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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATTGGGATGCTCGACATGCTTCAATCGTCCTTGGTACACCCATCAACGGAGGTCCAAATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTTGTGGTAAGAATTTATACTATAAGTTCATTATTCGACAATTTCTAATCTACATTGTATTGATTTGGTTTTCAATTTTTTTTTCAGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCAATCGATAAACTAACATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCGGATGAAGATGATTGA mRNA sequence ATGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATTGGGATGCTCGACATGCTTCAATCGTCCTTGGTACACCCATCAACGGAGGTCCAAATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTTGTGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCAATCGATAAACTAACATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCGGATGAAGATGATTGA Coding sequence (CDS) ATGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATTGGGATGCTCGACATGCTTCAATCGTCCTTGGTACACCCATCAACGGAGGTCCAAATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTTGTGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCAATCGATAAACTAACATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCGGATGAAGATGATTGA Protein sequence MKLGQLFGSTNFNWDARHASIVLGTPINGGPNVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLTSVYRVRRPVGDIPVEDDAHAEDHNNPDEDD
Homology
BLAST of Lag0028626 vs. NCBI nr
Match: XP_038891623.1 (serine/threonine-protein phosphatase 7 long form homolog [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 14 WDARHASIVLGTPINGGPNVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSI 73 W+ RH +V G PIN G E GY EWY+ +SR +IT+A A+YH + NLSI ++ + Sbjct: 207 WENRHCLVVNGPPINNGVGTEPGYIEWYSTVSRLYITKAEASYHLLAELPNLSISTQRVL 266
Query: 74 DKLTSVYRVRRPVGDIPVED 94 +LTS+YRVR GD+P+E+ Sbjct: 267 RRLTSIYRVRYFDGDVPMEE 286
BLAST of Lag0028626 vs. NCBI nr
Match: XP_022159786.1 (serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia] >XP_022159787.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0 Query: 14 WDARHASIVLGTPINGGPNVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSI 73 W+ RH I+ G IN +VE Y WY I+RR+IT+AGA+Y+++ N N++ GR+S+ Sbjct: 92 WENRHNVIIQGQHINRDEDVEPRYYCWYYSITRRYITRAGASYNYLNNLPNMTDLGRRSL 151
Query: 74 DKLTSVYRVRRPVGDIPVEDDAHAEDHNNPDED 107 LT+ YRVR G + H N P D Sbjct: 152 QNLTNAYRVRHLDGP-ERREKRHQRGPNIPTND 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038891623.1 | 1.0e-13 | 47.50 | serine/threonine-protein phosphatase 7 long form homolog [Benincasa hispida] | [more] |
XP_022159786.1 | 2.3e-08 | 39.78 | serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia] >... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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