Lag0028805 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0028805
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr8: 30916204 .. 30917028 (+)
RNA-Seq Expression	Lag0028805
Synteny	Lag0028805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCAGCCGTAGCTACCGATGTGGTTAACTTCAGAACCTCAAGAGAGGTGTGGAAGGCTTTAGAGGAAGTTTATGGAGCAACCAATAAGGCAAGAGTGAATCACCTCCGTGGGATTCTTCAAAATACCAAAAATGGCTCAATGAAAATGATCGAGTACCTCGCGATAATGAAGCAGGCATCCGAAAATCTCCAGTTGGCAGTAATCCTGTTTCCTTAGGTGATCTGATTTCGTATGTCTTGGCGGGTTTAGATTCCGAATATGTACCGATTTTGTGCACAATCGAAGACAAGACATCCATACTTGGCAAGAACTAGCCTCTATCCTAATCAACTTCGAAGGAACCCTAGCTCGATATGGAATCACTAATAACTCTAATGATTCATCTGATTTAGCAGCTCATTTTGCATCAAATAGACAGGACAATACTCTGGACATAAGCAATTTAGTCCGAACAGAGGCAGCAACAGCCAGGGTAATGGCCCATCTAACTTTAATAATAACTCTGGCTTTCGAGGTGGTAACAACAACAATCGGGGCCGTGGTAGAGGAAGGAACAACCAGCGAGGAGGTGGACCCAAGCCAACATGCCAGTTATGTGGAAAATACGGCCACTTAGCACCATACTGCTATTCTCGCTTTGAGGAAGAATTCAACAATCCTTACTCTGCAAACAACAACACCCAAGGTAACTCTGCCAGAAGCTCCTCAGCAGCATACATTACCTCTCCTGAAATCCTCAACGATCCGAAGTGGCTAGCAGACAATGGAGCCACAAACCATGTCACTGCTGATCTGGGGAATATTGCCACAAAAAAATGA

mRNA sequence

ATGACACCAGCCGTAGCTACCGATGTGGTTAACTTCAGAACCTCAAGAGAGGTGTGGAAGGCTTTAGAGGAAGTTTATGGAGCAACCAATAAGGCAAGAGTGAATCACCTCCGTGGGATTCTTCAAAATACCAAAAATGGCTCAATGAAAATGATCGAGTACCTCGCGATAATGAAGCAGGCATCCGAAAATCTCCAGTTGGCAACAGGACAATACTCTGGACATAAGCAATTTAGTCCGAACAGAGGCAGCAACAGCCAGGGTAATGGCCCATCTAACTTTAATAATAACTCTGGCTTTCGAGGTGGTAACAACAACAATCGGGGCCGTGGTAGAGGAAGGAACAACCAGCGAGGAGGTGGACCCAAGCCAACATGCCAGTTATGTGGAAAATACGGCCACTTAGCACCATACTGCTATTCTCGCTTTGAGGAAGAATTCAACAATCCTTACTCTGCAAACAACAACACCCAAGGTAACTCTGCCAGAAGCTCCTCAGCAGCATACATTACCTCTCCTGAAATCCTCAACGATCCGAAGTGGCTAGCAGACAATGGAGCCACAAACCATGTCACTGCTGATCTGGGGAATATTGCCACAAAAAAATGA

Coding sequence (CDS)

ATGACACCAGCCGTAGCTACCGATGTGGTTAACTTCAGAACCTCAAGAGAGGTGTGGAAGGCTTTAGAGGAAGTTTATGGAGCAACCAATAAGGCAAGAGTGAATCACCTCCGTGGGATTCTTCAAAATACCAAAAATGGCTCAATGAAAATGATCGAGTACCTCGCGATAATGAAGCAGGCATCCGAAAATCTCCAGTTGGCAACAGGACAATACTCTGGACATAAGCAATTTAGTCCGAACAGAGGCAGCAACAGCCAGGGTAATGGCCCATCTAACTTTAATAATAACTCTGGCTTTCGAGGTGGTAACAACAACAATCGGGGCCGTGGTAGAGGAAGGAACAACCAGCGAGGAGGTGGACCCAAGCCAACATGCCAGTTATGTGGAAAATACGGCCACTTAGCACCATACTGCTATTCTCGCTTTGAGGAAGAATTCAACAATCCTTACTCTGCAAACAACAACACCCAAGGTAACTCTGCCAGAAGCTCCTCAGCAGCATACATTACCTCTCCTGAAATCCTCAACGATCCGAAGTGGCTAGCAGACAATGGAGCCACAAACCATGTCACTGCTGATCTGGGGAATATTGCCACAAAAAAATGA

Protein sequence

MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQASENLQLATGQYSGHKQFSPNRGSNSQGNGPSNFNNNSGFRGGNNNNRGRGRGRNNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAYITSPEILNDPKWLADNGATNHVTADLGNIATKK

Homology

[Close]

BLAST of Lag0028805 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 113/276 (40.94%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MTP++A DVV+FR+SREVWKALE++YGAT+KAR+N LR +LQNTK  S+KM EYL +MKQ
Sbjct: 118 MTPSIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQ 177

Query: 61  ASENLQLA----------------------------TGQYS------------------- 120
           ASE+L+LA                             G+ S                   
Sbjct: 178 ASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMR 237

Query: 121 ---------------------------GHKQFSPNRGSNSQGNGPSNFNNNSGFRGGNNN 180
                                      G++QF  ++    QG G  N N+        NN
Sbjct: 238 LNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSND------AKNN 297

Query: 181 NRGRGRGR-NNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSS 202
            RGRGRGR +  RG   KP+CQLCGKYGH+A  CY RF+E FNN  S+NNN         
Sbjct: 298 VRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNN--------R 357

[Close]

BLAST of Lag0028805 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 113/276 (40.94%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MTP++A DVV+FR+SREVWKALE++YGAT+KAR+N LR +LQNTK  S+KM EYL +MKQ
Sbjct: 118 MTPSIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQ 177

Query: 61  ASENLQLA----------------------------TGQYS------------------- 120
           ASE+L+LA                             G+ S                   
Sbjct: 178 ASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMR 237

Query: 121 ---------------------------GHKQFSPNRGSNSQGNGPSNFNNNSGFRGGNNN 180
                                      G++QF  ++    QG G  N N+        NN
Sbjct: 238 LNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSND------AKNN 297

Query: 181 NRGRGRGR-NNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSS 202
            RGRGRGR +  RG   KP+CQLCGKYGH+A  CY RF+E FNN  S+NNN         
Sbjct: 298 VRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNN--------R 357

[Close]

BLAST of Lag0028805 vs. NCBI nr
Match: XP_022142770.1 (uncharacterized protein LOC111012809 [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-22
Identity = 93/254 (36.61%), Postives = 121/254 (47.64%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           M+P +A DV++  TSR+VWKALE++Y   NKAR+N L+  LQ T+   +KM +YL+ MKQ
Sbjct: 1   MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60

Query: 61  ASENLQLA--------------TGQYSGHKQ---------------------------FS 120
            ++ L LA              TG  + + Q                             
Sbjct: 61  LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120

Query: 121 PNRGSNSQGNGPS-NFNNNSGF------------RGGNNNNRGRGRGR--NNQRGGGPKP 180
            N  S +  +GPS N+  N               RG   N+RGR RG     QR    +P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180

Query: 181 TCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAYITSPEILNDPKWLAD 199
           TCQ+CGK GHLA  CY R     N  Y  N    GN A +   AYIT PE++ DP WL D
Sbjct: 181 TCQVCGKIGHLAVVCYHR----LNMQYMGNTPQGGNQAPN---AYITGPEVIIDPNWLID 240

[Close]

BLAST of Lag0028805 vs. NCBI nr
Match: XP_030492910.1 (uncharacterized protein LOC115709020 isoform X2 [Cannabis sativa])

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18
Identity = 81/269 (30.11%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MT A+AT+V+   T+  +WKALE +YGA +K++++  R  +Q T+ G+  M++YL   K 
Sbjct: 132 MTEAIATEVMGCTTAAALWKALENLYGAHSKSKMDDTRTAIQTTRKGNTSMVDYLRQKKA 191

Query: 61  ASENLQLATGQY------------------------------------------------ 120
            S+ L LA   Y                                                
Sbjct: 192 WSDVLTLAGDPYPEAHLISNVLSGLDASYLPIVLQIEARPSTTWQELQELLLSFDSKIER 251

Query: 121 -------------------SGHKQFSPNRGSNS-QGNGPSNFNNNSGFRGGNNNNRGRGR 180
                              + ++  S  RG+NS     PS  N +   RG  N +RGRGR
Sbjct: 252 LHNLNESSKHAAAPTANMANRYENSSRGRGNNSTHSPNPSRTNYSGNNRG--NGHRGRGR 311

Query: 181 GRNNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAYITS 202
           GR+N      KPTCQ+CGK+GH A  CY+R+ E F     ++ N   N  ++  +A+  S
Sbjct: 312 GRSNNNNN--KPTCQVCGKFGHSAAVCYNRYNEAF---MGSDPNLSQNQPKNPPSAFTAS 371

[Close]

BLAST of Lag0028805 vs. NCBI nr
Match: TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-17
Identity = 84/272 (30.88%), Postives = 119/272 (43.75%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MT  VA  V+   T+  +WKALE ++GA +K++ N +R  +Q T+ GS  M EYL  MK 
Sbjct: 122 MTENVALSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKT 181

Query: 61  ASENLQLATGQY------------------------------------------------ 120
            +++L +A   Y                                                
Sbjct: 182 WADSLAIAGDPYPENLLFANILAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEH 241

Query: 121 ------SGHKQFSP---------------NRGSNSQ--GNGPSNFNNNSGFRGGNNNNRG 180
                  G+   SP               N+ SN Q    G +   N  GFRGG    RG
Sbjct: 242 INNVSAKGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRG 301

Query: 181 RGRGRNNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAY 202
           RG GRNN      +PTCQ+CGK+GH A  CY R+++ +       +    NS  +S + +
Sbjct: 302 RG-GRNN----NSRPTCQVCGKFGHSASVCYFRYDDNY-----MGSVPTANSNANSPSVF 361

[Close]

BLAST of Lag0028805 vs. ExPASy TrEMBL
Match: A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.6e-39
Identity = 113/276 (40.94%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MTP++A DVV+FR+SREVWKALE++YGAT+KAR+N LR +LQNTK  S+KM EYL +MKQ
Sbjct: 118 MTPSIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQ 177

Query: 61  ASENLQLA----------------------------TGQYS------------------- 120
           ASE+L+LA                             G+ S                   
Sbjct: 178 ASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMR 237

Query: 121 ---------------------------GHKQFSPNRGSNSQGNGPSNFNNNSGFRGGNNN 180
                                      G++QF  ++    QG G  N N+        NN
Sbjct: 238 LNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSND------AKNN 297

Query: 181 NRGRGRGR-NNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSS 202
            RGRGRGR +  RG   KP+CQLCGKYGH+A  CY RF+E FNN  S+NNN         
Sbjct: 298 VRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNN--------R 357

[Close]

BLAST of Lag0028805 vs. ExPASy TrEMBL
Match: A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.6e-39
Identity = 113/276 (40.94%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MTP++A DVV+FR+SREVWKALE++YGAT+KAR+N LR +LQNTK  S+KM EYL +MKQ
Sbjct: 118 MTPSIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQ 177

Query: 61  ASENLQLA----------------------------TGQYS------------------- 120
           ASE+L+LA                             G+ S                   
Sbjct: 178 ASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMR 237

Query: 121 ---------------------------GHKQFSPNRGSNSQGNGPSNFNNNSGFRGGNNN 180
                                      G++QF  ++    QG G  N N+        NN
Sbjct: 238 LNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSND------AKNN 297

Query: 181 NRGRGRGR-NNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSS 202
            RGRGRGR +  RG   KP+CQLCGKYGH+A  CY RF+E FNN  S+NNN         
Sbjct: 298 VRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNN--------R 357

[Close]

BLAST of Lag0028805 vs. ExPASy TrEMBL
Match: A0A803PHM7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.8e-27
Identity = 83/216 (38.43%), Postives = 118/216 (54.63%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MT ++AT+V+   TS ++W +LE ++GA  K+R++  R  +Q  + GSM M  +L   KQ
Sbjct: 63  MTESIATEVMGSLTSADLWSSLEALFGAHLKSRMDEYRNKIQTVRKGSMNMTAHLKQKKQ 122

Query: 61  ASENLQLATGQYSGHKQFSPNRGSNSQ-------------GNGPSNFNNNSGFRGGNNNN 120
            ++ L LA   Y      S    +  Q             GNG +    N+  RGG NNN
Sbjct: 123 WADVLALAGDPYPEPLLISNKHQALKQCLSYCNFANKGAFGNGGNFGQGNNRGRGGTNNN 182

Query: 121 RGRGR--GRNNQRGGGPKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSS 180
             RGR  GR     GGPKPTCQ+CG+YGH A YCY+R+ E F       N    N    +
Sbjct: 183 GNRGRFGGRGRGGRGGPKPTCQVCGRYGHSAAYCYNRYAESFMGTTPLGNTNDSNKPGQN 242

Query: 181 SAAYITSPEILNDPKWLADNGATNHVTADLGNIATK 202
           +AA++ +PE+L D  W AD+GA+NHVT++  N+  K
Sbjct: 243 AAAFVATPEMLQDDAWYADSGASNHVTSEAANLNQK 278

[Close]

BLAST of Lag0028805 vs. ExPASy TrEMBL
Match: A0A803QD97 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.1e-25
Identity = 88/260 (33.85%), Postives = 129/260 (49.62%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           MT  +AT+++   +S E+W +LE ++GA +KA+++  R  +Q  + GSM M++YL   KQ
Sbjct: 244 MTEGIATEIMGCSSSAELWSSLEALFGAHSKAKMDEYRTKIQTVRKGSMSMVDYLKQKKQ 303

Query: 61  ASENLQLATGQY----------SG------------------------------------ 120
            S+ L LA   Y          SG                                    
Sbjct: 304 WSDVLTLAGDPYPESLLVSNVLSGLDIEYLPIVLQIEAREKTTWQMLQDLLLSFDSKLDR 363

Query: 121 HKQFSPNRGSNSQGNGPSNFNNNSG---FRGGNNNNRGRG------RGRNNQRG----GG 180
               S N   ++  +  +N  N SG   +  GNNNN+GRG      RGR N RG    GG
Sbjct: 364 LSSLSENSKHSNNASPTANLANKSGSGNYNPGNNNNKGRGGSSSNSRGRFNGRGRSGRGG 423

Query: 181 PKPTCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAYITSPEILNDPKW 202
           PKPTCQ+CG+YGH A YCY+RF+E F       N    N +  ++ A++ +PE+L D  W
Sbjct: 424 PKPTCQVCGRYGHSAAYCYNRFDETFMGTTPPGNTGDNNKSGQNATAFVATPEMLQDDAW 483

[Close]

BLAST of Lag0028805 vs. ExPASy TrEMBL
Match: A0A6J1CLV9 (uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012809 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22
Identity = 93/254 (36.61%), Postives = 121/254 (47.64%), Query Frame = 0


Query: 1   MTPAVATDVVNFRTSREVWKALEEVYGATNKARVNHLRGILQNTKNGSMKMIEYLAIMKQ 60
           M+P +A DV++  TSR+VWKALE++Y   NKAR+N L+  LQ T+   +KM +YL+ MKQ
Sbjct: 1   MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60

Query: 61  ASENLQLA--------------TGQYSGHKQ---------------------------FS 120
            ++ L LA              TG  + + Q                             
Sbjct: 61  LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120

Query: 121 PNRGSNSQGNGPS-NFNNNSGF------------RGGNNNNRGRGRGR--NNQRGGGPKP 180
            N  S +  +GPS N+  N               RG   N+RGR RG     QR    +P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180

Query: 181 TCQLCGKYGHLAPYCYSRFEEEFNNPYSANNNTQGNSARSSSAAYITSPEILNDPKWLAD 199
           TCQ+CGK GHLA  CY R     N  Y  N    GN A +   AYIT PE++ DP WL D
Sbjct: 181 TCQVCGKIGHLAVVCYHR----LNMQYMGNTPQGGNQAPN---AYITGPEVIIDPNWLID 240

The following BLAST results are available for this feature:

BLAST of Lag0028805 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157748.1	1.8e-38	40.94	uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]	[more]
XP_022157750.1	1.8e-38	40.94	uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]	[more]
XP_022142770.1	4.0e-22	36.61	uncharacterized protein LOC111012809 [Momordica charantia]	[more]
XP_030492910.1	2.7e-18	30.11	uncharacterized protein LOC115709020 isoform X2 [Cannabis sativa]	[more]
TXG55646.1	2.9e-17	30.88	hypothetical protein EZV62_020902 [Acer yangbiense]	[more]

BLAST of Lag0028805 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0028805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU77	8.6e-39	40.94	uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DTZ7	8.6e-39	40.94	uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A803PHM7	5.8e-27	38.43	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QD97	4.1e-25	33.85	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1CLV9	1.9e-22	36.61	uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Lag0028805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..126
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 3..75
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 86..198
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 86..198 coord: 3..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0028805.1	Lag0028805.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane