Lag0028932 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028932
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr8: 33074073 .. 33075882 (-)
RNA-Seq ExpressionLag0028932
SyntenyLag0028932
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGTAATGAGGAGGAGATTTGATGCCCGATCCTTTATGAGAGACTTCCTGACTTCTGTTACAATTGTGGACGATTAGGCCACTCGAGGAGGGAGTGTGTGCATGAAATGGTGGATGGTGGACATGGGGTTAAGGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGTTTGTCCTGAGTTGGTATCTGCTGAAAATGTGGAGGTGGCTGGAGACCAGCCTCGCCAGTCATTATGAGTATGCTTTTTTGGAATGCACGAGGTATGGGGTCGGATCGTGCATTCCATAAGTTGCATAAGTTAGTGCAACAACAACGACCTCTGTTGGTGTTCCTTTCAGAAACAAAGGTGCACTCTTCACGTTTTGAGATGATAAAAGTTAAATTGGGTTTTGATGGTTGCTTTAGTGTTGTTAGTGCAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGTTTAGTCTTATTTCTTACTCACCGAATCATATTGATGGGTGGGTGGATTGGAACTTGACCTAGTGGCGTTTAACAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGTAGAACCTTTTTCCCCAGCAGGAGGTTACCCACCTGGACTTTAGCAGATCAGATCACCGACCGGTATTGCTCTCGTTACTCTCGCCATCTCAGTTGGGAGAGGGGTGTGGGCGTAGGATCCATCGCTTTGAGGATGTCTGGTTGATGTATCCTTAGTTCAGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

mRNA sequence

ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

Coding sequence (CDS)

ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

Protein sequence

MAAMLGEKIGRVEEVYGSEENEWFGPILRLRVCLNLDRPLRKGFKLQVRSVWRMDEGRDVGGRGREEGAEEKKESLSPDREGANGDEGGESFGLGVDVGSGGQSGAGVEGGEVNDIGDPEAQVSLKGNEKVGLGETSGVSGSVGVMEVDGVEDNQAEGCSEVERIQKGKKWKKRARGVLMDVTNTVDTTEGLGPKRKSPSCAPGSNGSKKARGENVSDEEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAWQVVEESWQSGAAEVSPVGLMMATEHCLASLVKWGRGKVGRYGVKDLEFPIPLQRKQLDRS
Homology
BLAST of Lag0028932 vs. NCBI nr
Match: XP_042988702.1 (uncharacterized protein LOC122316234 [Carya illinoinensis])

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-23
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 0

Query: 214 ENVSDEEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILF 273
           ENVS   K  +        +G Y +P A  + R+W LL+ LC      W+V GDFN ILF
Sbjct: 94  ENVSKSLKYFI--------TGFYGNPDASQRWRSWDLLRSLCHRDDEAWLVFGDFNEILF 153

Query: 274 HHENDGGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNM 333
            HE   GRD+S++++N FR  +D CSL D+GF+G  +TWCN R     V ER+DR  GN 
Sbjct: 154 SHEKLAGRDRSQSQMNDFRQTMDACSLWDIGFRGPKYTWCNGRDPESRVCERLDRFFGNS 213

Query: 334 AWQVV---EESWQSGAAEVSPVGLMMATE 360
            W V+    E    GAA    + + +A+E
Sbjct: 214 RWWVLFPQVEVVHGGAAYSDHIPISLASE 234

BLAST of Lag0028932 vs. NCBI nr
Match: XP_018816246.1 (uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical protein F2P56_019199 [Juglans regia])

HSP 1 Score: 119.0 bits (297), Expect = 9.2e-23
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 233 SGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFR 292
           + +Y  P+  L+ ++WSLLK LC  P  PW+V GDFN +L  HE  GG  + E +L+ FR
Sbjct: 105 TALYGFPETHLRHQSWSLLKSLCRAPDEPWLVLGDFNELLSAHEKSGGNPRPEKQLSAFR 164

Query: 293 DAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW 336
           + +D C L DLGF G M TW NRR G + + ER+D CL N  W
Sbjct: 165 EVVDVCRLRDLGFSGPMLTWSNRRAGDKCIRERLDHCLVNSMW 207

BLAST of Lag0028932 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia])

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-22
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 0

Query: 219 EEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHEND 278
           E  +  W +     +G+Y HP A  +  TW+L++ LC   + PW+VGGDFN +L+ HE  
Sbjct: 94  ESDLAEWRF-----TGVYGHPDASNRYLTWNLMRTLCPSTSGPWLVGGDFNEVLYLHEKR 153

Query: 279 GGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGN-MAWQV 338
           GGR    A+L  FR  ++ C+L DLGF+G  FTWCN R G + + ER+DR  GN   W+V
Sbjct: 154 GGRPWPYAQLENFRAVMEDCALQDLGFQGPRFTWCNGRTGIQRISERLDRFFGNQQLWEV 208

BLAST of Lag0028932 vs. NCBI nr
Match: XP_018812547.1 (uncharacterized protein LOC108984903 [Juglans regia] >KAF5464528.1 hypothetical protein F2P56_014601 [Juglans regia])

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-22
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0

Query: 233 SGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFR 292
           + IY  P+  L+  +W+L+K LC D   PW+V GDFN IL  HE  GG  + E +L  FR
Sbjct: 105 TAIYGFPETHLRHHSWNLIKSLCRDNDKPWLVLGDFNKILHAHEKSGGNPRPERQLRDFR 164

Query: 293 DAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW 336
           + +D C L DLG+ G  FTW NRR G + + ER+DRCL N  W
Sbjct: 165 EVVDVCRLRDLGYLGPKFTWSNRRAGDKCIRERLDRCLVNSEW 207

BLAST of Lag0028932 vs. NCBI nr
Match: KAG6703462.1 (hypothetical protein I3842_07G085800 [Carya illinoinensis])

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-22
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 0

Query: 214 ENVSDEEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILF 273
           ENVS   K  +        +G Y +  A  + R+W LL+ LC      W+V GDFN ILF
Sbjct: 94  ENVSKSLKYFI--------TGFYGNLDASQRWRSWDLLRSLCHRDDEAWLVFGDFNEILF 153

Query: 274 HHENDGGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNM 333
            HE   GRD+S++++N FR  +D CSL D+GF+G  +TWCN R     V ER+DR  GN 
Sbjct: 154 SHEKLAGRDRSQSQMNDFRQTVDACSLWDIGFRGPKYTWCNGRDPESRVCERLDRFFGNS 213

Query: 334 AWQVV---EESWQSGAAEVSPVGLMMATE 360
            W V+    E    GAA    + + +A+E
Sbjct: 214 RWWVLFPQAEVVHGGAAYSDHIPISLASE 234

BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2I4EA22 (uncharacterized protein LOC108987722 OS=Juglans regia OX=51240 GN=LOC108987722 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.4e-23
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 233 SGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFR 292
           + +Y  P+  L+ ++WSLLK LC  P  PW+V GDFN +L  HE  GG  + E +L+ FR
Sbjct: 105 TALYGFPETHLRHQSWSLLKSLCRAPDEPWLVLGDFNELLSAHEKSGGNPRPEKQLSAFR 164

Query: 293 DAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW 336
           + +D C L DLGF G M TW NRR G + + ER+D CL N  W
Sbjct: 165 EVVDVCRLRDLGFSGPMLTWSNRRAGDKCIRERLDHCLVNSMW 207

BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2I4DZH7 (uncharacterized protein LOC108984903 OS=Juglans regia OX=51240 GN=LOC108984903 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-22
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0

Query: 233 SGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFR 292
           + IY  P+  L+  +W+L+K LC D   PW+V GDFN IL  HE  GG  + E +L  FR
Sbjct: 105 TAIYGFPETHLRHHSWNLIKSLCRDNDKPWLVLGDFNKILHAHEKSGGNPRPERQLRDFR 164

Query: 293 DAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW 336
           + +D C L DLG+ G  FTW NRR G + + ER+DRCL N  W
Sbjct: 165 EVVDVCRLRDLGYLGPKFTWSNRRAGDKCIRERLDRCLVNSEW 207

BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9IXK4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.9e-22
Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 0

Query: 216 VSDEEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHH 275
           + DE +   W +     +G Y  P+   +  +WSLL+ L    + PW   GDFN +L + 
Sbjct: 408 IIDEGEPNSWRF-----TGFYGAPETHRRHESWSLLRLLHSQSSLPWCCMGDFNELLSYE 467

Query: 276 ENDGGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW 335
           E  GG  +S  ++  FRDAID C   DLGF G  FTWCN RLG  TVWER+DR L   +W
Sbjct: 468 EKQGGPIRSHRQMQDFRDAIDHCGFEDLGFNGPPFTWCNNRLGSHTVWERLDRVLATTSW 522

BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9ESR2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-21
Identity = 69/199 (34.67%), Postives = 93/199 (46.73%), Query Frame = 0

Query: 170 KWKKRARGVLMDVTNTVDTTEGLGPKRKSPSCAPGSNGSKKARGENVSDEEKVVVWHYYG 229
           KWKK AR      +N V       PKR  P         KK         ++VV   Y G
Sbjct: 368 KWKKLARA---QTSNVVGPDHIQSPKRSVPHADESLAQLKK---------QEVVPNQYEG 427

Query: 230 IPRSGIYRH---------PQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGG 289
              +    H         P++ L+  +W+LL+ + G    PW   GDFN I+ + E  G 
Sbjct: 428 SEMAIRIIHGDLPVFMAAPESHLRENSWNLLRTINGQNNIPWCCAGDFNEIVRNSEKSGR 487

Query: 290 RDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW----- 349
           R ++E ++ GFRD ID C  VDLGF+G  FTWCN RLG  T W R+DR +    W     
Sbjct: 488 RPQNERQMQGFRDVIDECGFVDLGFRGLPFTWCNNRLGNNTTWLRLDRFMATNDWVLRFN 547

Query: 350 QVVEESWQSGAAEVSPVGL 355
           Q V    +S A++  P+ L
Sbjct: 548 QAVVYHLESSASDHKPLWL 554

BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9I9F4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50479 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-21
Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 0

Query: 236  YRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFRDAI 295
            Y  P++ L+  +W+LL+ + G    PW   GDFN I+ + E  G R ++E ++ GFRD I
Sbjct: 1026 YGAPESHLRENSWNLLRTINGQNNIPWCCAGDFNEIVRNSEKSGRRPQNERQMQGFRDVI 1085

Query: 296  DTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAW-----QVVEESWQSGAAEVS 355
            D C  VDLGF+G  FTWCN RLG  T W R+DR +    W     Q V    +S A++  
Sbjct: 1086 DECGFVDLGFRGLPFTWCNNRLGNNTTWLRLDRFMATNDWVLRFNQAVVYHLESSASDHK 1145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042988702.14.1e-2340.94uncharacterized protein LOC122316234 [Carya illinoinensis][more]
XP_018816246.19.2e-2347.57uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical ... [more]
KAF5449841.11.2e-2243.33hypothetical protein F2P56_030246 [Juglans regia][more]
XP_018812547.12.7e-2247.57uncharacterized protein LOC108984903 [Juglans regia] >KAF5464528.1 hypothetical ... [more]
KAG6703462.12.7e-2240.27hypothetical protein I3842_07G085800 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2I4EA224.4e-2347.57uncharacterized protein LOC108987722 OS=Juglans regia OX=51240 GN=LOC108987722 P... [more]
A0A2I4DZH71.3e-2247.57uncharacterized protein LOC108984903 OS=Juglans regia OX=51240 GN=LOC108984903 P... [more]
A0A2N9IXK44.9e-2242.50RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 ... [more]
A0A2N9ESR21.4e-2134.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1[more]
A0A2N9I9F45.4e-2141.13Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 208..365
e-value: 5.2E-13
score: 51.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 220..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..215
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 235..335
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 235..335

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028932.1Lag0028932.1mRNA