Lag0028688 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028688
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr8: 28480109 .. 28481391 (+)
RNA-Seq ExpressionLag0028688
SyntenyLag0028688
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATTTGGCTGTGCTCTGGGAGCGTATGGTGTTGACTGAGGAAGAAACGATGGTTGTTGTCGTGGAGGAGGGTTTGTCGTTGCTGTCGGAGGCCACAGTCCAGGTATGTGCTGTTGGTAAGTTGCTTTCTTCTCGGAAAACGAATGTTGAGGCTTTTCGGAAAGTGCTCATTTCAGTTTGGAATGTCCATAGTTCTACTCGAATTGAGGCGCTGGGTGATAATTTCTTTGTTATTCGGTTTTGTTCTTTGTCTGAGAAGCGCCAGATTATGAATGGGGGCCCTTGGTCTTTTGATAAATCATTGTTGGCTCTTGTCTCTCCTCGTGGAATTGATGATCCTTTGCTGTTGGATTTTACTTATAACGCATTTTGGGTCCAGATTTTAAATGTTTCGTTCCACTGCTTGACTTCGACCATGGCTCGTCGGCTGGGCTCTCTGGTGGGTATGGTTGAAGAGGTTCATGGTGAGGGACATGGAGAATGGCTGGGTTCGGTTATGCATGTTCGTGTTCTAATTGATTTGTCAAAACCTCTCCGTCGTGGGGTGAGGTTGAAGATTAGTGAGAATAAGTACCAATGGTGCCCTGTTGGGTATGAAAAACTGCCTGATTTTTGTTACCAATGTGGTCGGATTGGGCATTTGCATCGTGATTGTGAACTTGTTTTGTCTGAGTTGGGTGCTGCTTCTCCTTTGCAATATGGGGAATGGATGAGGGCTATATCAATGAGACAGATTTCTGGTCTATATGGAACTTCTGATGATTTATCTAGAAGCAGAGGGATGCGAGGACGTCGTGGCTCTGGTGATGGATCTTGGCGAGGCAGGGGTAGAGGGCCTTTTGTGGGCCGCCCCCTAGTTCTCCTTCAACTTCAGATGATGATTCACCTCCTGAGCATCTGGATATCCCACATTCTGCACAAAGAGAGGAAAGTATACCACTGCTGCCTGAGGTGGGTAAATGTTTCAAGGGTAAAACGGTTGTGGAACCACAACAGATGGGTGTGTCTATTACGGATAGTCTGGCGGGTGTGGGTTCTAACTTATCTCCGGTGTCTATTGCTGCTAGGAAGAACTGGAAGCGGCTGGCTCGTGGTGCACTTATGGATGTTACGAACTCTGTTTTGGATACAGGGTCTTCTTTTGGTAAAAGATCGGGCTCAGAGAATCTGGAGGGTGAGAATGTTACTATGAGTAAGAAGAAGGTTAAGGTTGGGTCTAATGTATATACTGCACAGAATGAGGCGGAGGCTGGCTGCCAGCCCCGCCGGGTGCCATGA

mRNA sequence

ATGGACGATTTGGCTGTGCTCTGGGAGCGTATGGTGTTGACTGAGGAAGAAACGATGGTTGTTGTCGTGGAGGAGGGTTTGTCGTTGCTGTCGGAGGCCACAGTCCAGGTATGTGCTGTTGGTAAGTTGCTTTCTTCTCGGAAAACGAATGTTGAGGCTTTTCGGAAAGTGCTCATTTCAGTTTGGAATGTCCATAGTTCTACTCGAATTGAGGCGCTGGGTGATAATTTCTTTGTTATTCGGTTTTGTTCTTTGTCTGAGAAGCGCCAGATTATGAATGGGGGCCCTTGGTCTTTTGATAAATCATTGTTGGCTCTTGTCTCTCCTCGTGGAATTGATGATCCTTTGCTGTTGGATTTTACTTATAACGCATTTTGGGTCCAGATTTTAAATGTTTCGTTCCACTGCTTGACTTCGACCATGGCTCGTCGGCTGGGCTCTCTGGTGGGTATGGTTGAAGAGGTTCATGGTGAGGGACATGGAGAATGGCTGGGTTCGGTTATGCATGTTCGTGTTCTAATTGATTTGTCAAAACCTCTCCGTCGTGGGGTGAGGTTGAAGATTAGTGAGAATAAGTACCAATGGTGCCCTGTTGGGTATGAAAAACTGCCTGATTTTTGTTACCAATGTGGTCGGATTGGGCATTTGCATCGTGATTGTGAACTTGTTTTGTCTGAGTTGGGTGCTGCTTCTCCTTTGCAATATGGGGAATGGATGAGGGCTATATCAATGAGACAGATTTCTGGTCTATATGGAACTTCTGATGATTTATCTAGAAGCAGAGGGATGCGAGGACGTCGTGGCTCTGATGATGATTCACCTCCTGAGCATCTGGATATCCCACATTCTGCACAAAGAGAGGAAAGTATACCACTGCTGCCTGAGGTGGGTAAATGTTTCAAGGGTAAAACGGTTGTGGAACCACAACAGATGGGTGTGTCTATTACGGATAGTCTGGCGGGTGTGGGTTCTAACTTATCTCCGGTGTCTATTGCTGCTAGGAAGAACTGGAAGCGGCTGGCTCGTGGTGCACTTATGGATGTTACGAACTCTGTTTTGGATACAGGGTCTTCTTTTGGTAAAAGATCGGGCTCAGAGAATCTGGAGGGTGAGAATGTTACTATGAGTAAGAAGAAGGTTAAGGTTGGGTCTAATGTATATACTGCACAGAATGAGGCGGAGGCTGGCTGCCAGCCCCGCCGGGTGCCATGA

Coding sequence (CDS)

ATGGACGATTTGGCTGTGCTCTGGGAGCGTATGGTGTTGACTGAGGAAGAAACGATGGTTGTTGTCGTGGAGGAGGGTTTGTCGTTGCTGTCGGAGGCCACAGTCCAGGTATGTGCTGTTGGTAAGTTGCTTTCTTCTCGGAAAACGAATGTTGAGGCTTTTCGGAAAGTGCTCATTTCAGTTTGGAATGTCCATAGTTCTACTCGAATTGAGGCGCTGGGTGATAATTTCTTTGTTATTCGGTTTTGTTCTTTGTCTGAGAAGCGCCAGATTATGAATGGGGGCCCTTGGTCTTTTGATAAATCATTGTTGGCTCTTGTCTCTCCTCGTGGAATTGATGATCCTTTGCTGTTGGATTTTACTTATAACGCATTTTGGGTCCAGATTTTAAATGTTTCGTTCCACTGCTTGACTTCGACCATGGCTCGTCGGCTGGGCTCTCTGGTGGGTATGGTTGAAGAGGTTCATGGTGAGGGACATGGAGAATGGCTGGGTTCGGTTATGCATGTTCGTGTTCTAATTGATTTGTCAAAACCTCTCCGTCGTGGGGTGAGGTTGAAGATTAGTGAGAATAAGTACCAATGGTGCCCTGTTGGGTATGAAAAACTGCCTGATTTTTGTTACCAATGTGGTCGGATTGGGCATTTGCATCGTGATTGTGAACTTGTTTTGTCTGAGTTGGGTGCTGCTTCTCCTTTGCAATATGGGGAATGGATGAGGGCTATATCAATGAGACAGATTTCTGGTCTATATGGAACTTCTGATGATTTATCTAGAAGCAGAGGGATGCGAGGACGTCGTGGCTCTGATGATGATTCACCTCCTGAGCATCTGGATATCCCACATTCTGCACAAAGAGAGGAAAGTATACCACTGCTGCCTGAGGTGGGTAAATGTTTCAAGGGTAAAACGGTTGTGGAACCACAACAGATGGGTGTGTCTATTACGGATAGTCTGGCGGGTGTGGGTTCTAACTTATCTCCGGTGTCTATTGCTGCTAGGAAGAACTGGAAGCGGCTGGCTCGTGGTGCACTTATGGATGTTACGAACTCTGTTTTGGATACAGGGTCTTCTTTTGGTAAAAGATCGGGCTCAGAGAATCTGGAGGGTGAGAATGTTACTATGAGTAAGAAGAAGGTTAAGGTTGGGTCTAATGTATATACTGCACAGAATGAGGCGGAGGCTGGCTGCCAGCCCCGCCGGGTGCCATGA

Protein sequence

MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLISVWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDFTYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPLRRGVRLKISENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMRAISMRQISGLYGTSDDLSRSRGMRGRRGSDDDSPPEHLDIPHSAQREESIPLLPEVGKCFKGKTVVEPQQMGVSITDSLAGVGSNLSPVSIAARKNWKRLARGALMDVTNSVLDTGSSFGKRSGSENLEGENVTMSKKKVKVGSNVYTAQNEAEAGCQPRRVP
Homology
BLAST of Lag0028688 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-65
Identity = 132/308 (42.86%), Postives = 192/308 (62.34%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MD++  LWE    T +E   V ++ G  +L+   V++C V KL +S++ + EA R V+ S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           VW VH+STR E LG N +VI F SLSEK ++++ GPW+F+KSLL L SP   + PL ++F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
            + AFW+QI N+ F C+++ MA  LG+ +G VEE+ G+G   W G  + VRV ID+SKPL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGVRLKISENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMR 240
           RRG++LK S+ K  WCP+ YEKLPDFCY+CG+IGH  R+CE     +   SP QYG+W+R
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

Query: 241 AISMRQI-----------SGLYGTSDDLSRSRGMRGRRGSDDDSPPEHLDIPHSAQR--- 295
           A  +++             G +G    ++  RG RG     D++  + +D P S+ R   
Sbjct: 241 ATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDENWRD-IDGPESSHRRAV 300

BLAST of Lag0028688 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-52
Identity = 103/221 (46.61%), Postives = 147/221 (66.52%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MDD+  LWE   L +EE   +V++    +L+   +Q+CAVGKL  S++  VEAF  V+  
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           VW +H+STRIE  G N +VI F +++EK ++ + GPW+FDKSLL LV     + PL +D 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
           +  AFWVQI  ++F C+T  MA+ LG+ +G VEEV G    +W+   + VRV I++ KPL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGVRLKISENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCE 222
           RRG+++K S+ K  WCP+ YE+LPDFCY CG +GH  R+ E
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

BLAST of Lag0028688 vs. NCBI nr
Match: XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 7.4e-44
Identity = 87/201 (43.28%), Postives = 129/201 (64.18%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MD++  LWE   LT+E+   ++++    L++   VQ  AVGKL +S++ +VEAFR V+ S
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           +W VH ST IE  G N +VI F S++EK +++  GPWSF+ SLL L SP   D P  ++F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
            + A W+QI  + F C+   MA+ LG+ +G VEE+   G  EW G  + VRV ID+SKP 
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180

Query: 181 RRGVRLKISENKYQWCPVGYE 202
           +RG++++  + K  WCP+ YE
Sbjct: 181 KRGLKVRTGDEKESWCPLRYE 201

BLAST of Lag0028688 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 188.7 bits (478), Expect = 9.6e-44
Identity = 122/430 (28.37%), Postives = 203/430 (47.21%), Query Frame = 0

Query: 2   DDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLISV 61
           DD++   E++ L ++   +  ++  L    E ++ +  +GK ++++  N EAF+  + ++
Sbjct: 4   DDISRKCEKLSLDDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTI 63

Query: 62  WNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDFT 121
           W   +   +E +G N F  RF +  ++++I+ GGPW FDK LL L    G +    L F 
Sbjct: 64  WQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFR 123

Query: 122 YNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPLR 181
           Y  FW+Q+ N+   CL   +   LG LVG V+E+     GE +G  + +RVLID+  PL+
Sbjct: 124 YVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLK 183

Query: 182 RGVRLKISEN-KYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMR 241
           RG+R+ + ++ K     + YE+LP+FCY CG+IGHL RDC L   E+ ++S  ++G WMR
Sbjct: 184 RGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMR 243

Query: 242 AISMRQISGL------------YGTSDDLSRSR---GMRGRRGSDDD------------- 301
           A+S  +  G              G+SD L   R     +   G D               
Sbjct: 244 AVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRDGEQLDLMT 303

Query: 302 --------------------SPPEHLDIPHSAQREESIPLLPEVGKCFKGKTVVEPQQMG 361
                               S  E L +  S  +E+      +  K  +    V    +G
Sbjct: 304 ELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTVTNPVIG 363

Query: 362 VSITDSLAGVGSNLSPVSIAARKNWKRLARGALMDVTNSVLDTGSSFGKRSGSENLEGEN 383
            ++++    +GS  +   I  +K WKRLAR    +   SV +   S GK+ G  ++E  +
Sbjct: 364 ENVSNQEGTMGSEDNGGKITNQKRWKRLAR----EKCGSVNEGNQSLGKKDGDMDIEEYS 423

BLAST of Lag0028688 vs. NCBI nr
Match: XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-42
Identity = 96/281 (34.16%), Postives = 151/281 (53.74%), Query Frame = 0

Query: 9   ERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLISVWNVHSST 68
           E + L  EE  ++     + +  E  V  C VGK+L +R    E  R  +   W     T
Sbjct: 27  EAITLQSEEDNIISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQAWRTTKET 86

Query: 69  RIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDFTYNAFWVQ 128
           ++E+LGDN F+ +F S SEK++I+ GGPW FD+SL+ +  P GI D    DFT+  FWVQ
Sbjct: 87  KVESLGDNIFLFKFASESEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFTHALFWVQ 146

Query: 129 ILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPLRRGVRLKI 188
           I N+   C+   + + +G  +G V+EV  +  GE +GS + VR+++++++PL + + LK+
Sbjct: 147 IHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVTRPLPKRLLLKL 206

Query: 189 SENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELG-AASPLQYGEWMRAISMRQI 248
            +       + YEKLPDFC+ CG IGH +R+C   L   G +   L YG WMRA +  + 
Sbjct: 207 EDRGQISLRIAYEKLPDFCFCCGLIGHQYREC---LDYKGQSKDDLTYGAWMRAQTRAE- 266

Query: 249 SGLYGTSDDLSRSRGMRGRRGSDDDSPPEHLDIPHSAQREE 289
                      R+R  R +   + D  P +  +    Q+E+
Sbjct: 267 -----------RARHARDKDRGNGDKEPSNTALGSQEQQEQ 292

BLAST of Lag0028688 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.6e-66
Identity = 132/308 (42.86%), Postives = 192/308 (62.34%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MD++  LWE    T +E   V ++ G  +L+   V++C V KL +S++ + EA R V+ S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           VW VH+STR E LG N +VI F SLSEK ++++ GPW+F+KSLL L SP   + PL ++F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
            + AFW+QI N+ F C+++ MA  LG+ +G VEE+ G+G   W G  + VRV ID+SKPL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGVRLKISENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMR 240
           RRG++LK S+ K  WCP+ YEKLPDFCY+CG+IGH  R+CE     +   SP QYG+W+R
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

Query: 241 AISMRQI-----------SGLYGTSDDLSRSRGMRGRRGSDDDSPPEHLDIPHSAQR--- 295
           A  +++             G +G    ++  RG RG     D++  + +D P S+ R   
Sbjct: 241 ATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDENWRD-IDGPESSHRRAV 300

BLAST of Lag0028688 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 103/221 (46.61%), Postives = 147/221 (66.52%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MDD+  LWE   L +EE   +V++    +L+   +Q+CAVGKL  S++  VEAF  V+  
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           VW +H+STRIE  G N +VI F +++EK ++ + GPW+FDKSLL LV     + PL +D 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
           +  AFWVQI  ++F C+T  MA+ LG+ +G VEEV G    +W+   + VRV I++ KPL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGVRLKISENKYQWCPVGYEKLPDFCYQCGRIGHLHRDCE 222
           RRG+++K S+ K  WCP+ YE+LPDFCY CG +GH  R+ E
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

BLAST of Lag0028688 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-44
Identity = 87/201 (43.28%), Postives = 129/201 (64.18%), Query Frame = 0

Query: 1   MDDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLIS 60
           MD++  LWE   LT+E+   ++++    L++   VQ  AVGKL +S++ +VEAFR V+ S
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 61  VWNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDF 120
           +W VH ST IE  G N +VI F S++EK +++  GPWSF+ SLL L SP   D P  ++F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 121 TYNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPL 180
            + A W+QI  + F C+   MA+ LG+ +G VEE+   G  EW G  + VRV ID+SKP 
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180

Query: 181 RRGVRLKISENKYQWCPVGYE 202
           +RG++++  + K  WCP+ YE
Sbjct: 181 KRGLKVRTGDEKESWCPLRYE 201

BLAST of Lag0028688 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.6e-44
Identity = 122/430 (28.37%), Postives = 203/430 (47.21%), Query Frame = 0

Query: 2   DDLAVLWERMVLTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLISV 61
           DD++   E++ L ++   +  ++  L    E ++ +  +GK ++++  N EAF+  + ++
Sbjct: 4   DDISRKCEKLSLDDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTI 63

Query: 62  WNVHSSTRIEALGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDFT 121
           W   +   +E +G N F  RF +  ++++I+ GGPW FDK LL L    G +    L F 
Sbjct: 64  WQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFR 123

Query: 122 YNAFWVQILNVSFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPLR 181
           Y  FW+Q+ N+   CL   +   LG LVG V+E+     GE +G  + +RVLID+  PL+
Sbjct: 124 YVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLK 183

Query: 182 RGVRLKISEN-KYQWCPVGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMR 241
           RG+R+ + ++ K     + YE+LP+FCY CG+IGHL RDC L   E+ ++S  ++G WMR
Sbjct: 184 RGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMR 243

Query: 242 AISMRQISGL------------YGTSDDLSRSR---GMRGRRGSDDD------------- 301
           A+S  +  G              G+SD L   R     +   G D               
Sbjct: 244 AVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRDGEQLDLMT 303

Query: 302 --------------------SPPEHLDIPHSAQREESIPLLPEVGKCFKGKTVVEPQQMG 361
                               S  E L +  S  +E+      +  K  +    V    +G
Sbjct: 304 ELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTVTNPVIG 363

Query: 362 VSITDSLAGVGSNLSPVSIAARKNWKRLARGALMDVTNSVLDTGSSFGKRSGSENLEGEN 383
            ++++    +GS  +   I  +K WKRLAR    +   SV +   S GK+ G  ++E  +
Sbjct: 364 ENVSNQEGTMGSEDNGGKITNQKRWKRLAR----EKCGSVNEGNQSLGKKDGDMDIEEYS 423

BLAST of Lag0028688 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.4e-42
Identity = 89/231 (38.53%), Postives = 137/231 (59.31%), Query Frame = 0

Query: 13  LTEEETMVVVVEEGLSLLSEATVQVCAVGKLLSSRKTNVEAFRKVLISVWNVHSSTRIEA 72
           L++EE   V  +  + +  E  +  C VGK+L +R+ ++E  +  +  VW      +IE 
Sbjct: 15  LSDEEGGRVSFKNRMKINGEKILAGCLVGKVLHTREVSIEGLKMAMQRVWRTSREVKIEK 74

Query: 73  LGDNFFVIRFCSLSEKRQIMNGGPWSFDKSLLALVSPRGIDDPLLLDFTYNAFWVQILNV 132
           LG+N F+ +F S  +KR IM GGPW FD++L+ L  P GI D    DF++ +FWVQI +V
Sbjct: 75  LGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKKQDFSHVSFWVQIHDV 134

Query: 133 SFHCLTSTMARRLGSLVGMVEEVHGEGHGEWLGSVMHVRVLIDLSKPLRRGVRLKISENK 192
              C++  MA  LG ++G VEEV  +  GE  G  + +R+ +D++KPL++ + L+  E  
Sbjct: 135 PIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDITKPLKKIIELEQEEED 194

Query: 193 YQWCP--VGYEKLPDFCYQCGRIGHLHRDCELVLSELGAASPLQYGEWMRA 242
               P  V YE+LPDFC+ CGRIGH +R+C    S+  +   L YG W++A
Sbjct: 195 ADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQ--SKDELAYGPWLKA 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149484.11.2e-6542.86uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_022156711.13.3e-5246.61uncharacterized protein LOC111023555 [Momordica charantia][more]
XP_022155933.17.4e-4443.28uncharacterized protein LOC111022932 [Momordica charantia][more]
TXG54013.19.6e-4428.37hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_024035600.11.1e-4234.16uncharacterized protein LOC112096408 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7655.6e-6642.86uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DVS41.6e-5246.61uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DP893.6e-4443.28uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A5C7H9Y24.6e-4428.37CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A1S8AC257.4e-4238.53CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 174..221
e-value: 4.6E-14
score: 51.9
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 33..172
e-value: 7.1E-18
score: 64.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..284
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 11..223
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 11..223
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 207..220
score: 10.295547

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028688.1Lag0028688.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding