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Lag0028643 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTTCTTCCCGAAGAAAATGGCTCTTAATGGTTCTGCAACCCATCCTACAAGGTAATTAAACTTTAATATATATGTTTTATTATATATTTGATTAATTTGGGGCTTTTTCAGACTGGAAGGGAAGGTGGCGATTATCATCGACGGGGCAAGCGGGACCGGAGCTAGCACAGTGCGCATTTTTCATGAAAACGGAGCGAAAGTGGTGATCGCCGATATCCAAGACGAAGCGGGCCAGAAAATCGCCGATGAACTCGGCGAGGGCGTTAGCTACGTGCACTGCGACGTCTCCAAGGAGGAAGACGTCAGCAATCTGGTGGACGCCGTCGTCTACCGGCACGGCAAGCTCAACATCATGTACAGCAACGCCGATGTCATCGACCGTCCATTCGCGACATACTCGATGTTACCAAAGCTGACATGGACAAGGTATTTTTGAAACATGATTTCTTTTTAAATTCTATTTTCATTCTAAATTTTTATGATTATTTTTTCATTCTAAATTAAAGAGAAAAAAAAACTGTCGCCGCCGGCGACAGTATGTGGGCGACGCGACCATCAGAGGTTTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAGGATGAAGAAGATGATTGA ATGCTTTTCTTCCCGAAGAAAATGGCTCTTAATGGTTCTGCAACCCATCCTACAAGACTGGAAGGGAAGGTGGCGATTATCATCGACGGGGCAAGCGGGACCGGAGCTAGCACAGTGCGCATTTTTCATGAAAACGGAGCGAAAGTGGTGATCGCCGATATCCAAGACGAAGCGGGCCAGAAAATCGCCGATGAACTCGGCGAGGGCGTTAGCTACGTGCACTGCGACGTCTCCAAGGAGGAAGACGTCAGCAATCTGGTGGACGCCGTCGTCTACCGGCACGGCAAGCTCAACATCATGTACAGCAACGCCGATGTCATCGACCGTCCATTCGCGACATACTCGATGTTACCAAAGCTGACATGGACAAGAAAAAAAAACTGTCGCCGCCGGCGACAGTATGTGGGCGACGCGACCATCAGAGGTTTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAGGATGAAGAAGATGATTGA ATGCTTTTCTTCCCGAAGAAAATGGCTCTTAATGGTTCTGCAACCCATCCTACAAGACTGGAAGGGAAGGTGGCGATTATCATCGACGGGGCAAGCGGGACCGGAGCTAGCACAGTGCGCATTTTTCATGAAAACGGAGCGAAAGTGGTGATCGCCGATATCCAAGACGAAGCGGGCCAGAAAATCGCCGATGAACTCGGCGAGGGCGTTAGCTACGTGCACTGCGACGTCTCCAAGGAGGAAGACGTCAGCAATCTGGTGGACGCCGTCGTCTACCGGCACGGCAAGCTCAACATCATGTACAGCAACGCCGATGTCATCGACCGTCCATTCGCGACATACTCGATGTTACCAAAGCTGACATGGACAAGAAAAAAAAACTGTCGCCGCCGGCGACAGTATGTGGGCGACGCGACCATCAGAGGTTTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAGGATGAAGAAGATGATTGA MLFFPKKMALNGSATHPTRLEGKVAIIIDGASGTGASTVRIFHENGAKVVIADIQDEAGQKIADELGEGVSYVHCDVSKEEDVSNLVDAVVYRHGKLNIMYSNADVIDRPFATYSMLPKLTWTRKKNCRRRRQYVGDATIRGLKKKMEGLREEDEEDD Homology
BLAST of Lag0028643 vs. NCBI nr
Match: XP_023527968.1 (tropinone reductase-like 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38 Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Lag0028643 vs. NCBI nr
Match: XP_022934668.1 (tropinone reductase-like 1 isoform X2 [Cucurbita moschata]) HSP 1 Score: 169.1 bits (427), Expect = 3.1e-38 Identity = 84/105 (80.00%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Lag0028643 vs. NCBI nr
Match: XP_022983067.1 (tropinone reductase-like 1 [Cucurbita maxima]) HSP 1 Score: 167.9 bits (424), Expect = 6.9e-38 Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Lag0028643 vs. NCBI nr
Match: XP_004136499.1 (tropinone reductase-like 1 [Cucumis sativus] >KGN59173.1 hypothetical protein Csa_001700 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37 Identity = 84/105 (80.00%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of Lag0028643 vs. NCBI nr
Match: XP_008442887.1 (PREDICTED: tropinone reductase-like 1 [Cucumis melo] >KAA0043843.1 tropinone reductase-like 1 [Cucumis melo var. makuwa] >TYK25291.1 tropinone reductase-like 1 [Cucumis melo var. makuwa]) HSP 1 Score: 165.6 bits (418), Expect = 3.4e-37 Identity = 84/105 (80.00%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of Lag0028643 vs. ExPASy Swiss-Prot
Match: H9BFQ0 (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.4e-27 Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Lag0028643 vs. ExPASy Swiss-Prot
Match: H9BFQ1 (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26 Identity = 57/90 (63.33%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Lag0028643 vs. ExPASy Swiss-Prot
Match: A3F5F0 (Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21 Identity = 53/106 (50.00%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of Lag0028643 vs. ExPASy Swiss-Prot
Match: Q94KL8 (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21 Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 0
BLAST of Lag0028643 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21 Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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