Lag0029155 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAACCATGCAGCATTCTCCCCCCTCCTCCTCCTCCCCGATGACTCCCTCCGTTCCACAGCCACCGGAGCCGGCTGGTCCGAAACCTACGACTGCTTCCTCTTAAGCGCCCACCTCCACTCCTCCCCTCTCCGCCACCACTCCCCCAACGGCTTCATCTTCCGCCTCCAACTCTCCCACTTCCTCATTCCCCTCTACATCCCTCACTCCTCCTTCCTCCTCTCCTCCTCTTCCCACCTCCTCCACTTCCCTCCCTCCCACTTCTCCTCCTCCTCCTCCTCCGTCCGCCACTTCGTCCTCTCCACTCTCTCCGACCTCGGCGTCCCCCTCTCCGACCCCGACTCTCTCGCCCGCCTCATCTCCTCCTTCATCCACTCCCACCACCACCTCGCCCTCTCCTCCCCCGTCCCCCTCTACATCTCCTTCACCTGCACCACCCTCCTCCGTGACCACGCCGAGGCTGCCGACTGGCTCCACCGCGGCACCCCCGACTCCCACGTCCTCAGGACTCTCAGGGCCACCGGCGACGTCCTCAGGAGGCTCAAAGACCAGAGCTTTGATGCCTCGTCGTTGACCTTGGAGGATGAGAGCTGCTGCATGGTGTGCTTGGAGGACTTTGCCGAACCAGACGGCGGCGCTGTGAGTCGGCTTCCGTGCTCCCATGTCTTCCATTATGGGTGCGTCTCTCAGTGGCTCAAGTTCGACTACCGCTGCCCGGTTTGCCGCTCTCCCTTGCCTTGGGTTCAAGCGCTCTTCCCTCAGCCTTATTCTCCTTCTTTGCCTTTGCCTGCAACCTCATCCACCGACTGTCGCCATGATCCTGCACCAGGGGTTCTTGACAAAGTGGGGTTCTTTCTTAAGAATGTGGTTAAAAACATGTTGAGTTTGAACTAGCTCTCTTGTAAAATGTGATTGTTGTTACTTTTTATTATTTTTATTTTTTCATGTGTATTCATCAACTTCTCTCTGTAAAATGTGATTGATTCATTTTCATGATGAATAAATAATAATACACAAGAGCTACCTTTTCTAAATGTTAAAAGGATTGATATATAATTAAATTTATCCTAACCCATAAGCTTAAACGTTTGGGTGACATATCTCATTCCATTTAATTTCTATGGTTTTAAGTTTCATGCTCTAAAATAATCTAAAGGATTCTTGAGAAGTATTAATTTTAATTAGACTTGCATACTTGTACGTAGGTAGGGATGATACCCCACTAAAATCTTGATAACTAAAAAAGAAAAAAGGTAAAAAAAAAAAAAAAAAAAAATATAACCTTTCTTGATTGACAAGATTCTAATAGTGGTATGTAGCTAAGGAGATTTATGTATATTGATATGCAATAAGTATTGTCTCAAAATGATGATTAAGGTTTTATTGTATTATTTATGGTAAAATCTAAACTGTTAACCAAAGGTATCGATGGGCTAAGCGAGGGCATGTTCAAGAGCGTGGATAATTAGAGAGGAAAAGAGGTTTGGAATATTTTACCATTCTGATTTTTAGTTCAGAATTTATTTTTTCAAATTAATTTTCTAGCTCAATTGTCATGTACTAAAAAAAAAAAAAAAAAACAAAGATTTACAAAATTTTGTAGCTTAATTCACTAAATCGGTATTTTCTTTTAGTCATTTACAAGGATTTCCCAAATCTGATAATAATTGGGCCATCAATACTATCAACAAATCTATTGGGATCTGGAGTGAAGTGAAGGCCCTTGTGGAAGAAGTATGGAGTTTGATGTCCATTTTGGCTTTATCTGAAGAAATTGTAATGTTGTTGCTGATAATATTGCTAAAGTGAGCAAGAATCTTAGAATTTAGTGAATCTTGGGTGGAAAATTTTCCAAGCTGGATATCTACTTTGGTCGATTCTAACCATGAGTTGTTTGCCCGTGTGGCGTTTTAATATACAGTAATTTTTGTTCGTAAAAAAAAAGGGGAACACTTAATTATTTATCATATTATATGTCGGTACTTTTTTTAAGATTAATAGGTGGAGTATTGATTTGAAACTTGAACCTTTTGATTATAAGGATATAGGTGTCTTTTGTATTTTAGTTAATATCTTTCTGTTAATTATTGTTATTCACCTCTGTATAAATACTCATATTATTCATTAATAATAAGTGAGGTGAAATTATTTACTTTCTGTGTGTAAAGTTCTTATGGTATTAGAGTAGGGAGTTTCTCTCTCCACGTGTGGATTTTGATCTTTGCTTTTCGCGCGAAATCCATGGCTTCCGTGAATTCCTATGCAATTTCATCTCCTTTAGAACAATCACTCAGCTCTTCGATTGTTCTCTTGACGAACATCAGAAACCTCATCACTGTTCGTCTGGATTGGTCCAATTATGTTCTTTAGCATTTTTAGATTTCTCCTCTTCTCAAAGCACACAAATTATTCGGATTTCTTGATGACAAGATTCCTGCTCTAGCAGAGACAATCACTGTCGATGGAATTTCTCAACCTAATCCAGCGTTTGAAGTTTGGTTTGAGAAGGATCAAGCCCTAATTACACTCATCAATGCAACATTGTCTCAATCGGCACTTGCATATGCGATTGGTTGCAAAACTTCTCGAGAGGTTTGGACTCGACTTGAAAAACATTTTTCTTCTTCTACACAGTCACACATTGTTGGTTTGAAGTCTAATTTACCGAGCATCACGAAATTACCTACCGAGTCAATCAATACTTATGTTCAACGAATTAAAGATATTGTGAACAAGCTTGCCGCTGTATCGGTTGTTGTTGATCAAGAAGATGTTGCAATTTATGCACTCAATGGACTTCCTTCATCTTACAATGTGTTTAAGACTACAGTTCGTACAAGATCTCAAAATCTTTCTTTTGAGGAATTACACGTATTGATGATTTCAGAAGAGCGTGCTTTAGAACAGCAGGTCAAAACTGAGGTTTCTTCTCAATCACTTGCTATGAATGTCAATTTCTCTGGAAATGGCCGTGGAAATTCTGGAAATGGCCGAGGATTTGGTGGAAATGGTCGTGGCCGTGGCAGATCTGGAGGTAGAGGTTTATTTCAACAACTTCTTAACTCCTCCTTTTCGACCTCATCTGGTTCTAGTAGTCGAGGATCTGGTAATTCACTTTCTAAAGTTGAAACATCTGGTGCTACTTCTCCAAAAGTCACATGTCAAATTCGCCAAAGGTTTGGACATAATGCACTGGATTGCTACCACAAATATGGTTTTAATTTTCGTGGCCGCTTACCACCGAATCAACTTGCTGCTCTTGCTGCTTCTACAACTCATGGACAACCTTCTGGATCTGTCTCCAATGTTTCAAACTCTCAGGTTTGA ATGGTAAACCATGCAGCATTCTCCCCCCTCCTCCTCCTCCCCGATGACTCCCTCCGTTCCACAGCCACCGGAGCCGGCTGGTCCGAAACCTACGACTGCTTCCTCTTAAGCGCCCACCTCCACTCCTCCCCTCTCCGCCACCACTCCCCCAACGGCTTCATCTTCCGCCTCCAACTCTCCCACTTCCTCATTCCCCTCTACATCCCTCACTCCTCCTTCCTCCTCTCCTCCTCTTCCCACCTCCTCCACTTCCCTCCCTCCCACTTCTCCTCCTCCTCCTCCTCCGTCCGCCACTTCGTCCTCTCCACTCTCTCCGACCTCGGCGTCCCCCTCTCCGACCCCGACTCTCTCGCCCGCCTCATCTCCTCCTTCATCCACTCCCACCACCACCTCGCCCTCTCCTCCCCCGTCCCCCTCTACATCTCCTTCACCTGCACCACCCTCCTCCGTGACCACGCCGAGGCTGCCGACTGGCTCCACCGCGGCACCCCCGACTCCCACGTCCTCAGGACTCTCAGGGCCACCGGCGACGTCCTCAGGAGGCTCAAAGACCAGAGCTTTGATGCCTCGTCGTTGACCTTGGAGGATGAGAGCTGCTGCATGGTGTGCTTGGAGGACTTTGCCGAACCAGACGGCGGCGCTGTGAGTCGGCTTCCGTGCTCCCATGTCTTCCATTATGGGTGCGTCTCTCAGTGGCTCAAGTTCGACTACCGCTGCCCGGTTTGCCGCTCTCCCTTGCCTTGGGTTCAAGCGCTCTTCCCTCAGCCTTATTCTCCTTCTTTGCCTTTGCCTGCAACCTCATCCACCGACTGTCGCCATGATCCTGCACCAGGGGTTCTTGACAAAGTGGGTCATTTACAAGGATTTCCCAAATCTGATAATAATTGGGCCATCAATACTATCAACAAATCTATTGGGATCTGGAGTGAAGTGAAGGCCCTTGTGGAAGAAGTATGGAGTTTGATGTCCATTTTGGCTTTATCTGAAGAAATTATTTCTCCTCTTCTCAAAGCACACAAATTATTCGGATTTCTTGATGACAAGATTCCTGCTCTAGCAGAGACAATCACTGTCGATGGAATTTCTCAACCTAATCCAGCGTTTGAAGTTTGGTTTGAGAAGGATCAAGCCCTAATTACACTCATCAATGCAACATTGTCTCAATCGGCACTTGCATATGCGATTGGTTGCAAAACTTCTCGAGAGGTTTGGACTCGACTTGAAAAACATTTTTCTTCTTCTACACAGTCACACATTGTTGGTTTGAAGTCTAATTTACCGAGCATCACGAAATTACCTACCGAGTCAATCAATACTTATGTTCAACGAATTAAAGATATTGTGAACAAGCTTGCCGCTGTATCGGTTGTTGTTGATCAAGAAGATGTTGCAATTTATGCACTCAATGGACTTCCTTCATCTTACAATGTGTTTAAGACTACAGTTCGTACAAGATCTCAAAATCTTTCTTTTGAGGAATTACACGTATTGATGATTTCAGAAGAGCGTGCTTTAGAACAGCAGGTCAAAACTGAGGTTTCTTCTCAATCACTTGCTATGAATGTCAATTTCTCTGGAAATGGCCGTGGAAATTCTGGAAATGGCCGAGGATTTGGTGGAAATGGTCGTGGCCGTGGCAGATCTGGAGGTAGAGGTTTATTTCAACAACTTCTTAACTCCTCCTTTTCGACCTCATCTGGTTCTAGTAGTCGAGGATCTGGTAATTCACTTTCTAAAGTTGAAACATCTGGTGCTACTTCTCCAAAAGTCACATGTCAAATTCGCCAAAGGTTTGGACATAATGCACTGGATTGCTACCACAAATATGGTTTTAATTTTCGTGGCCGCTTACCACCGAATCAACTTGCTGCTCTTGCTGCTTCTACAACTCATGGACAACCTTCTGGATCTGTCTCCAATGTTTCAAACTCTCAGGTTTGA ATGGTAAACCATGCAGCATTCTCCCCCCTCCTCCTCCTCCCCGATGACTCCCTCCGTTCCACAGCCACCGGAGCCGGCTGGTCCGAAACCTACGACTGCTTCCTCTTAAGCGCCCACCTCCACTCCTCCCCTCTCCGCCACCACTCCCCCAACGGCTTCATCTTCCGCCTCCAACTCTCCCACTTCCTCATTCCCCTCTACATCCCTCACTCCTCCTTCCTCCTCTCCTCCTCTTCCCACCTCCTCCACTTCCCTCCCTCCCACTTCTCCTCCTCCTCCTCCTCCGTCCGCCACTTCGTCCTCTCCACTCTCTCCGACCTCGGCGTCCCCCTCTCCGACCCCGACTCTCTCGCCCGCCTCATCTCCTCCTTCATCCACTCCCACCACCACCTCGCCCTCTCCTCCCCCGTCCCCCTCTACATCTCCTTCACCTGCACCACCCTCCTCCGTGACCACGCCGAGGCTGCCGACTGGCTCCACCGCGGCACCCCCGACTCCCACGTCCTCAGGACTCTCAGGGCCACCGGCGACGTCCTCAGGAGGCTCAAAGACCAGAGCTTTGATGCCTCGTCGTTGACCTTGGAGGATGAGAGCTGCTGCATGGTGTGCTTGGAGGACTTTGCCGAACCAGACGGCGGCGCTGTGAGTCGGCTTCCGTGCTCCCATGTCTTCCATTATGGGTGCGTCTCTCAGTGGCTCAAGTTCGACTACCGCTGCCCGGTTTGCCGCTCTCCCTTGCCTTGGGTTCAAGCGCTCTTCCCTCAGCCTTATTCTCCTTCTTTGCCTTTGCCTGCAACCTCATCCACCGACTGTCGCCATGATCCTGCACCAGGGGTTCTTGACAAAGTGGGTCATTTACAAGGATTTCCCAAATCTGATAATAATTGGGCCATCAATACTATCAACAAATCTATTGGGATCTGGAGTGAAGTGAAGGCCCTTGTGGAAGAAGTATGGAGTTTGATGTCCATTTTGGCTTTATCTGAAGAAATTATTTCTCCTCTTCTCAAAGCACACAAATTATTCGGATTTCTTGATGACAAGATTCCTGCTCTAGCAGAGACAATCACTGTCGATGGAATTTCTCAACCTAATCCAGCGTTTGAAGTTTGGTTTGAGAAGGATCAAGCCCTAATTACACTCATCAATGCAACATTGTCTCAATCGGCACTTGCATATGCGATTGGTTGCAAAACTTCTCGAGAGGTTTGGACTCGACTTGAAAAACATTTTTCTTCTTCTACACAGTCACACATTGTTGGTTTGAAGTCTAATTTACCGAGCATCACGAAATTACCTACCGAGTCAATCAATACTTATGTTCAACGAATTAAAGATATTGTGAACAAGCTTGCCGCTGTATCGGTTGTTGTTGATCAAGAAGATGTTGCAATTTATGCACTCAATGGACTTCCTTCATCTTACAATGTGTTTAAGACTACAGTTCGTACAAGATCTCAAAATCTTTCTTTTGAGGAATTACACGTATTGATGATTTCAGAAGAGCGTGCTTTAGAACAGCAGGTCAAAACTGAGGTTTCTTCTCAATCACTTGCTATGAATGTCAATTTCTCTGGAAATGGCCGTGGAAATTCTGGAAATGGCCGAGGATTTGGTGGAAATGGTCGTGGCCGTGGCAGATCTGGAGGTAGAGGTTTATTTCAACAACTTCTTAACTCCTCCTTTTCGACCTCATCTGGTTCTAGTAGTCGAGGATCTGGTAATTCACTTTCTAAAGTTGAAACATCTGGTGCTACTTCTCCAAAAGTCACATGTCAAATTCGCCAAAGGTTTGGACATAATGCACTGGATTGCTACCACAAATATGGTTTTAATTTTCGTGGCCGCTTACCACCGAATCAACTTGCTGCTCTTGCTGCTTCTACAACTCATGGACAACCTTCTGGATCTGTCTCCAATGTTTCAAACTCTCAGGTTTGA MVNHAAFSPLLLLPDDSLRSTATGAGWSETYDCFLLSAHLHSSPLRHHSPNGFIFRLQLSHFLIPLYIPHSSFLLSSSSHLLHFPPSHFSSSSSSVRHFVLSTLSDLGVPLSDPDSLARLISSFIHSHHHLALSSPVPLYISFTCTTLLRDHAEAADWLHRGTPDSHVLRTLRATGDVLRRLKDQSFDASSLTLEDESCCMVCLEDFAEPDGGAVSRLPCSHVFHYGCVSQWLKFDYRCPVCRSPLPWVQALFPQPYSPSLPLPATSSTDCRHDPAPGVLDKVGHLQGFPKSDNNWAINTINKSIGIWSEVKALVEEVWSLMSILALSEEIISPLLKAHKLFGFLDDKIPALAETITVDGISQPNPAFEVWFEKDQALITLINATLSQSALAYAIGCKTSREVWTRLEKHFSSSTQSHIVGLKSNLPSITKLPTESINTYVQRIKDIVNKLAAVSVVVDQEDVAIYALNGLPSSYNVFKTTVRTRSQNLSFEELHVLMISEERALEQQVKTEVSSQSLAMNVNFSGNGRGNSGNGRGFGGNGRGRGRSGGRGLFQQLLNSSFSTSSGSSSRGSGNSLSKVETSGATSPKVTCQIRQRFGHNALDCYHKYGFNFRGRLPPNQLAALAASTTHGQPSGSVSNVSNSQV Homology
BLAST of Lag0029155 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.2 bits (544), Expect = 3.4e-51 Identity = 138/307 (44.95%), Postives = 186/307 (60.59%), Query Frame = 0
BLAST of Lag0029155 vs. NCBI nr
Match: KAG7015254.1 (hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.2 bits (544), Expect = 3.4e-51 Identity = 138/307 (44.95%), Postives = 186/307 (60.59%), Query Frame = 0
BLAST of Lag0029155 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]) HSP 1 Score: 209.9 bits (533), Expect = 6.5e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]) HSP 1 Score: 209.9 bits (533), Expect = 6.5e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]) HSP 1 Score: 209.9 bits (533), Expect = 6.5e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 8.3e-08 Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 3.2e-07 Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy Swiss-Prot
Match: P90990 (E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 PE=3 SV=3) HSP 1 Score: 57.0 bits (136), Expect = 9.2e-07 Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy Swiss-Prot
Match: Q6NRV8 (E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis OX=8355 GN=rnf111-b PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-06 Identity = 27/57 (47.37%), Postives = 32/57 (56.14%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy Swiss-Prot
Match: Q9FMM4 (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RHG1A PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-06 Identity = 22/67 (32.84%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-50 Identity = 132/301 (43.85%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Lag0029155 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 9.1e-50 Identity = 141/332 (42.47%), Postives = 207/332 (62.35%), Query Frame = 0
BLAST of Lag0029155 vs. TAIR 10
Match: AT5G37250.1 (RING/U-box superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 2.8e-11 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Lag0029155 vs. TAIR 10
Match: AT5G37270.1 (RING/U-box superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 3.1e-10 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of Lag0029155 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 2.0e-09 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of Lag0029155 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 3.5e-09 Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0
BLAST of Lag0029155 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 5.9e-09 Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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