Lag0028695 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028695
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H-like superfamily protein
Locationchr8: 28584064 .. 28585134 (-)
RNA-Seq ExpressionLag0028695
SyntenyLag0028695
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGTAAGATTAACACATCATCTAGCTATAGAGGTTAATGCTAGAGAGGAGGCTTCAGTTTCGGAGAAGACTAAATCTAGGTCCTTCTTGAGGAAAATTTGGAGTCTTAAAATCATCCCAAGAGTTAAGAAATGCGTGTGGAAAATCCTAAAGAATCTGATCCCTACAAAAATAAACCTACTTTCTATAGGAATTGACACTGACCACTTGTGTTTAATGTGCAGGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGTAAGTTTTCAAAAAAGATTTGGCAAAATTTCCTTCCTAATTACGTGCATAACTTGGATTCTTGCAGGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG

mRNA sequence

ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG

Coding sequence (CDS)

ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCTAGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTTTCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGATTTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCCTTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATTGGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTATTTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAGCCACCGGAGTTAG

Protein sequence

MKGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAVDIWDRMVENMSEQETNKIALILWSIWSYRNKIYFNIMKANLEQLIRSIQATIEEHFRIQEIYLKDSQSESHRS
Homology
BLAST of Lag0028695 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 165.2 bits (417), Expect = 7.3e-37
Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 4   QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLT 63
           +D GGMGFR+ +IFNQAMLAKQSWRILR+P+SLLA+ LR +Y+K G +++A +G  PS  
Sbjct: 513 KDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYA 572

Query: 64  WKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYL 123
           W++I+WGR+LF KGYRWKVG    I +  DP + R G+  P+     ++   V  +M   
Sbjct: 573 WRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGR 632

Query: 124 RKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT 169
            +W+E+ +RE+F+  + + I++ PL +    DEIIW  +K G F+
Sbjct: 633 GRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGIFS 677

BLAST of Lag0028695 vs. NCBI nr
Match: XP_030502375.1 (uncharacterized protein LOC115717530 [Cannabis sativa])

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-33
Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 2   KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPS 61
           K +  GGMGFR    FNQA+LAKQ+WRI  NP+SLL+R+L+ RY+ +  +++AS+GH+PS
Sbjct: 270 KSKSEGGMGFRSFIHFNQALLAKQAWRIYDNPDSLLSRVLKSRYFPNNTFLEASLGHSPS 329

Query: 62  LTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMT 121
           LTW+ I W R L  KG RWKVG   HI  D DP I    +  P        G +V ++++
Sbjct: 330 LTWQGIHWARELLLKGLRWKVGDGRHIQSDYDPWIPGHNTFLPFLYKGPSNG-VVANLIS 389

Query: 122 YLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT 169
             R+WN  I+ + F P DV+ I+ IPL     +D +IW ++  G +T
Sbjct: 390 DERQWNVPILHQFFSPADVDRILTIPLSYFSGRDTLIWHHHSTGLYT 435

BLAST of Lag0028695 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-31
Identity = 67/180 (37.22%), Postives = 113/180 (62.78%), Query Frame = 0

Query: 7    GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKN 66
            GG+GFRE + FNQA++AKQ+WR+L+ PNSL++R+L+ RY+++  ++ A  G N S  W++
Sbjct: 886  GGLGFREFSCFNQALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFLCAKAGANASYIWRS 945

Query: 67   IVWGRNLFTKGYRWKVGTKSHIYIDQD---PRINRQGSRYPIEVPEDLKGRIVRSIMTYL 126
            I+WGR +  KG RW++G    I I  D   PR       +P+ +P      +V  ++   
Sbjct: 946  IMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLP---VSSVVADLIKAD 1005

Query: 127  RKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPN 184
             +W+E+ +R+ FL  D  +I+KIPL  + ++DE++W Y+K+GN++ K    L+     P+
Sbjct: 1006 NQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALRSKFPD 1062

BLAST of Lag0028695 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31
Identity = 72/209 (34.45%), Postives = 121/209 (57.89%), Query Frame = 0

Query: 7   GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKN 66
           GGMGFR+ + FNQA++AKQ WRI++ P+SL+AR+L+ RY+K   ++ A +G  PS  W++
Sbjct: 650 GGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGLGSKPSFVWRS 709

Query: 67  IVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYLRKW 126
           IVWGR +  KG RW++G   ++ +  +  I R  +  PI  P       V  ++   ++W
Sbjct: 710 IVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQW 769

Query: 127 NEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEA 186
            E +I + F P D E I++IPL     +D++IW Y+KKG ++ K    ++  +  P   +
Sbjct: 770 REDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPEDPS 829

Query: 187 V-----DIWDRMVENMSEQETNKIALILW 211
                 ++W R +  ++  E  K+ + LW
Sbjct: 830 CSNHDQNLW-RFIWKLAIPE--KVKIFLW 855

BLAST of Lag0028695 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-31
Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 0

Query: 7   GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKN 66
           GG+GFR+ + FNQA+LAKQ WR+L+NP SL+A++++ RYYK+ D++ A VG +PS  W++
Sbjct: 579 GGLGFRDVSCFNQALLAKQGWRLLQNPESLVAKVIKARYYKNTDFLNAKVGSSPSFIWRS 638

Query: 67  IVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYLRKW 126
           I+WGR +  KG RW++G    I I     I R  +   I  P    G  V  ++   ++W
Sbjct: 639 ILWGRQVLQKGTRWRIGNGEKIQIQASNWIPRPTTFKLIVEPSLPTGAKVSELILPNQQW 698

Query: 127 NEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMP 183
           NE +I ++F   D + I  I L     +DEIIW Y++KG ++ K    L+  +  P
Sbjct: 699 NESMINQSFARMDADIIKSILLPRTPQEDEIIWHYDRKGLYSVKSGYQLALKIKFP 754

BLAST of Lag0028695 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 4   QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLT 63
           +D GG+GFR+   FNQA+LAKQS+RI+  P++LL+R+LR RY+     ++ SVG  PS  
Sbjct: 52  EDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYA 111

Query: 64  WKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ 93
           W++I+ GR L ++G    +G   H  +++D+
Sbjct: 112 WRSIIHGRELLSRGLLRTIGDGIHTKVWLDR 142

BLAST of Lag0028695 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.5e-04
Identity = 26/87 (29.89%), Postives = 47/87 (54.02%), Query Frame = 0

Query: 7   GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYY----KDGDYIKASVGHNPSL 66
           GG+G R     N+A+++K  WR+L+  NSL   +L+++Y+    +D  ++      + S 
Sbjct: 99  GGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPK--GSWSS 158

Query: 67  TWKNIVWG-RNLFTKGYRWKVGTKSHI 89
           TW++I  G R++ + G  W  G    I
Sbjct: 159 TWRSIAIGLRDVVSHGVGWIPGDGQQI 183

BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.6e-37
Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 4   QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLT 63
           +D GGMGFR+ +IFNQAMLAKQSWRILR+P+SLLA+ LR +Y+K G +++A +G  PS  
Sbjct: 513 KDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYA 572

Query: 64  WKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMTYL 123
           W++I+WGR+LF KGYRWKVG    I +  DP + R G+  P+     ++   V  +M   
Sbjct: 573 WRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGR 632

Query: 124 RKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT 169
            +W+E+ +RE+F+  + + I++ PL +    DEIIW  +K G F+
Sbjct: 633 GRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGIFS 677

BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803P5U5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 80/218 (36.70%), Postives = 127/218 (58.26%), Query Frame = 0

Query: 2   KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPS 61
           K +  GGMGFR    FNQA+LAKQ+WR++ NPNSLL ++L+ +Y+    +++ASVGH+PS
Sbjct: 240 KTKGEGGMGFRSFIHFNQALLAKQAWRLVENPNSLLRKLLKSKYFPHNSFLQASVGHSPS 299

Query: 62  LTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMT 121
           LTW+ I WGR L  +G RWK+     I    DP I+   +  PI+      G +V +++T
Sbjct: 300 LTWQGIRWGRELLIQGLRWKISEGRSIRSGFDPWIHGHTTFTPIQYSGPRNG-VVANLIT 359

Query: 122 YLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAM 181
             ++WN  ++++ F P DVE I+ +PL    ++D++IW ++  G F        S   +M
Sbjct: 360 DEKQWNLSLLQQYFSPLDVEKILTMPLSYFPTRDKLIWHHHSFGKF--------SVDASM 419

Query: 182 PNWEAVDIWDRMVENMSEQETNKIALILWSIWSYRNKI 220
            N    D    +    ++ E  ++   LW+IW+ RNK+
Sbjct: 420 KNG---DYLQHLSSIYNKAEMEQLFCTLWAIWTERNKV 445

BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33
Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 2    KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPS 61
            K +  GGMGFR    FNQA+LAKQ+WRI  NP+SLL+R+L+ RY+ +  +++AS+GH+PS
Sbjct: 1291 KSKSEGGMGFRSFIHFNQALLAKQAWRIYDNPDSLLSRVLKSRYFPNNTFLEASLGHSPS 1350

Query: 62   LTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMT 121
            LTW+ I W R L  KG RWKVG   HI  D DP I    +  P        G +V ++++
Sbjct: 1351 LTWQGIHWARELLLKGLRWKVGDGRHIQSDYDPWIPGHNTFLPFLYKGPSNG-VVANLIS 1410

Query: 122  YLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT 169
              R+WN  I+ + F P DV+ I+ IPL     +D +IW ++  G +T
Sbjct: 1411 DERQWNVPILHQFFSPADVDRILTIPLSYFSGRDTLIWHHHSTGLYT 1456

BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 0

Query: 2    KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPS 61
            K +  GGMGFR    FNQA+LAKQ+WRI+  PNSLL+ +L+ +Y+    +++AS+GH+PS
Sbjct: 1356 KTKGEGGMGFRSFIQFNQALLAKQAWRIVEYPNSLLSTLLKSKYFPHNSFLEASMGHSPS 1415

Query: 62   LTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPEDLKGRIVRSIMT 121
            LTW+ I WGR L   G RWK+G    +    DP +    S  PI       G +V +++T
Sbjct: 1416 LTWQGIRWGRELLAHGLRWKIGEGRTVRSGFDPWLPGHSSFLPITYSGPPNG-VVANLIT 1475

Query: 122  YLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCY--- 181
              R+WN  ++++ F P D+E I+ +PL    ++D++IW ++  GNFT +   +L+     
Sbjct: 1476 DERQWNIPLLQQYFCPLDIEKILTLPLSFFPTRDKLIWHHHSSGNFTVQSAYHLATSLEN 1535

Query: 182  --VAMPNWEAVDIWDRMVENMSEQETNKIALILWSI 213
              ++  +  AV  W       S Q   K+ +  W +
Sbjct: 1536 EDLSSSSTSAVQWWKHF---WSLQIPQKVKIFAWRV 1567

BLAST of Lag0028695 vs. ExPASy TrEMBL
Match: A0A803QH07 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 2    KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPS 61
            K +  GGMGFR    FNQA+LAKQ+WRI   P+SLL+R+L+ RY+    ++ AS+GH+PS
Sbjct: 1318 KSKHEGGMGFRSFVHFNQALLAKQAWRIFDMPDSLLSRLLKHRYFSTTSFLDASIGHSPS 1377

Query: 62   LTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEV--PEDLKGRIVRSI 121
             TW++I WGR L  KG R+KVG  SHI   +DP I    S  P+    P  L    V ++
Sbjct: 1378 YTWQSICWGRELLIKGLRFKVGNGSHIDCSKDPWIPSHDSFRPVSYCGPPQLP---VSAL 1437

Query: 122  MTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYV 180
            +   R+WN  ++ + F P DVE I+ IPL    ++D +IW ++  G++  K   +L+ ++
Sbjct: 1438 INDNREWNSTLLNDFFQPIDVEKILSIPLSYFATQDRLIWHHSTSGSYNVKSGFHLATHL 1494

BLAST of Lag0028695 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 4   QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLT 63
           +D GG+GFR+   FNQA+LAKQS+RI+  P++LL+R+LR RY+     ++ SVG  PS  
Sbjct: 52  EDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYA 111

Query: 64  WKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ 93
           W++I+ GR L ++G    +G   H  +++D+
Sbjct: 112 WRSIIHGRELLSRGLLRTIGDGIHTKVWLDR 142

BLAST of Lag0028695 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 0

Query: 7   GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKN 66
           GG+GF++   FN A+L KQ WR+L  P SL+A++ + RY+   D + A +G  PS  WK+
Sbjct: 54  GGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKS 113

Query: 67  IVWGRNLFTKGYRWKVGTKS------HIYIDQDP-----RINRQGSRYPIEVPEDLKGRI 126
           I   + +  +G R  VG         H ++D  P     R+ R   +    V   LK  +
Sbjct: 114 IHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILK--V 173

Query: 127 VRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGK 171
              I    R+W + +I   F   + + I ++  G     D   W Y   G++T K
Sbjct: 174 SDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVK 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155286.17.3e-3746.06uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_030502375.16.4e-3343.71uncharacterized protein LOC115717530 [Cannabis sativa][more]
XP_024950112.11.6e-3137.22uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_024037590.12.1e-3134.45uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024035599.12.7e-3139.20uncharacterized protein LOC112096407 [Citrus clementina][more]
Match NameE-valueIdentityDescription
P932952.5e-1642.86Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F68.5e-0429.89Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1DRA03.6e-3746.06uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A803P5U51.6e-3436.70Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PQ303.1e-3343.71Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QEG91.5e-3235.65Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QH071.5e-3241.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00310.11.8e-1742.86RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.13.4e-1629.71Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 6..170
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 6..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028695.1Lag0028695.1mRNA