 MRSLEENDTWTLKSLPNGYKPIAS-KWIYKIKEGITGILKPRFKARLVAKGYTQREGIDY 1340
            + +   N TW L   P  +  I   +WI+  K    G L  R+KARLVAKGY QR G+DY
Sbjct: 993  INAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLN-RYKARLVAKGYNQRPGLDY 1052

Query: 1341 SEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQEN 1400
            +E FSPV+K TSIR++L + V     + QLDV  AFL G L++++YM+QP G++ K + N
Sbjct: 1053 AETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPN 1112

Query: 1401 LVCYLNKSIYGLNNHQGA------------GIKGSMKLSLRLVSRKVPSTVVCAKEVQTI 1460
             VC L K++YGL     A            G   S+  +   V ++  S V     V  I
Sbjct: 1113 YVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDI 1172

Query: 1461 RSKTSFNPLAHHF--KLSAMNSPKENELEHQAF---MSKIP------------------- 1520
                +   L H+    LS   S K++E  H        ++P                   
Sbjct: 1173 LITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTN 1232

[Close]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-21
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 673 SSGTIEIRRESRVVLTGNKINGLYVVK-DVQMMESALVVSSDGPTESDLWHKRLSHISSR 732
           S G +++ +  R +L GN+ + LY+++  V+  ES L  +     E+ LWH RL+H+S R
Sbjct: 25  SEGVLKVLKGCRTILKGNRHDSLYILQGSVETGESNL--AETAKDETRLWHSRLAHMSQR 84

Query: 733 GLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQTTKGILEYVHSDLWGPAS 790
           G++ L K+G L +   + L FCE C+ GK  R NFS  Q TTK  L+YVHSDLWG  S
Sbjct: 85  GMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPS 140

[Close]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 8.2e-299
Identity = 598/1356 (44.10%), Postives = 811/1356 (59.81%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            MA  RF++ KF+G GDF LW+ KI+AIL Q K    L D ++LP  I+  +K  M+  AY
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKIL-DEERLPDNITESEKRDMDEMAY 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
             TI+L LS+ VLR V +  T  ++W KL  LY TK   NK+Y++EKFF +KMD  K L E
Sbjct: 61   STILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEE 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
            NLDEF+K+  +  N+GEK+ DEN+A +LLNSLPE Y++VK A+KYGR+++T   ++ A++
Sbjct: 121  NLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALK 180

Query: 483  TKELELLSVKKESSEG--LFVKGKGKNKETKGQS---EEKSKPKVR-CNYCHKEGHIKRE 542
            T+ LE   +KKE  +G  L  +G+ + K  KG+      KSK K R C  CHKEGH K+ 
Sbjct: 181  TRNLE---IKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKN 240

Query: 543  CYSLKRKNQYHKSKKNRQSEAAV--GENTITYSDALATSDKSCTQNETAD---------K 602
            C         +KS++   SEA V  G N+   +D     D + T  E+A+         +
Sbjct: 241  C-------PLNKSREASTSEANVTDGYNSAEITDGY---DSAETGYESAEVLMVSHRDIQ 300

Query: 603  FDWVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLR 662
              W++DSGC+FHMTP + + + +++ DGG V +G+N TC V G GSV +   DG V +L 
Sbjct: 301  DAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT 360

Query: 663  NVRLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMME 722
            NVR VP LKRNLISLG LD  GCT    +G +++ + S V L G   +GLYV++   +  
Sbjct: 361  NVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSG 420

Query: 723  SALVVSSDGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQN 782
            SA + S      S LWHKRL+H+S RGLQ L++QG+L      +L FCE C++GK+ R  
Sbjct: 421  SAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVK 480

Query: 783  FSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKF 842
            F K + TTKGIL+YVHSDLWGP    S+  SRYF++ IDD+SRK W+Y LK KD+ F KF
Sbjct: 481  FGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKF 540

Query: 843  KEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLY 902
             EWK  VE QT + +K LRTDNGLEF N +FN FCKS+GI RH TV YTPQQNG+AER  
Sbjct: 541  LEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFN 600

Query: 903  RTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLK 962
            RTIMER RC L++A LP ++W EAA    Y +NR P T+LN  TP+E W+GK P L+HL+
Sbjct: 601  RTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLR 660

Query: 963  VFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLWHPVEK---KCINSRDVFFREQEM 1022
            VFGC ++ H   GKL  RA+KCMF+G+ +GVKGY+LW  +EK   KCI SRDV F E EM
Sbjct: 661  VFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLW-CIEKGMNKCIISRDVTFNETEM 720

Query: 1023 -YMLQKQSVEKELIEKETQIEVEHELLPS---------DSALEPETSLERGGGSEEGEE- 1082
             Y +++Q  ++      T++ +  E+ PS          S +E     E  G   + E  
Sbjct: 721  PYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERI 780

Query: 1083 -----DTVEVSQEVQDLQNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKN 1142
                   +E S    DLQNY L RDR +R+   P R+  AD ++ AL  A      EP  
Sbjct: 781  LIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLT 840

Query: 1143 FEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKP 1202
            FEEA+   + +QW +AM EE+ SL +N TW+L   P   K I SKWIYKIK G  G  KP
Sbjct: 841  FEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKP 900

Query: 1203 RFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFL 1262
            R+KARLVAKGYTQ+EG+D+ EIFSPVV+ +SIR++LSI V  D+ ++Q+DV TAFLHG L
Sbjct: 901  RYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGEL 960

Query: 1263 SENIYMTQPQGYVRKGQENLVCYLNKSIYGL----------------------------- 1322
             E IYM QP+GY  KG+E++VC L+KS+YGL                             
Sbjct: 961  EEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1020

Query: 1323 ---NNHQGAGI----------------------------------KGSMK--LSLRLVSR 1382
                + +G  I                                   G +K  L + +   
Sbjct: 1021 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1080

Query: 1383 KVPSTVVCAKEVQTIR---------SKTSFNPLAHHFKLSAMNSP--KENELEHQAFMSK 1442
            K    +  ++E   I+         SK    PLA HF+LS+   P  K+  +E    MS 
Sbjct: 1081 KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIE----MSN 1140

Query: 1443 IPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR---------LRF 1502
            IPY  AVGS+MYLM+ TRPDL YA S++SR+MSNPGK HW+AVKW+LR         L +
Sbjct: 1141 IPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCY 1200

Query: 1503 RR---------GFR---------PKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFI 1517
             R         GF           ++   G  F L  N++SWK  LQ VVALSTTE+E+I
Sbjct: 1201 SRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYI 1260

[Close]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match: A0A2K3N065 (Copia LTR rider OS=Trifolium pratense OX=57577 GN=L195_g019651 PE=4 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 2.5e-287
Identity = 566/1341 (42.21%), Postives = 781/1341 (58.24%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            M   +++IEKF G  DF LW+ K+KA+L QQ  L AL     + A ++A +K +M   A+
Sbjct: 1    MPSTKYEIEKFTGVNDFGLWRLKMKALLVQQGCLEALKGEAAMNAELTAAEKTNMIEKAH 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
              I+L+L + VLRQV  E T   +WAKL  LY TK   N++YL++  ++FKM   K L+E
Sbjct: 61   SAILLSLGDKVLRQVSKETTASGLWAKLESLYMTKSLVNRLYLKQALYSFKMVEDKVLAE 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
             LD F K+  + +N+  KI DE++A +LL +LP ++   K  L YGRE++T + + SA+ 
Sbjct: 121  QLDMFNKLILDLENIDVKIDDEDQALLLLCALPRSHAHFKETLLYGRESLTFEEVQSALY 180

Query: 483  TKELELLSVKKESS--EGLFVKGKGKNK----ETKGQSEEKSKPK----VRCNYCHKEGH 542
            +K+L      K S+  EGL VKGK   K    + KG+S+ KS       +RC +C KEGH
Sbjct: 181  SKDLNERKEHKPSTVGEGLAVKGKFLRKNGKFDKKGKSQSKSYSDEVSGIRCYHCKKEGH 240

Query: 543  IKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDWVIDS 602
             ++ C     + + H    N    AA+ ++    SD L  S           + +W++DS
Sbjct: 241  TRKVC---PERLKDHGGNGN----AAIVQDDFESSDVLVVSSSD-------SRKEWIMDS 300

Query: 603  GCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVRLVPN 662
            GC++HMTP+K  F    + DGG V +GNN  C++AG+GSV  +L D S+ LL  VR VP+
Sbjct: 301  GCTWHMTPNKDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLHDESIRLLTEVRYVPD 360

Query: 663  LKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESALVVSS 722
            LKRNL+SLG  D  G  + G    + + + S+ VL G K  GLY ++   +  S  VVS+
Sbjct: 361  LKRNLLSLGEFDKKGYVFQGEKSILRVMKGSKEVLRGVKKQGLYTLEAEVVSGSTNVVST 420

Query: 723  DGPTESDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQT 782
               +++++WH RL H+S RGL EL KQ +L       L FCE CV GK+ R  F+K +Q 
Sbjct: 421  KPLSKTEIWHMRLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKFNKGKQR 480

Query: 783  TKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKFKEWKALV 842
            T G L+Y+H+DLWGPA   S S +RYFL+ +DDYSRK WV+  KTKD+ FE FK WK LV
Sbjct: 481  THGSLDYIHADLWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLV 540

Query: 843  EKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLYRTIMERV 902
            E QT + +K LRTDNGLEFCNE F+ FC + GI RHRT   TPQQNG+AER  RTI+ERV
Sbjct: 541  ENQTGRKVKRLRTDNGLEFCNEAFDIFCAASGIARHRTTAGTPQQNGLAERFNRTILERV 600

Query: 903  RCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLKVFGCVSF 962
            RC L+ A L + +WAEA S   Y +NRCP T+L+  TPEE WSG PP L  L+VFGCV++
Sbjct: 601  RCMLTSAGLKKVFWAEAVSTATYLINRCPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAY 660

Query: 963  VHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEMYMLQKQSV 1022
             H  Q K++ RA+KCMF+G+ EGVK YRLW   P  K+CI SRDV F E EM   +   V
Sbjct: 661  AHIRQDKVEPRALKCMFMGYPEGVKAYRLWCLEPGHKRCITSRDVVFNEAEMAFKKTVDV 720

Query: 1023 -------EKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQDL 1082
                   ++EL + E  +EVEH     D+ L     +E        E +  E  +E  D 
Sbjct: 721  GRSTETSDEELEQVEIPVEVEH----VDAELHIPDEVEE-------EAENAEEVEETDD- 780

Query: 1083 QNYSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWIEAM 1142
             +Y L+RDR RR I  P R   AD I+ AL  A  +  EEP++++E +   N  +W++AM
Sbjct: 781  -DYLLSRDRSRRVIKAPQRLGYADLIAYALISASEVLDEEPRDYKEVMRSRNKTEWLKAM 840

Query: 1143 NEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQREGI 1202
            ++EM+SL +N TW L   P G + ++ KWI+K+KEGI G+   R+KARLVA+G+TQ+EG+
Sbjct: 841  DDEMKSLHDNHTWELIKKPAGARLVSCKWIFKVKEGIEGVTSKRYKARLVARGFTQKEGV 900

Query: 1203 DYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQ 1262
            D++++FSPVVK  SIRMLL++V Q DLEL+Q+DVKTAFL+G L E I M QP+GYV +G+
Sbjct: 901  DFNDVFSPVVKHRSIRMLLAMVAQFDLELEQMDVKTAFLYGDLDETILMRQPEGYVERGK 960

Query: 1263 ENLVCYLNKSIYGL---------------------------------------------- 1322
            E+ VC L +S+YGL                                              
Sbjct: 961  EDYVCKLKRSLYGLKQSPRQWNRRFDKFMARISFIRSQFDHCVYFRFRPGNSFVILLLYV 1020

Query: 1323 --------NNHQGAGIKGSMKLSLRL-------------VSRKVPSTVVCAKEVQTIR-- 1382
                    N      +K  +     +             + R    + +C  +   +R  
Sbjct: 1021 DDILIASNNVEDVTRVKAELNKEFDMKDLGAASRILGIDIRRDRKKSKLCLSQEAYLRKI 1080

Query: 1383 --------SKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVSTRP 1442
                    SK    P    FKLS    P  +    +A+M+ IPY+  VGSLMY MV TRP
Sbjct: 1081 LEKFGMSNSKPVVTPTNPQFKLSIDQCPSTD--VERAYMNSIPYANIVGSLMYAMVCTRP 1140

Query: 1443 DLSYATSLVSRYMSNPGKRHWEAVKWILRL-----------------------------R 1502
            D++YA SLVSRYM+NPGK HW+A+KWILR                               
Sbjct: 1141 DIAYAVSLVSRYMANPGKAHWQALKWILRYINGSLNRVLIYGGALGEDSKAVIEGYVDSD 1200

Query: 1503 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1519
            +      +K   G  F +    +SWKATLQ VVALSTTEAE+IAL+EA+KE +WL+G   
Sbjct: 1201 YAGCMDSRKSISGYVFTMFGTAISWKATLQKVVALSTTEAEYIALTEAVKEALWLEGFAK 1260

[Close]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match: A0A2P5W031 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36262 PE=3 SV=1)

HSP 1 Score: 998.0 bits (2579), Expect = 4.2e-287
Identity = 568/1342 (42.32%), Postives = 794/1342 (59.17%), Query Frame = 0 

Query: 295  RTQILKHSMALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDK 354
            R QI+  S++  ++D+EKF GK  F LW+ K++A+L QQ  L AL+  DKLP+T+S E K
Sbjct: 517  RFQIMATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQK 576

Query: 355  ESMNMTAYGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKM 414
            + M   A+  I+L L + VLR+V DE+T   +W +L   Y TK   N++YL+++ +  KM
Sbjct: 577  DDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKM 636

Query: 415  DAGKPLSENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITT 474
            + G P+S++LD+F  +  +  N+  KI DE++A ++L SLP +Y++  + + YGR+++T 
Sbjct: 637  EEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTL 696

Query: 475  DGIISAIRTKELEL----LSVKKESSEGLFVKGKGKNK---ETKGQSEEKSKPKVRCNYC 534
            + + +A+ + EL        V+    EGL  +G+ K K    +K     +SK +++C YC
Sbjct: 697  EEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYC 756

Query: 535  HKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFD 594
             K GH+K +C   K K++  + ++N ++  A  +++      LA SD             
Sbjct: 757  KKYGHMKVDCPKRKEKSE-SQEQQNDRANVADADSSSDAEIVLAVSDSYAGGR------- 816

Query: 595  WVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNV 654
            W++D+G +FH++ SK  FSTY++  G ++ MGN+H C+V GIG+V +++ DG V  L +V
Sbjct: 817  WILDTGATFHISTSKDAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDV 876

Query: 655  RLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESA 714
            R +P +K+NLISL  LD  G  Y    G +++   +  V+ GN   GLY + D   +   
Sbjct: 877  RHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFL-DGSSVTGV 936

Query: 715  LVVSSDGPTESD---LWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQ 774
              VSS    +SD   LWH RL H+S RGL  L+K+G+L       L+FCE CV GK  R 
Sbjct: 937  AGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRV 996

Query: 775  NFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEK 834
             FS     TKG ++Y HSDLWGP+ T S    RY LTFIDDYSRK WVYFLK+K +V   
Sbjct: 997  KFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLIN 1056

Query: 835  FKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERL 894
            FK++KAL+E QT K IK  RTDNGLEFC+ EFN FCK++GI+RHRTVR TPQQNGVAER+
Sbjct: 1057 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1116

Query: 895  YRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHL 954
             RT++ER RC  S+A L E +WAEA +   Y +NR P T++   TPEE WSG P     L
Sbjct: 1117 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGL 1176

Query: 955  KVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEM 1014
            +VFGC ++ H N+GKLK RA KC+FLG+ +GVKGYRLW   PV  K I SRDV F E  M
Sbjct: 1177 RVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSM 1236

Query: 1015 YMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQD 1074
                  S EKE  ++     VE ++       + +  +   G S + ++  V+ S E + 
Sbjct: 1237 LRSTTNSREKEESDRMGDHGVEKQV-----ECQVDAPIPTEGTSVQDDQVEVQDSDEDES 1296

Query: 1075 LQN--YSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWI 1134
             Q   YS+A  R +RQI P  R+  A+ +S AL+VA+SI   EP ++ EAV      QW 
Sbjct: 1297 PQEKPYSIATGRTKRQIKPNPRY--ANLVSFALSVAESIGI-EPSSYNEAVTCDESAQWA 1356

Query: 1135 EAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQR 1194
             AM+EE+ SL +N TW L   P+  K +  KW++K KEGI G+   RFKARLVAKG+TQ+
Sbjct: 1357 IAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQK 1416

Query: 1195 EGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVR 1254
            EGIDY+E+FSPVVK +SIR+LL++V + DLEL+QLDVKTAFLHG L E IYM QP+G+  
Sbjct: 1417 EGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTV 1476

Query: 1255 KGQENLVCYLNKSIYGLNNHQGAGIKGSMKLSLR-----------LVSRK---------- 1314
             G+E+ VC L KS+YGL        K      ++           +  RK          
Sbjct: 1477 PGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLL 1536

Query: 1315 --VPSTVVCAKEVQTI-------------------------------------------- 1374
              V   ++ +K +  I                                            
Sbjct: 1537 LYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYI 1596

Query: 1375 ----------RSKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVS 1434
                      ++KT   PLA HFKLSA  SP+ +E + Q  MS IPYS AVGS+MY MV 
Sbjct: 1597 EKVLQRFGMDKAKTVSTPLAPHFKLSAELSPQSDEEKQQ--MSHIPYSSAVGSVMYAMVC 1656

Query: 1435 TRPDLSYATSLVSRYMSNPGKRHWEAVKWILR-LR------------------------- 1494
            TRPD+S+A S+VSRYMS PGK HW+AVKWILR LR                         
Sbjct: 1657 TRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSD 1716

Query: 1495 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1520
            +      ++   G  F      +SWKA LQS VALSTTEAE++AL+EA+KE +W+KGL++
Sbjct: 1717 YAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVS 1776

[Close]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match: A0A2P5YYC3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV=1)

HSP 1 Score: 995.3 bits (2572), Expect = 2.7e-286
Identity = 567/1341 (42.28%), Postives = 793/1341 (59.13%), Query Frame = 0 

Query: 295  RTQILKHSMALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDK 354
            R QI+  S++  ++D+EKF GK  F LW+ K++A+L QQ  L AL+  DKLP+T+S E K
Sbjct: 496  RFQIMATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQK 555

Query: 355  ESMNMTAYGTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKM 414
            + M   A+  I+L L + VLR+V DE+T   +W +L   Y TK   N++YL+++ +  KM
Sbjct: 556  DDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKM 615

Query: 415  DAGKPLSENLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITT 474
            + G P+S++LD+F  +  +  N+  KI DE++A ++L SLP +Y++  + + YGR+++T 
Sbjct: 616  EEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTL 675

Query: 475  DGIISAIRTKELEL----LSVKKESSEGLFVKGKGKNK---ETKGQSEEKSKPKVRCNYC 534
            + + +A+ + EL        V+    EGL  +G+ K K    +K     +SK +++C YC
Sbjct: 676  EEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYC 735

Query: 535  HKEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFD 594
             K GH+K +C   K K++  + ++N ++  A  +++      LA SD             
Sbjct: 736  KKYGHMKVDCPKRKEKSE-SQEQQNDRANVADADSSSDAEIVLAVSDSYAGGR------- 795

Query: 595  WVIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNV 654
            W++D+G +FH++ SK  FSTY++  G ++ MGN+H C+V GIG+V +++ DG V  L +V
Sbjct: 796  WILDTGATFHISTSKDAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDV 855

Query: 655  RLVPNLKRNLISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESA 714
            R +P +K+NLISL  LD  G  Y    G +++   +  V+ GN   GLY + D   +   
Sbjct: 856  RHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFL-DGSSVTGV 915

Query: 715  LVVSSDGPTESD---LWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQ 774
              VSS    +SD   LWH RL H+S RGL  L+K+G+L       L+FCE CV GK  R 
Sbjct: 916  AGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRV 975

Query: 775  NFSKSQQTTKGILEYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEK 834
             FS     TKG ++Y HSDLWGP+ T S    RY LTFIDDYSRK WVYFLK+K +V   
Sbjct: 976  KFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLIN 1035

Query: 835  FKEWKALVEKQTNKVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERL 894
            FK++KAL+E QT K IK  RTDNGLEFC+ EFN FCK++GI+RHRTVR TPQQNGVAER+
Sbjct: 1036 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1095

Query: 895  YRTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHL 954
             RT++ER RC  S+A L E +WAEA +   Y +NR P T++   TPEE WSG P     L
Sbjct: 1096 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGL 1155

Query: 955  KVFGCVSFVHQNQGKLKARAIKCMFLGFTEGVKGYRLW--HPVEKKCINSRDVFFREQEM 1014
            +VFGC ++ H N+GKLK RA KC+FLG+ +GVKGYRLW   PV  K I SRDV F E  M
Sbjct: 1156 RVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSM 1215

Query: 1015 YMLQKQSVEKELIEKETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQD 1074
                  S EKE  ++     VE ++       + +  +   G S + ++  V+ S E + 
Sbjct: 1216 LRSTTNSREKEESDRMGDHGVEKQV-----ECQVDAPIPTEGTSVQDDQVEVQDSDEDES 1275

Query: 1075 LQN--YSLARDRQRRQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWI 1134
             Q   YS+A  R +RQI P  R+  A+ +S AL+VA+SI   EP ++ EAV      QW 
Sbjct: 1276 PQEKPYSIATGRTKRQIKPNPRY--ANLVSFALSVAESIGI-EPSSYNEAVTCDESAQWA 1335

Query: 1135 EAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQR 1194
             AM+EE+ SL +N TW L   P+  K +  KW++K KEGI G+   RFKARLVAKG+TQ+
Sbjct: 1336 IAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQK 1395

Query: 1195 EGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVR 1254
            EGIDY+E+FSPVVK +SIR+LL++V + DLEL+QLDVKTAFLHG L E IYM QP+G+  
Sbjct: 1396 EGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTV 1455

Query: 1255 KGQENLVCYLNKSIYGLNNHQGAGIKGSMKLSLR-----------LVSRK---------- 1314
             G+E+ VC L KS+YGL        K      ++           +  RK          
Sbjct: 1456 PGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLL 1515

Query: 1315 --VPSTVVCAKEVQTI-------------------------------------------- 1374
              V   ++ +K +  I                                            
Sbjct: 1516 LYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYI 1575

Query: 1375 ----------RSKTSFNPLAHHFKLSAMNSPKENELEHQAFMSKIPYSQAVGSLMYLMVS 1434
                      ++KT   PLA HFKLSA  SP+ +E + Q  MS IPYS AVGS+MY MV 
Sbjct: 1576 EKVLQRFGMDKAKTVSTPLAPHFKLSAELSPQSDEEKQQ--MSHIPYSSAVGSVMYAMVC 1635

Query: 1435 TRPDLSYATSLVSRYMSNPGKRHWEAVKWILR-LR------------------------- 1494
            TRPD+S+A S+VSRYMS PGK HW+AVKWILR LR                         
Sbjct: 1636 TRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSD 1695

Query: 1495 FRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLN 1519
            +      ++   G  F      +SWKA LQS VALSTTEAE++AL+EA+KE +W+KGL++
Sbjct: 1696 YAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVS 1755

[Close]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match: A5BPC1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003191 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 1.9e-279
Identity = 544/1255 (43.35%), Postives = 754/1255 (60.08%), Query Frame = 0 

Query: 303  MALARFDIEKFDGKGDFDLWKAKIKAILGQQKALYALADPDKLPATISAEDKESMNMTAY 362
            M  A+FD+EKF GK DF L + K++A+L QQ    AL     LP+T+  + K  +   A+
Sbjct: 1    MGTAKFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAH 60

Query: 363  GTIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSE 422
              IIL+L + VLR+    ++  ++W KL  LY TK   N+++ + K +TFKM  G  +  
Sbjct: 61   SAIILSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEX 120

Query: 423  NLDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEAYKDVKNALKYGRENITTDGIISAIR 482
            +LD F K+  + +N+   I DE++A +LL SL  +Y ++K+A+ YGR+++T D + S + 
Sbjct: 121  HLDHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILH 180

Query: 483  TKELELL-SVKKESSEGLFVKGKGKNKETKG---QSEEKSK-PKVRCNYCHKEGHIKREC 542
             +EL+     K+ES EGL ++G+ + +E KG   +S  KSK  K +C  CHKEGH K++C
Sbjct: 181  ARELQKQEESKEESGEGLNIRGRSEKREKKGKNSKSRSKSKTKKFKCFICHKEGHFKKDC 240

Query: 543  YSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDWVIDSGCSFH 602
                R+    K   NR +    G                             +  G  F 
Sbjct: 241  PD--RRQNTVKKTVNRWTRVRSG----------------------------YLIQGALFT 300

Query: 603  MTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVRLVPNLKRNL 662
               SK    T+KE DGG V +GNN  C++ G G+V ++  DG   +L +VR +P LKRNL
Sbjct: 301  CVLSKLGLKTFKEADGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNL 360

Query: 663  ISLGMLDSIGCTYGGSSGTIEIRRESRVVLTGNKINGLYVVKDVQMMESALVVSSDGPTE 722
            ISLGMLD  G T+     ++ + R S  V+ G   NGLY +    +      V  +    
Sbjct: 361  ISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVGT 420

Query: 723  SDLWHKRLSHISSRGLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQTTKGIL 782
            + LWH+RL HIS RGLQEL KQG+L      DL FCE CV GKA R  F+K+   T+  L
Sbjct: 421  TKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQL 480

Query: 783  EYVHSDLWGPASTNSLSNSRYFLTFIDDYSRKSWVYFLKTKDQVFEKFKEWKALVEKQTN 842
            +Y+HSDLWGP+   S+  +RYFLT IDDYSRK W+YFLK K + F KFKEWK LVE QT+
Sbjct: 481  DYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTS 540

Query: 843  KVIKCLRTDNGLEFCNEEFNAFCKSQGILRHRTVRYTPQQNGVAERLYRTIMERVRCQLS 902
            + +K LRTDNGLEF + +FN+ C+ +GI RHRTVRYTPQQNG+AER+ RTI+ERVRC LS
Sbjct: 541  RKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLS 600

Query: 903  DAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLKVFGCVSFVHQNQ 962
             + L + +WAEAA   V+ +NR P ++L F TP+EKW+GK    QHLKVFGC ++VH   
Sbjct: 601  SSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKT 660

Query: 963  GKLKARAIKCMFLGFTEGVKGYRLWHPVE--KKCINSRDVFFREQEMYMLQKQSVEKELI 1022
             KL+ RA+KC+FLG+ +GVKGY+LW   +   KCI SRDV F EQ+M    KQ+  K++ 
Sbjct: 661  DKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDM---SKQTPAKDVE 720

Query: 1023 E-KETQIEVEHELLPSDSALEPETSLERGGGSEEGEEDTVEVSQEVQDLQNYSLARDRQR 1082
               + Q EVEHE       L+PE S E    + + E      ++  Q L++Y+L RDRQ+
Sbjct: 721  GLDQLQFEVEHE------TLQPEKSKETSSKTAQEEIVHERQNEPTQGLESYNLVRDRQK 780

Query: 1083 RQIVPPARFSEADCISMALNVADSISSEEPKNFEEAVNGPNGRQWIEAMNEEMRSLEEND 1142
            RQ+ PP R+ +A+  + AL+VA+ I   EPK ++EA+N     QW++A+ EEM SL +N+
Sbjct: 781  RQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNE 840

Query: 1143 TWTLKSLPNGYKPIASKWIYKIKEGITGILKPRFKARLVAKGYTQREGIDYSEIFSPVVK 1202
            TW L + P   K + SKW++K K+G  G   PR+KARLVAKG++Q+EG+DY+EIFSPVVK
Sbjct: 841  TWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVK 900

Query: 1203 MTSIRMLLSIVVQEDLELDQLDVKTAFLHGFLSENIYMTQPQGYVRKGQ----ENLVCYL 1262
             +SIR+LL+ V  EDLELDQLDVKTAFLHG L E IYM  P+    + Q    + LV   
Sbjct: 901  HSSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPERLWGRNQGWSDDMLVACK 960

Query: 1263 NKSIYGLNNHQGAGIKGSMKLSLRLVSRKVPSTVVCAKEVQTIRSKTSFNPLAHHFKLSA 1322
             K            +K  +K    +        ++   E++  RSK     L    K   
Sbjct: 961  EK-------RHLEQVKEMLKAEFEMKDLGSAKRIL-GMEIERDRSK---RVLRLSQKFIH 1020

Query: 1323 MNSPKENELEHQAFMSKIPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAV 1382
            + +P+ +  E + FM +IPY+  VGS+MY MV +RPDL+YA S++SRYMS PGK HW+AV
Sbjct: 1021 LKAPETH--EEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAV 1080

Query: 1383 KWILR---------------------------LRFRRGFRPKKVPIGLFFLLGQNLLSWK 1442
            KW+ +                             +      +K   G  F      +SWK
Sbjct: 1081 KWLFQYLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWK 1140

Query: 1443 ATLQSVVALSTTEAEFIALSEAIKEGIWLKGLLNDFGIKQTTVRIYCDNQSTIFLTKHPQ 1502
            A LQSVVALSTTEAE++A++EA+KE IWLKG+  +  + +  V +YCDNQS I L K+  
Sbjct: 1141 ANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQS 1200

Query: 1503 FNNRTKHIDIKYHFVREEIEKGEVEVLKVHTSDNAADLLTKPLPQLKFQHCLEMV 1519
            F+ R+KHID++ HFVR+ I  GE+ V KVHT DN +D+LTK L   KF+HCL ++
Sbjct: 1201 FHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLI 1203

[Close]
BLAST of Lag0029180 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 187.6 bits (475), Expect = 7.7e-47
Identity = 146/479 (30.48%), Postives = 218/479 (45.51%), Query Frame = 0 

Query: 1101 SEEPKNFEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGI 1160
            ++EP  + EA        W  AM++E+ ++E   TW + +LP   KPI  KW+YKIK   
Sbjct: 83   AKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 142

Query: 1161 TGILKPRFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQLDVKTA 1220
             G ++ R+KARLVAKGYTQ+EGID+ E FSPV K+TS++++L+I    +  L QLD+  A
Sbjct: 143  DGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 202

Query: 1221 FLHGFLSENIYMTQPQGY-VRKGQE---NLVCYLNKSIYGLNNHQGAGIKGSMKLSLRLV 1280
            FL+G L E IYM  P GY  R+G     N VCYL KSIYGL     A  +  +K S+ L+
Sbjct: 203  FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ---ASRQWFLKFSVTLI 262

Query: 1281 S-------------RKVPST------------VVCAKE---------------------- 1340
                           K+ +T            ++C+                        
Sbjct: 263  GFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGP 322

Query: 1341 ------VQTIRSKTSFNPLAHHFKLSAMNS-----------PKENELEHQA-----FMSK 1400
                  ++  RS    N     + L  ++            P +  +   A     F+  
Sbjct: 323  LKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDA 382

Query: 1401 IPYSQAVGSLMYLMVSTRPDLSYATSLVSRYMSNPGKRHWEAVKWILR------------ 1460
              Y + +G LMYL + TR D+S+A + +S++   P   H +AV  IL             
Sbjct: 383  KAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY 442

Query: 1461 -------------LRFRRGFRPKKVPIGLFFLLGQNLLSWKATLQSVVALSTTEAEFIAL 1481
                           F+     ++   G    LG +L+SWK+  Q VV+ S+ EAE+ AL
Sbjct: 443  SSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 502

[Close]
BLAST of Lag0029180 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-22
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 673 SSGTIEIRRESRVVLTGNKINGLYVVK-DVQMMESALVVSSDGPTESDLWHKRLSHISSR 732
           S G +++ +  R +L GN+ + LY+++  V+  ES L  +     E+ LWH RL+H+S R
Sbjct: 25  SEGVLKVLKGCRTILKGNRHDSLYILQGSVETGESNL--AETAKDETRLWHSRLAHMSQR 84

Query: 733 GLQELAKQGILPTGTGNDLSFCEQCVIGKAKRQNFSKSQQTTKGILEYVHSDLWGPAS 790
           G++ L K+G L +   + L FCE C+ GK  R NFS  Q TTK  L+YVHSDLWG  S
Sbjct: 85  GMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPS 140

[Close]
BLAST of Lag0029180 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-14
Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 886 RTIMERVRCQLSDAMLPERYWAEAASYTVYTLNRCPHTSLNFLTPEEKWSGKPPKLQHLK 945
           RTI+E+VR  L +  LP+ + A+AA+  V+ +N+ P T++NF  P+E W    P   +L+
Sbjct: 3   RTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLR 62

Query: 946 VFGCVSFVHQNQGKLKARAIK 967
            FGCV+++H ++GKLK RA K
Sbjct: 63  RFGCVAYIHCDEGKLKPRAKK 83

[Close]
BLAST of Lag0029180 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 0 

Query: 1102 EEPKNFEEAVNGPNGRQWIEAMNEEMRSLEENDTWTLKSLPNGYKPIASKWIYKIKEGIT 1161
            +EPK+   A+  P    W +AM EE+ +L  N TW L   P     +  KW++K K    
Sbjct: 26   KEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 1162 GILKPRFKARLVAKGYTQREGIDYSEIFSPVVKMTSIRMLLSIVVQEDLELDQ 1215
            G L  R KARLVAKG+ Q EGI + E +SPVV+  +IR +L++  Q  LE+ Q
Sbjct: 86   GTL-DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ--LEVGQ 132

[Close]
BLAST of Lag0029180 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.6e-06
Identity = 87/377 (23.08%), Postives = 146/377 (38.73%), Query Frame = 0 

Query: 318 DFDLWKAKIKAILGQQKALYALA-----DPDKLP---ATISAEDKES------MNMTAYG 377
           D+++W    K+ L +Q     +      DP K P   ATI  E+          +  A  
Sbjct: 16  DYEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQ 75

Query: 378 TIILNLSNNVLRQVIDEETPLKIWAKLNKLYETKDAHNKMYLREKFFTFKMDAGKPLSEN 437
            +  +L+++V R+ +   +   +W  L K       + +  +R      +    + L + 
Sbjct: 76  ILQSSLTDSVFRKTLSASSAKDVWDLLRK------GNEQATIRR----LEQVTIRRLEKQ 135

Query: 438 LDEFKKMTSEFKNLGEKIGDENEAFVLLNSLPEA------YKDVKNALKYGRENITTDGI 497
           L++ K +    K  G    D  +A  +L  L  A      Y+  KN         T  G 
Sbjct: 136 LEDLKMVD---KESGSSYLD--KALEILERLGRAKLEKSDYEICKNVF------TTLSGS 195

Query: 498 ISAIRTKELELLSVKKESSEGLF------VKGKGKNKETKGQSEE---KSKPKVRCNYCH 557
              + +   EL+ V K +S+ L       V      +   G  ++   KSK +  C  C+
Sbjct: 196 FDGLDSMLEELIDVHKMTSKSLVEYFYYRVHESSTEEAIFGLLKDLRLKSKSEKWCGLCY 255

Query: 558 KEGHIKRECYSLKRKNQYHKSKKNRQSEAAVGENTITYSDALATSDKSCTQNETADKFDW 617
           K  H + +C     K + H  K+ ++ E  V     T  +  A         +T D   W
Sbjct: 256 KNNHNQEDC-----KFRIHTDKEEKEDEIVVDYRLETVPNLGA---------KTYDDDIW 315

Query: 618 VIDSGCSFHMTPSKGWFSTYKEWDGGIVYMGNNHTCRVAGIGSVSLRLKDGSVILLRNVR 666
           +I      +MTP   +F+T        V   +     V G G V +R+K+G    +RNV 
Sbjct: 316 IIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVI 357

The following BLAST results are available for this feature:
BLAST of Lag0029180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050719.11.7e-29844.10putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
PNX96445.15.1e-28742.21copia LTR rider [Trifolium pratense][more]
PPR84446.18.8e-28742.32hypothetical protein GOBAR_AA36262 [Gossypium barbadense][more]
PPS20553.15.7e-28642.28hypothetical protein GOBAR_AA00016 [Gossypium barbadense][more]
KAG8484780.12.0e-28341.75hypothetical protein CXB51_021428 [Gossypium anomalum][more]
BLAST of Lag0029180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109781.7e-22436.11Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041466.4e-13127.77Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.3e-9425.53Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW24.0e-9325.10Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P932937.0e-2143.22Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Lag0029180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UB258.2e-29944.10Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A2K3N0652.5e-28742.21Copia LTR rider OS=Trifolium pratense OX=57577 GN=L195_g019651 PE=4 SV=1[more]
A0A2P5W0314.2e-28742.32Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36262 PE=3 SV... [more]
A0A2P5YYC32.7e-28642.28Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV... [more]
A5BPC11.9e-27943.35Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003191 PE=4 SV=1[more]
BLAST of Lag0029180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.17.7e-4730.48cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00300.15.0e-2243.22Gag-Pol-related retrotransposon family protein [more]
ATMG00710.12.3e-1443.21Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
ATMG00820.13.8e-1441.59Reverse transcriptase (RNA-dependent DNA polymerase) [more]
AT3G21000.16.6e-0623.08Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 358..485
e-value: 2.8E-30
score: 104.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1025..1058
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 350..1259
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1390..1507
e-value: 1.06267E-59
score: 199.232
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1133..1259
e-value: 4.7E-39
score: 134.4
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 796..875
e-value: 4.2E-9
score: 36.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 770..938
score: 23.09115
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 694..761
e-value: 9.4E-14
score: 51.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 767..955
e-value: 4.5E-41
score: 142.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 523..537
score: 8.729682
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 778..947
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 505..544

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029180.1Lag0029180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding