Lag0028695 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGTAAGATTAACACATCATCTAGCTATAGAGGTTAATGCTAGAGAGGAGGCTTCAGTTTCGGAGAAGACTAAATCTAGGTCCTTCTTGAGGAAAATTTGGAGTCTTAAAATCATCCCAAGAGTTAAGAAATGCGTGTGGAAAATCCTAAAGAATCTGATCCCTACAAAAATAAACCTACTTTCTATAGGAATTGACACTGACCACTTGTGTTTAATGTGCAGGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGTAAGTTTTCAAAAAAGATTTGGCAAAATTTCCTTCCTAATTACGTGCATAACTTGGATTCTTGCAGGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG MKGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAVDIWDRMVENMSEQETNKIALILWSIWSYRNKIYFNIMKANLEQLIRSIQATIEEHFRIQEIYLKDSQSESHRS Homology
BLAST of Lag0028695 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 165.2 bits (417), Expect = 7.3e-37 Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 0
BLAST of Lag0028695 vs. NCBI nr
Match: XP_030502375.1 (uncharacterized protein LOC115717530 [Cannabis sativa]) HSP 1 Score: 152.1 bits (383), Expect = 6.4e-33 Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 0
BLAST of Lag0028695 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis]) HSP 1 Score: 147.5 bits (371), Expect = 1.6e-31 Identity = 67/180 (37.22%), Postives = 113/180 (62.78%), Query Frame = 0
BLAST of Lag0028695 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina]) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31 Identity = 72/209 (34.45%), Postives = 121/209 (57.89%), Query Frame = 0
BLAST of Lag0028695 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina]) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-31 Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16 Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 8.5e-04 Identity = 26/87 (29.89%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 3.6e-37 Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803P5U5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34 Identity = 80/218 (36.70%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33 Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 0
BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803QH07 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 0
BLAST of Lag0028695 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17 Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Lag0028695 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16 Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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