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Lag0028629 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGGGATGGATTCCATAAAGGGAGATATTGGGATGGATTCTATTATTTTCCAGTCCGACGTCCGCTCCATCGATCCTGTCGGCGGATGCTACTGGATAATTCGAGACCTCCAGTGGCAGATTGAGTACAGCAAGACAGAATTTGACCTCGTGCTCCATCAATTGGCGATTTGTAAGCAACAGGCCGCCACAGCTGCTGCGACGACGACCGCGATTCTGGAGGCGGATCCGATGAGCGGATACGGCGGAATCGAGCACCAATTTGTGGAGGGATATGAAGGGGAAGGGTTCGTGGTTGGGGAAAATGAGAATCGAGAGTGTTTGGAAGAGGAAGTGGAGGTTTGGGGGATTTAGGATTCGGGAATTTCGTCGTCGTCTTCGTTGCAATTGAAACAGGGCGACGACTCTCTTAATGATTTTGATGGTATCATTAACAGATCTCGTCATCGGTGAGATCTGGTCGCCGTCGAAGCTGTCGTGGAAGATTTGGTTGCCGTCGATAA ATGAGTGGGATGGATTCCATAAAGGGAGATATTGGGATGGATTCTATTATTTTCCAGTCCGACGTCCGCTCCATCGATCCTGTCGGCGGATGCTACTGGATAATTCGAGACCTCCAGTGGCAGATTGAGTACAGCAAGACAGAATTTGACCTCGTGCTCCATCAATTGGCGATTTGTAAGCAACAGGCCGCCACAGCTGCTGCGACGACGACCGCGATTCTGGAGGCGGATCCGATGAGCGGATACGGCGGAATCGAGCACCAATTTGTGGAGGGATATGAAGGGGAAGGGTTCGTGGTTGGGGAAAATGAGAATCGAGAGTGTTTGGAAGAGGAAGTGGAGATCTCGTCATCGGTGAGATCTGGTCGCCGTCGAAGCTGTCGTGGAAGATTTGGTTGCCGTCGATAA ATGAGTGGGATGGATTCCATAAAGGGAGATATTGGGATGGATTCTATTATTTTCCAGTCCGACGTCCGCTCCATCGATCCTGTCGGCGGATGCTACTGGATAATTCGAGACCTCCAGTGGCAGATTGAGTACAGCAAGACAGAATTTGACCTCGTGCTCCATCAATTGGCGATTTGTAAGCAACAGGCCGCCACAGCTGCTGCGACGACGACCGCGATTCTGGAGGCGGATCCGATGAGCGGATACGGCGGAATCGAGCACCAATTTGTGGAGGGATATGAAGGGGAAGGGTTCGTGGTTGGGGAAAATGAGAATCGAGAGTGTTTGGAAGAGGAAGTGGAGATCTCGTCATCGGTGAGATCTGGTCGCCGTCGAAGCTGTCGTGGAAGATTTGGTTGCCGTCGATAA MSGMDSIKGDIGMDSIIFQSDVRSIDPVGGCYWIIRDLQWQIEYSKTEFDLVLHQLAICKQQAATAAATTTAILEADPMSGYGGIEHQFVEGYEGEGFVVGENENRECLEEEVEISSSVRSGRRRSCRGRFGCRR Homology
BLAST of Lag0028629 vs. NCBI nr
Match: XP_038899918.1 (LOB domain-containing protein 22 [Benincasa hispida]) HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36 Identity = 85/114 (74.56%), Postives = 94/114 (82.46%), Query Frame = 0
BLAST of Lag0028629 vs. NCBI nr
Match: XP_011659803.2 (LOB domain-containing protein 22 [Cucumis sativus] >KGN45524.1 hypothetical protein Csa_015647 [Cucumis sativus]) HSP 1 Score: 161.0 bits (406), Expect = 7.2e-36 Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0
BLAST of Lag0028629 vs. NCBI nr
Match: XP_016902828.1 (PREDICTED: LOB domain-containing protein 22, partial [Cucumis melo]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0
BLAST of Lag0028629 vs. NCBI nr
Match: KAG7014013.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of Lag0028629 vs. NCBI nr
Match: KAG6575472.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of Lag0028629 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.2e-10 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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