Lag0028932 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGTAATGAGGAGGAGATTTGATGCCCGATCCTTTATGAGAGACTTCCTGACTTCTGTTACAATTGTGGACGATTAGGCCACTCGAGGAGGGAGTGTGTGCATGAAATGGTGGATGGTGGACATGGGGTTAAGGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGTTTGTCCTGAGTTGGTATCTGCTGAAAATGTGGAGGTGGCTGGAGACCAGCCTCGCCAGTCATTATGAGTATGCTTTTTTGGAATGCACGAGGTATGGGGTCGGATCGTGCATTCCATAAGTTGCATAAGTTAGTGCAACAACAACGACCTCTGTTGGTGTTCCTTTCAGAAACAAAGGTGCACTCTTCACGTTTTGAGATGATAAAAGTTAAATTGGGTTTTGATGGTTGCTTTAGTGTTGTTAGTGCAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGTTTAGTCTTATTTCTTACTCACCGAATCATATTGATGGGTGGGTGGATTGGAACTTGACCTAGTGGCGTTTAACAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGTAGAACCTTTTTCCCCAGCAGGAGGTTACCCACCTGGACTTTAGCAGATCAGATCACCGACCGGTATTGCTCTCGTTACTCTCGCCATCTCAGTTGGGAGAGGGGTGTGGGCGTAGGATCCATCGCTTTGAGGATGTCTGGTTGATGTATCCTTAGTTCAGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA ATGGCGGCTATGCTGGGCGAGAAGATAGGGCGGGTAGAGGAGGTGTATGGGTCGGAGGAAAATGAGTGGTTTGGGCCGATCTTGAGACTTCGGGTTTGCTTGAATTTGGATCGTCCGTTGCGAAAGGGCTTCAAACTCCAAGTCAGGTCAGTATGGAGAATGGATGAGGGTAGGGATGTTGGTGGGAGAGGTAGGGAAGAGGGGGCGGAAGAGAAGAAGGAGAGCCTAAGTCCTGATAGGGAAGGGGCGAATGGGGATGAGGGAGGGGAAAGTTTTGGTCTGGGGGTTGACGTTGGGAGTGGGGGGCAGTCTGGTGCAGGGGTAGAGGGAGGGGAAGTGAATGATATAGGAGATCCGGAGGCTCAGGTCAGTTTGAAGGGGAATGAGAAAGTGGGGCTGGGGGAGACATCGGGTGTGAGTGGGAGTGTGGGAGTGATGGAGGTGGATGGGGTGGAGGATAACCAGGCTGAAGGGTGTTCTGAGGTAGAAAGGATACAGAAAGGGAAAAAGTGGAAAAAGAGAGCTCGGGGTGTGTTGATGGATGTCACGAACACTGTTGATACTACGGAGGGTTTGGGTCCCAAACGAAAGTCTCCAAGTTGCGCCCCTGGCTCTAATGGGTCCAAGAAAGCTAGAGGTGAGAATGTATCTGATGAGGAAAAAGTGGTGGTTTGGCATTACTATGGGATTCCACGGTCAGGCATCTACAGACATCCGCAAGCAAAACTGAAACCGAGAACTTGGTCCCTCCTGAAGCATCTTTGTGGTGATCCTGCTACGCCATGGATTGTGGGAGGGGATTTTAATGCTATATTGTTCCACCATGAGAATGATGGGGGTAGAGATAAATCTGAAGCTGAGTTGAATGGGTTTCGGGATGCAATTGATACATGTAGTCTTGTGGACTTGGGATTTAAAGGAGATATGTTCACATGGTGCAACAGGCGTCTTGGGGGTGAGACAGTGTGGGAGCGAATTGACCGATGTCTTGGTAATATGGCTTGGCAAGTAGTGGAGGAATCTTGGCAGTCAGGCGCAGCTGAAGTTTCGCCGGTAGGGTTGATGATGGCTACTGAACATTGTCTAGCTTCACTAGTTAAGTGGGGCAGAGGGAAGGTTGGGAGATATGGTGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA MAAMLGEKIGRVEEVYGSEENEWFGPILRLRVCLNLDRPLRKGFKLQVRSVWRMDEGRDVGGRGREEGAEEKKESLSPDREGANGDEGGESFGLGVDVGSGGQSGAGVEGGEVNDIGDPEAQVSLKGNEKVGLGETSGVSGSVGVMEVDGVEDNQAEGCSEVERIQKGKKWKKRARGVLMDVTNTVDTTEGLGPKRKSPSCAPGSNGSKKARGENVSDEEKVVVWHYYGIPRSGIYRHPQAKLKPRTWSLLKHLCGDPATPWIVGGDFNAILFHHENDGGRDKSEAELNGFRDAIDTCSLVDLGFKGDMFTWCNRRLGGETVWERIDRCLGNMAWQVVEESWQSGAAEVSPVGLMMATEHCLASLVKWGRGKVGRYGVKDLEFPIPLQRKQLDRS Homology
BLAST of Lag0028932 vs. NCBI nr
Match: XP_042988702.1 (uncharacterized protein LOC122316234 [Carya illinoinensis]) HSP 1 Score: 120.2 bits (300), Expect = 4.1e-23 Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 0
BLAST of Lag0028932 vs. NCBI nr
Match: XP_018816246.1 (uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical protein F2P56_019199 [Juglans regia]) HSP 1 Score: 119.0 bits (297), Expect = 9.2e-23 Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Lag0028932 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia]) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-22 Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Lag0028932 vs. NCBI nr
Match: XP_018812547.1 (uncharacterized protein LOC108984903 [Juglans regia] >KAF5464528.1 hypothetical protein F2P56_014601 [Juglans regia]) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-22 Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of Lag0028932 vs. NCBI nr
Match: KAG6703462.1 (hypothetical protein I3842_07G085800 [Carya illinoinensis]) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-22 Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2I4EA22 (uncharacterized protein LOC108987722 OS=Juglans regia OX=51240 GN=LOC108987722 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.4e-23 Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2I4DZH7 (uncharacterized protein LOC108984903 OS=Juglans regia OX=51240 GN=LOC108984903 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-22 Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9IXK4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.9e-22 Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 0
BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9ESR2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-21 Identity = 69/199 (34.67%), Postives = 93/199 (46.73%), Query Frame = 0
BLAST of Lag0028932 vs. ExPASy TrEMBL
Match: A0A2N9I9F4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50479 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.4e-21 Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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