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Lag0028651 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCACACGACGAGGCTAGGTAGATACTTGGGCCTCGATATCGACTTTGGGCCAAACAAACAAGGAGTATTTGAGAATTTATCAAAGAGGATCAATATAAGAATCAATGGATGGGTGGAGCAATACCTCTCCCAAGTCGGAAAAGAAGTTTTGTTAAAAGCGGTGGGGCTAGCACTACCAATATACACAATGAACTACTTCAAGCTGCCGATCAGAGTCTGCAAGGAAATCAATAACAAACTTGTGCGTTACTGGTGGCAGAAAAAAAAGGAAAAGGGGAGCATTCATTGGGGTTCTTGGGAGGATCTAATAAAACCTAAGATCACTGGTGGCTTGAACCTGAAGGACATCCATTGTTTTAACCTTGCACTATTGGCGAAGCAAGGATGGAGGGTCCTTAAATACCCAGGCAACCTACTCGCAAGAATATTCAAAGCCCGTTATTTCAATCACGTTGATTTTCTAGAGGCAACAGCCATAGGGAGAGCATCATGGGGTTGGCGTAGCATCCTAGGAGAGACGTCTTACGGCAAGGGCTCCGCTGGCGAATAA ATGGAGCACACGACGAGGCTAGGTAGATACTTGGGCCTCGATATCGACTTTGGGCCAAACAAACAAGGAGTATTTGAGAATTTATCAAAGAGGATCAATATAAGAATCAATGGATGGGTGGAGCAATACCTCTCCCAAGTCGGAAAAGAAGTTTTGTTAAAAGCGGTGGGGCTAGCACTACCAATATACACAATGAACTACTTCAAGCTGCCGATCAGAGTCTGCAAGGAAATCAATAACAAACTTGTGCGTTACTGGTGGCAGAAAAAAAAGGAAAAGGGGAGCATTCATTGGGGTTCTTGGGAGGATCTAATAAAACCTAAGATCACTGGTGGCTTGAACCTGAAGGACATCCATTGTTTTAACCTTGCACTATTGGCGAAGCAAGGATGGAGGGTCCTTAAATACCCAGGCAACCTACTCGCAAGAATATTCAAAGCCCGTTATTTCAATCACGTTGATTTTCTAGAGGCAACAGCCATAGGGAGAGCATCATGGGGTTGGCGTAGCATCCTAGGAGAGACGTCTTACGGCAAGGGCTCCGCTGGCGAATAA ATGGAGCACACGACGAGGCTAGGTAGATACTTGGGCCTCGATATCGACTTTGGGCCAAACAAACAAGGAGTATTTGAGAATTTATCAAAGAGGATCAATATAAGAATCAATGGATGGGTGGAGCAATACCTCTCCCAAGTCGGAAAAGAAGTTTTGTTAAAAGCGGTGGGGCTAGCACTACCAATATACACAATGAACTACTTCAAGCTGCCGATCAGAGTCTGCAAGGAAATCAATAACAAACTTGTGCGTTACTGGTGGCAGAAAAAAAAGGAAAAGGGGAGCATTCATTGGGGTTCTTGGGAGGATCTAATAAAACCTAAGATCACTGGTGGCTTGAACCTGAAGGACATCCATTGTTTTAACCTTGCACTATTGGCGAAGCAAGGATGGAGGGTCCTTAAATACCCAGGCAACCTACTCGCAAGAATATTCAAAGCCCGTTATTTCAATCACGTTGATTTTCTAGAGGCAACAGCCATAGGGAGAGCATCATGGGGTTGGCGTAGCATCCTAGGAGAGACGTCTTACGGCAAGGGCTCCGCTGGCGAATAA MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSILGETSYGKGSAGE Homology
BLAST of Lag0028651 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 198.7 bits (504), Expect = 4.2e-47 Identity = 84/165 (50.91%), Postives = 120/165 (72.73%), Query Frame = 0
BLAST of Lag0028651 vs. NCBI nr
Match: CAB4269469.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46 Identity = 86/165 (52.12%), Postives = 114/165 (69.09%), Query Frame = 0
BLAST of Lag0028651 vs. NCBI nr
Match: XP_021818901.1 (uncharacterized protein LOC110760860 [Prunus avium]) HSP 1 Score: 195.7 bits (496), Expect = 3.6e-46 Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 0
BLAST of Lag0028651 vs. NCBI nr
Match: CAB4279811.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 194.9 bits (494), Expect = 6.1e-46 Identity = 82/172 (47.67%), Postives = 119/172 (69.19%), Query Frame = 0
BLAST of Lag0028651 vs. NCBI nr
Match: CAB4310240.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 194.9 bits (494), Expect = 6.1e-46 Identity = 82/172 (47.67%), Postives = 119/172 (69.19%), Query Frame = 0
BLAST of Lag0028651 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.4e-21 Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 0
BLAST of Lag0028651 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14 Identity = 46/151 (30.46%), Postives = 78/151 (51.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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