Lag0028906 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028906
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr8: 32652981 .. 32655758 (+)
RNA-Seq ExpressionLag0028906
SyntenyLag0028906
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTGATATCACTGCAAGCGAATTTGGTGACGACTGTTGCACGAAGCTTACACATTCAAGGAAAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGAAAATTAAAAAAAAAATAAAAATAAAAAAACGAAAAGTATAAAAAAAAGCGAAAATTAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGTTTCCTACTTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGCTCTCCCCTGCTGAGGTTCAACCTTATTTATAGAATGGAAGGTTGGATTCAAATAGATAAATCTTATCTCCAACGATAATCTTTATCAATTTTGGGATGAGTTCAAATATATATCTTATCTCCAACGACAATCTTCATCAATTTTGGGATAAGTTCAAATATAAATCTTATCTCCAACGGAAATCTTCATCAATTTTGGGATGGGTTCAAATATAAATCTTATCTCCAACGGAAATCTTCATCAATTTTTGAAGGGTTTGAATATAAATCTTATCTCCAACAAGAGTCTTTGGTTCAAATTTTAACCCAAAGATATGAGATTTGATTTAAATCAAATTGGGAAATAAATTTTATTCCAAATTCCCACCAAATTTTGGGATGCAGCCTTAAATTTACTTAAATTAAATTTTGGGCATAATCCAAATTTTATCCCAAATGAACCAAAGTCAAAACCTCAAATTCTATTCCAAATGCGAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAACCAAATTTTGCCCAAACTTGAAATCAAAGTTTGTTGCCAAATAAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTCGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAGTTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAGTTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTCAGGGTGGGGATTCAGATTCGGGGAGTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGACTCAAAATTCAAAGGATTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACATGCCGATCATCCAACAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACCGACCGATCAAGAAGATCAGCAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAACAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCTGATCATCTAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGGAGATCAATAAGCCAAACGATCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACGGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCCCAACAAACCGGCCCAAGAAGAGCAACAAGCTAGAGGCCAAAGTTTATATATTTAA

mRNA sequence

ATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGGTGGGGATTCAGATTCGGGGAGTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGACTCAAAATTCAAAGGATTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACATGCCGATCATCCAACAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACCGACCGATCAAGAAGATCAGCAAATCATCAAGCCAACAGGCTGATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACGGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCCCAACAAACCGGCCCAAGAAGAGCAACAAGCTAGAGGCCAAAGTTTATATATTTAA

Coding sequence (CDS)

ATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGGTGGGGATTCAGATTCGGGGAGTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGACTCAAAATTCAAAGGATTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACATGCCGATCATCCAACAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACCGACCGATCAAGAAGATCAGCAAATCATCAAGCCAACAGGCTGATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACGGACCGATCAAGAAGATCAACAAGTCATCAGGCCGATCATCCAAGAGATCATCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCCCAACAAACCGGCCCAAGAAGAGCAACAAGCTAGAGGCCAAAGTTTATATATTTAA

Protein sequence

MKANLVTTPAGYSDHPIKWGLGLAGVHEGESGDYPCRVGIQIRGVSQRQRGQSPEHSPKIHSRQNPKSPENSEIRDSKFKGFKTQKIGRLEDSKKRSTSQPTDQEDQQVNMPIIQQDQQANKSIQQINKPTDRSRRSANHQANRLIQEDQQANRPIKKINKSVGRSSKKRSTSQPTDQEDQQADHPRDQQANRPIKKINKSSGRSSKRSSSQRTDQEDQQVIRPIIQEIIKPTDRSRRSTSQQADHRTDHQANRPIQEIIKSAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKKINKPTDRTDHQANRPIQEIIKSAGRSSKRINKLTSRSNRSSSQQADPRDHQVSRPIIQEDQQANKLIQEIINLASRSSKKPNKPAQEEQQARGQSLYI
Homology
[Close]
BLAST of Lag0028906 vs. NCBI nr
Match: KAF6734224.1 (hypothetical protein FQA47_013229 [Oryzias melastigma])

HSP 1 Score: 73.6 bits (179), Expect = 4.5e-09
Identity = 81/247 (32.79%), Postives = 127/247 (51.42%), Query Frame = 0 

Query: 96  RSTSQPTDQEDQQVNMPIIQQDQQANKSIQQINKPTDR-SRRSANHQANRLI--QEDQQA 155
           + T++PT   DQQ + P  QQ  +  K+ QQ NKPT+R + R  N Q +R    Q  +  
Sbjct: 31  QQTNKPT---DQQTDRPTNQQTNRPKKN-QQTNKPTNRQTNRPTNQQTDRPTNQQTKKPT 90

Query: 156 NRPIKKINKSVGRSSKKRSTSQPTDQE---DQQADHPRDQQANRPIKKINKSSGRSSKRS 215
           NR   K+          + T++PT+Q+   +QQ + P ++Q NRP K  N+ + R  K +
Sbjct: 91  NRQTNKLTDQQTNKPTNQQTNKPTNQQTKKNQQTNKPTNRQTNRPKKPTNRQTNRPKKPT 150

Query: 216 SSQRTDQEDQQVIRPIIQEIIKPTDRSRRSTSQQADHRTDHQANRPIQEIIKSAGRSSKR 275
           + Q     +QQ  RP  Q+  KPT    + T QQ +   + Q N+P         R + R
Sbjct: 151 NRQTNRPTNQQTDRPTNQQTDKPT----KPTDQQTE--KNRQTNKP-------TNRQTNR 210

Query: 276 INKLTSR-SNRSSSQQAD-PRDQQANRPIKKINKSAGR---SSKKINKPTDRTDHQANRP 332
             K T+R +NR ++QQ D P +QQ N+P  + N+   R   + K+ N+ TD+TD   +R 
Sbjct: 211 PKKPTNRQTNRPTNQQTDRPTNQQTNKPTNRQNRQTNRPKKTDKQTNQQTDKTDKPTDRK 260

[Close]
BLAST of Lag0028906 vs. NCBI nr
Match: RUS92128.1 (hypothetical protein EGW08_000152 [Elysia chlorotica])

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-05
Identity = 70/190 (36.84%), Postives = 100/190 (52.63%), Query Frame = 0 

Query: 98  TSQPTDQEDQQVNMPIIQQDQQANKSIQQINKPT-DRSRRSANHQANRLIQEDQQANRPI 157
           T++PT   DQ+ N P  QQ  +     QQ N+PT  ++ R A+ Q NR    DQQ NRP 
Sbjct: 65  TNRPT---DQRTNRPTGQQTNRPTD--QQTNRPTGQQTNRPADQQTNR--PADQQTNRP- 124

Query: 158 KKINKSVGRSSKKRSTSQPTDQEDQQADHPRDQQANRPI-KKINKSSGRSSKRSSSQRTD 217
                        + T++PT   DQQA  P DQQANRP  ++ N+ + + + R + Q+T 
Sbjct: 125 -----------ADQQTNRPT---DQQASRPTDQQANRPTGQQTNRPTDQQTNRPTDQQTS 184

Query: 218 Q-EDQQVIRPIIQEIIKPTD-RSRRSTSQQADHRTDHQANRPIQEIIKSAGRSSKRINKL 277
           +  DQQ  RP  Q+  +P D ++ R T QQ +  TD Q NRP   ++     SS R+ ++
Sbjct: 185 RPADQQTNRPTDQQTNRPADQQTNRPTDQQTNRPTDQQTNRPTLPVLLI---SSDRLTRV 229

Query: 278 TS--RSNRSS 282
           T   RS R S
Sbjct: 245 TGAVRSRRHS 229

[Close]
BLAST of Lag0028906 vs. ExPASy TrEMBL
Match: A0A433UEB9 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_000152 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-05
Identity = 70/190 (36.84%), Postives = 100/190 (52.63%), Query Frame = 0 

Query: 98  TSQPTDQEDQQVNMPIIQQDQQANKSIQQINKPT-DRSRRSANHQANRLIQEDQQANRPI 157
           T++PT   DQ+ N P  QQ  +     QQ N+PT  ++ R A+ Q NR    DQQ NRP 
Sbjct: 65  TNRPT---DQRTNRPTGQQTNRPTD--QQTNRPTGQQTNRPADQQTNR--PADQQTNRP- 124

Query: 158 KKINKSVGRSSKKRSTSQPTDQEDQQADHPRDQQANRPI-KKINKSSGRSSKRSSSQRTD 217
                        + T++PT   DQQA  P DQQANRP  ++ N+ + + + R + Q+T 
Sbjct: 125 -----------ADQQTNRPT---DQQASRPTDQQANRPTGQQTNRPTDQQTNRPTDQQTS 184

Query: 218 Q-EDQQVIRPIIQEIIKPTD-RSRRSTSQQADHRTDHQANRPIQEIIKSAGRSSKRINKL 277
           +  DQQ  RP  Q+  +P D ++ R T QQ +  TD Q NRP   ++     SS R+ ++
Sbjct: 185 RPADQQTNRPTDQQTNRPADQQTNRPTDQQTNRPTDQQTNRPTLPVLLI---SSDRLTRV 229

Query: 278 TS--RSNRSS 282
           T   RS R S
Sbjct: 245 TGAVRSRRHS 229

The following BLAST results are available for this feature:
BLAST of Lag0028906 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF6734224.14.5e-0932.79hypothetical protein FQA47_013229 [Oryzias melastigma][more]
RUS92128.14.0e-0536.84hypothetical protein EGW08_000152 [Elysia chlorotica][more]
BLAST of Lag0028906 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0028906 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A433UEB91.9e-0536.84Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_000152 PE=4 SV=1[more]
BLAST of Lag0028906 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..358

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028906.1Lag0028906.1mRNA