Lag0028896 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028896
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr8: 32484176 .. 32488746 (+)
RNA-Seq ExpressionLag0028896
SyntenyLag0028896
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAAAATAATACATGCTTGGTGTAAGTGATGCATGCCCAGCAGCAGCAAAGAAAACCAAAACCAAAACCCTAAAACCACACTCTTACAAATCCCCTAATAAAGGCTTTGCTTGTATGCATCTCTTACAGCCCCATGTCTTCAGCACTAAAAAAAACTACAAAAGAAAAATTATATTTGAACATTACAAAAAAAAAAAAAAAAAAACACAATAATTTCGGACCATTTCCCTCAATTCCCCTGTGCAATGCAATTTCATAAAACGCTCTCCCAACTCCCTGAATCTGCCTTGTTTTGAAAGCTGGGAAACTCAGGAGAGGGCTATTGCAAAGCTCTGGTTTTTCTTCTTTTTTCTTTGCATATTTTTCTCATGCTTTCTTCACCAACATAATTCCCTCCTTATCTACAAAATTACAAACCATCTTCGTCGCTTTTGTCCCTCCGCTTCTACCGCTGGTTGTCACCGCCGACGAGCTCTCGTCGGCCGTGGCGCCATTACAATGGTTTGCTATGAAGCTTGAACTTTTCATTGTTGGGAAGAAGAAGAAAGAAGAGAGGTATGGTTTGGGCTATGGGAAGGACACAGTTGGAGTTTATATAAAGGCAAAGGTTGAAGCTTTTTCAAAAAAAAAAAAAAAAAAAAAAATACGCATATATAATGGTGAGCCAAGAGAAAAGGGATTTTTTAGTTGGGAAGGAGATTCAAATATAGATCTTTTATTCAGCTTTAACCAACTGAATTATGTTTAGGTTGTCAAGTTGGGAGAGAAACTTTAAAATCTCATTTTGGTGTCTCTAAAGTTAATTCTTGAACTTCACATATTTAAGACTCCGTTTGATAATCATTTCATTTTTAAAAATTAAGCTTGTTTTCTTTCAATTTTCTTATCATGGTTTTTCATCTTTATTAAGAAAACATTTGAATTATTCTTAGCTGAATTCCATTCTAAAAACTACTTTTTTAGTTTTCAAAACTTAATTTGATTTTCGAAAATATAGAAAGAACTAAAAAGGTAGATAACAAAACAAAAAAACTTGTAGGTGAAAGTAGTATTTATATGCTTAATTTTCAAAAAAAAAAAAAAAAAAAAAAAACCAAATAGTTATCAAACATAACTTAATAATTTATTAAATAAACTTAGACATACATATTTCTTTTCCTTAGACAAGTATTATTTGAACTTACATCATTACATTCTCAAATAAACTTTGAGTTTTTTTTTTTTGTTAAATGATTAATGAAAAACAACCCCAAGAACTAAAATATATACTTATACAGTTATACTTGTTTTGTGTAGAATTTATGGACAAGAACATAAACCTTAAAAAGACAAGAAAAAAAAAAAAAAAGTAGAGTAGCTAGTTGAAGATTTAAATAAGATTTGAACAGTATTTTATCTTAAAAGTGGGGTTGAATTTTTGGGATGAATGAAATGAGGTTTAGGGCATGTTTGTGGAGAATGCAAAAAAATTCCACTAACTCGATTTCCAAGGCTCTTGGAATTATCATGTCATGGGCAAAAGAGGAGGGTTACAGCTCGAGGACAATTTTTTTTTTTTTTTAATTAAAAGAAAATTTTAATTTAATTTTATTTATTTAGAAAAGAAAAATAAAAAGAGGTGAACTTTTTGGTTTTATTAGGTTATTATTGGGTGGTGGTGATGGGAATTGATTGGTGGGTCATTTGACATGAAACTGTGTGGGAATTTTTATTCCCCAAAGTGGACCATTAATTCCACTAACCAAACACACCCAATTAAGGTGTGAATTTTGGCAGTTGATTGAGCCATTGATTGACATAACTTTCTATATTTTCAAACCTACAACCAAAAGATAATCATTTTTCTGCATGCTTGTTCCAATCTTTATGTTTCAACACTACAACATTGTCAAGATTTTGTTTTAGGATAATGTTTCTCTTTTGTGTTGCTAGGATTATTTCAAAAGTTGTTTGATACAACTTTGATTTCTTTAATTAAATTATTAATTTACCTCTTAATCTTTCCATAGTTGTATTTACTTAGTTTTTAAACTTTTAGGCAAAGACGTCCAAGTAACAAAGTAAAGCGTTGCTAAAATTGGTACCTAAAGAGCAAATATCATTTGATAATGAATGACTACGACTCCATGTTTTGAGCCACTAGTCACCATTGAGGGCGGCATTAGCTAGCAAAATGCTTGACCAATTGATAATTTGGATCCTTAAAGCCTTGTTTGATACTCATTTGGTTTTAGAAAATTATGTTTGTTTTCTCTAAAATTCCTTACAATAATTTTTATCTTTATTGTTAATGAGACATTTGAGTTCTTAGCCAAATTCCAAAAAAAAAAAAAAAAAAGTTTTTGAAAACATGAGAAAGATGTAGACAACAAAACAAAGAAACTTGTGGGTGAAACTAATGTTTATAAGCTTAATTTTCAAAAACCAAAAACAAAAAACGGCCCCATTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTGTGAAAATTAAGCTTATATACACACATACTTCAACCTATAAGTTTCTTGGTTTTAGTATTAATCTTCTACCTTGTTTTCAAAAACCAAGTCCAATTTTGGAAACAGAAAAAAAAAGTATTTTTAAAAGCTTGTTTTTGTTTTTAAAATTTGGCTAGGAATTCAAATGCAATTTTAGTTAGGATGAAAGCCATGATAGGGAATTTAGGAGAAAACAAGTATAATTTTCAAAAACAAAAAATCAAAAATCAAATGGTTATCAAACGGGGGCTTATCAAACGAGGTTGTAGTTTTCAAAAACTTGTTTTTGTTTTTGAAATTAGGCTAGGAATACAAATGTGTCTTTAATTAACAAAGATGAAAACTATTGAAAAGAAATGGAGAGAAACCGAACATAAGTTTCAAAAATTAAAAACAAAAAGCCAAATGATTATTAAATAGGACCTTAATTTTAGCAACACGAACAAAACCTCTCAGGGGATAATAACAAATGACTAAGTTGAGTCACCTGAAAATCCTCACCGTAACAATCTCTTTTTGTTTGTTTCATTTTTTCTCATTGAATTCTCATCGCACATCTACCTTCTATCTACCTTATATACTTTCTTTCACTAATATCTCTTTCTAGAATTGTTGTAGTTTCTAAAATAATATTGTCGGTTGTGCTTTAAAGAAAATCAATAGCAGTACAAAGTAAATTAATATTGAATAGTTTTAGCTTAAGATGAAAAACCAGGTTTAGGTATTTGATAAATTAATACTAATTTATTGTAGCTGTTGAAGGAGAAATTTTGGCCAATCACAAATTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAGTTACACATTTACATGTGTCTCTAGACTAAATTAATAGACATTAAAATTCGGAAAATCAAACTATGCCACTTGTCTATTATTGATCCATCGGATGACATAAGCCGAGTCCAATCAAATTATGCCACGTGGCAATTGGACCCAAGACTAATGTGACCCGAGATCATCAAAGAAATTGGGCTAAAATAATCCAATTTTATTAAAATGAATTGGATTAAAGCCCAAAGGAGCCAAAGCCCAAAGGTTGGGCCCAGGCCCAAGCCCATATGAGGTCCACCAAACTCTATAAATAGAGGAGGTCACCATTCATTTTGAGGGATTCAGATTCGGAGATTCAGATCAGAGAACTCAGAGTCGAGAGAATTCTGTCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCTAGATTCAGAATTCAACCAACTTAAGACTCAGAAGGTTTGAAGATTAGAAGACTCTAAGAAGAGATCAATAAGCCAACCGACCGATCGAGAAGATCAACAAGTCAGCAGGCCGACCATCCAAGAAGAGATCAGCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAAGAGATCAGCAAGTCAACCGACCGATCAAGAAGATCAACGAGTCAGTAGGCCGATCATCCAAGGAGATCAATAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCAATAAGCCAATCGACCGATCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAGATCAACAAGCCAACAGGCCGATCATCCGAGAAGATCAACAAGTCAGCAAACTGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCGATCATCCAAAAGATCAACAAGCAACAGACTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAATAG

mRNA sequence

ATGATGAAAAATAATACATGCTTGGTGAGAGGGCTATTGCAAAGCTCTGGTTTTTCTTCTTTTTTCTTTGCATATTTTTCTCATGCTTTCTTCACCAACATAATTCCCTCCTTATCTACAAAATTACAAACCATCTTCGTCGCTTTTGTCCCTCCGCTTCTACCGCTGGTTGTCACCGCCGACGAGCTCTCGTCGGCCGTGGCGCCATTACAATGGTTTGCTATGAAGCTTGAACTTTTCATTGTTGGGAAGAAGAAGAAAGAAGAGAGATTCGGAGATTCAGATCAGAGAACTCAGAGTCGAGAGAATTCTGTCAGAGTCCAGAGTCATCAGAAATCAATAAGCCAATCGACCGATCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAGATCAACAAGCCAACAGGCCGATCATCCGAGAAGATCAACAAGTCAGCAAACTGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCGATCATCCAAAAGATCAACAAGCAACAGACTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAATAG

Coding sequence (CDS)

ATGATGAAAAATAATACATGCTTGGTGAGAGGGCTATTGCAAAGCTCTGGTTTTTCTTCTTTTTTCTTTGCATATTTTTCTCATGCTTTCTTCACCAACATAATTCCCTCCTTATCTACAAAATTACAAACCATCTTCGTCGCTTTTGTCCCTCCGCTTCTACCGCTGGTTGTCACCGCCGACGAGCTCTCGTCGGCCGTGGCGCCATTACAATGGTTTGCTATGAAGCTTGAACTTTTCATTGTTGGGAAGAAGAAGAAAGAAGAGAGATTCGGAGATTCAGATCAGAGAACTCAGAGTCGAGAGAATTCTGTCAGAGTCCAGAGTCATCAGAAATCAATAAGCCAATCGACCGATCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAGATCAACAAGCCAACAGGCCGATCATCCGAGAAGATCAACAAGTCAGCAAACTGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCGATCATCCAAAAGATCAACAAGCAACAGACTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAATAG

Protein sequence

MMKNNTCLVRGLLQSSGFSSFFFAYFSHAFFTNIIPSLSTKLQTIFVAFVPPLLPLVVTADELSSAVAPLQWFAMKLELFIVGKKKKEERFGDSDQRTQSRENSVRVQSHQKSISQSTDQEDQQANKPIRQIIKPIDRSRRSTSQQTDHPKDQQANRPIIREDQQVSKLIIKPIIREDQQVNRPIIQEDQQANRRSSKRSTSNRLIIQEDQQVSKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGRSKRSLSRQADHPRRSSSQ
Homology
[Close]
BLAST of Lag0028896 vs. NCBI nr
Match: RUS92128.1 (hypothetical protein EGW08_000152 [Elysia chlorotica])

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-05
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 0 

Query: 122 DQQANKPI-RQIIKPID-RSRRSTSQQTDHPKDQQANRPIIREDQQVSKLIIKPIIREDQ 181
           DQ+ N+P  +Q  +P D ++ R T QQT+ P DQQ NRP    DQQ ++         DQ
Sbjct: 70  DQRTNRPTGQQTNRPTDQQTNRPTGQQTNRPADQQTNRP---ADQQTNR-------PADQ 129

Query: 182 QVNRPIIQE-----DQQANR---RSSKRSTSNRLIIQEDQQVSKPIIREDQQVSRPIIQE 241
           Q NRP  Q+     DQQANR   + + R T  +     DQQ S+P    DQQ +RP    
Sbjct: 130 QTNRPTDQQASRPTDQQANRPTGQQTNRPTDQQTNRPTDQQTSRP---ADQQTNRP---T 189

Query: 242 DQQANRPIIQEDQQVTTGRSKRSLSRQADHP 263
           DQQ NRP  Q+  + T  ++ R   +Q + P
Sbjct: 190 DQQTNRPADQQTNRPTDQQTNRPTDQQTNRP 204

[Close]
BLAST of Lag0028896 vs. ExPASy TrEMBL
Match: A0A433UEB9 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_000152 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.7e-06
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 0 

Query: 122 DQQANKPI-RQIIKPID-RSRRSTSQQTDHPKDQQANRPIIREDQQVSKLIIKPIIREDQ 181
           DQ+ N+P  +Q  +P D ++ R T QQT+ P DQQ NRP    DQQ ++         DQ
Sbjct: 70  DQRTNRPTGQQTNRPTDQQTNRPTGQQTNRPADQQTNRP---ADQQTNR-------PADQ 129

Query: 182 QVNRPIIQE-----DQQANR---RSSKRSTSNRLIIQEDQQVSKPIIREDQQVSRPIIQE 241
           Q NRP  Q+     DQQANR   + + R T  +     DQQ S+P    DQQ +RP    
Sbjct: 130 QTNRPTDQQASRPTDQQANRPTGQQTNRPTDQQTNRPTDQQTSRP---ADQQTNRP---T 189

Query: 242 DQQANRPIIQEDQQVTTGRSKRSLSRQADHP 263
           DQQ NRP  Q+  + T  ++ R   +Q + P
Sbjct: 190 DQQTNRPADQQTNRPTDQQTNRPTDQQTNRP 204

The following BLAST results are available for this feature:
BLAST of Lag0028896 vs. NCBI nr
Match NameE-valueIdentityDescription
RUS92128.11.2e-0538.41hypothetical protein EGW08_000152 [Elysia chlorotica][more]
BLAST of Lag0028896 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0028896 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A433UEB95.7e-0638.41Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_000152 PE=4 SV=1[more]
BLAST of Lag0028896 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..268

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028896.1Lag0028896.1mRNA