Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTGGGCCTTGGCTATTCGACAAGCATCTGATGGTCCTTGAAATTCCTGCGAAAAATGAAAGAATATCAAGTTTTAAATTCCAAGAAGCCATATTTTGGATAAGACTGATTAATCTCCCGATGGGCTATGAAAGTAGATTAGTGGCAGAAAAAATAGGTAACTCAATTGGGAAGTTCTTGGAAATGGACTGTGAAAGGAAGGAGTTTTGTTGGGGAAACAGTATCAGAATCAAGGTCAGTATTGATATTACGAAGCCTCTTTTGAGAGGTTTTATGTTAAGAGGACTCGAGATTGAAGAAGATTGTTGGGTGACAATCAAGTACGAAAGATTACCTGAGTTCTGTTTTGGTTGTGGTATAATTGGGCATGGATTGAAAGATTGCACATTTGGAAAGGAGAGGGAAAGACAGAATAGTGGTGAGTTTGGGAGCTGGCTTAAGTTTCAGGGCTTCTTCAAACAAACAAAGAAAGAAAACTCTCCACCAAGAGACCAAGAGTTTGATCAGACAAAGGGAAATAATGAGGAATCAAACATACCAACGGATATGAACAAAGCCCTGGAAATAGAAAGAGATAAGGATATTGTTATATGGCAAGTGAAAAATAACCAGGAGGATACCTTGAGTAATGAAGGGACATAA
mRNA sequence
ATGAAGAGTGGGCCTTGGCTATTCGACAAGCATCTGATGGTCCTTGAAATTCCTGCGAAAAATGAAAGAATATCAAGTTTTAAATTCCAAGAAGCCATATTTTGGATAAGACTGATTAATCTCCCGATGGGCTATGAAAGTAGATTAGTGGCAGAAAAAATAGGTAACTCAATTGGGAAGTTCTTGGAAATGGACTGTGAAAGGAAGGAGTTTTGTTGGGGAAACAGTATCAGAATCAAGGTCAGTATTGATATTACGAAGCCTCTTTTGAGAGGTTTTATGTTAAGAGGACTCGAGATTGAAGAAGATTGTTGGGTGACAATCAAGTACGAAAGATTACCTGAGTTCTGTTTTGGTTGTGGTATAATTGGGCATGGATTGAAAGATTGCACATTTGGAAAGGAGAGGGAAAGACAGAATAGTGGTGAGTTTGGGAGCTGGCTTAAGTTTCAGGGCTTCTTCAAACAAACAAAGAAAGAAAACTCTCCACCAAGAGACCAAGAGTTTGATCAGACAAAGGGAAATAATGAGGAATCAAACATACCAACGGATATGAACAAAGCCCTGGAAATAGAAAGAGATAAGGATATTGTTATATGGCAAGTGAAAAATAACCAGGAGGATACCTTGAGTAATGAAGGGACATAA
Coding sequence (CDS)
ATGAAGAGTGGGCCTTGGCTATTCGACAAGCATCTGATGGTCCTTGAAATTCCTGCGAAAAATGAAAGAATATCAAGTTTTAAATTCCAAGAAGCCATATTTTGGATAAGACTGATTAATCTCCCGATGGGCTATGAAAGTAGATTAGTGGCAGAAAAAATAGGTAACTCAATTGGGAAGTTCTTGGAAATGGACTGTGAAAGGAAGGAGTTTTGTTGGGGAAACAGTATCAGAATCAAGGTCAGTATTGATATTACGAAGCCTCTTTTGAGAGGTTTTATGTTAAGAGGACTCGAGATTGAAGAAGATTGTTGGGTGACAATCAAGTACGAAAGATTACCTGAGTTCTGTTTTGGTTGTGGTATAATTGGGCATGGATTGAAAGATTGCACATTTGGAAAGGAGAGGGAAAGACAGAATAGTGGTGAGTTTGGGAGCTGGCTTAAGTTTCAGGGCTTCTTCAAACAAACAAAGAAAGAAAACTCTCCACCAAGAGACCAAGAGTTTGATCAGACAAAGGGAAATAATGAGGAATCAAACATACCAACGGATATGAACAAAGCCCTGGAAATAGAAAGAGATAAGGATATTGTTATATGGCAAGTGAAAAATAACCAGGAGGATACCTTGAGTAATGAAGGGACATAA
Protein sequence
MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSGEFGSWLKFQGFFKQTKKENSPPRDQEFDQTKGNNEESNIPTDMNKALEIERDKDIVIWQVKNNQEDTLSNEGT
Homology
BLAST of Lag0028621 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 166.8 bits (421), Expect = 2.1e-37
Identity = 76/187 (40.64%), Postives = 115/187 (61.50%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
MK+GPW FDK L+VL+ P ++ IS +F FWI L +LPM + ++ +A ++GN+IG
Sbjct: 95 MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
F+++DC K F WG S+RI+V IDITKPL RG + CW+ I+YERLP+FC+ C
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214
Query: 121 GIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKG 180
G+IGH DC + + + + E+G WL+F G ++ +K SP R+ +
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSM 274
Query: 181 NNEESNI 182
N++E +
Sbjct: 275 NSKERGV 281
BLAST of Lag0028621 vs. NCBI nr
Match:
XP_042988686.1 (uncharacterized protein LOC122316216 [Carya illinoinensis])
HSP 1 Score: 144.8 bits (364), Expect = 8.5e-31
Identity = 65/160 (40.62%), Postives = 98/160 (61.25%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
++ GPW FDKHL++++ N+++ K +EA FW+RL +LP+ + V +IG IG+
Sbjct: 93 LREGPWSFDKHLLLVQEVDGNKQVQQIKIREASFWVRLHDLPLRARNDRVGHRIGAKIGR 152
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
LE+D + E WG+ +R++VS+DI KPLLRG + E+ CWV YERL FCF C
Sbjct: 153 VLEVDLDSGELAWGDFLRVRVSLDIRKPLLRGTRF-SMGFEDSCWVRFSYERLSTFCFYC 212
Query: 121 GIIGHGLKDCTFGKERERQ-------NSGEFGSWLKFQGF 154
G +GHG ++C ER+ Q +S +GSWL+ +
Sbjct: 213 GCLGHGDREC----ERKTQAVPGASDDSFPYGSWLRASSY 247
BLAST of Lag0028621 vs. NCBI nr
Match:
XP_035543083.1 (uncharacterized protein LOC118346304 [Juglans regia])
HSP 1 Score: 137.5 bits (345), Expect = 1.4e-28
Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
++ GPW FDK L++++ ++++ K QEA FW+R+ +LP+ + V E+IG IGK
Sbjct: 119 LREGPWSFDKQLVLVQEVDGSKQVHQIKIQEATFWVRIHDLPLRARNAYVGERIGKKIGK 178
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
E+D + E WG +++++++D+ KPLLRG + E CWV YERLP FC+ C
Sbjct: 179 VEEVDLAKGEVAWGEFLQVRITLDVMKPLLRGTKFT-MGNGESCWVRFSYERLPNFCYLC 238
Query: 121 GIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF 154
G +GHG ++C E + S +G+WL+ +
Sbjct: 239 GCLGHGDRECGLRQTAAEGDNMGSVPYGAWLRASSY 273
BLAST of Lag0028621 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 133.3 bits (334), Expect = 2.6e-27
Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
+ GPW FDKHL++L N + S + FW+ + NLP+ ++ V E +GN++G+
Sbjct: 93 LSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQ 152
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
F++MD E WG ++RI+V++D+ KPL RG L L E WV KYERLP +C+ C
Sbjct: 153 FIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKL-ALSSAEPIWVDFKYERLPIYCYFC 212
Query: 121 GIIGHGLKDC---TFGKERERQNSGEFGSWLK 150
G +GH ++C + R +S ++G+WL+
Sbjct: 213 GRLGHSERECDDKLSSADGSRVDSLQYGAWLR 243
BLAST of Lag0028621 vs. NCBI nr
Match:
TXG60685.1 (hypothetical protein EZV62_015258 [Acer yangbiense])
HSP 1 Score: 132.9 bits (333), Expect = 3.3e-27
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 0
Query: 4 GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLE 63
GPW FD++L+VLE P IS F FW+++ NLP+ +R +A + IG +E
Sbjct: 97 GPWHFDRNLIVLEKPTGTGDISKLSFHMVEFWVQIHNLPLMCMNRRMARYLAEQIGTVVE 156
Query: 64 MDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGCGII 123
+ + +E CWG IR+KV IDI+KPLLR L + E + YERLPEFC+ CGII
Sbjct: 157 LPTDSRE-CWGRFIRVKVRIDISKPLLRCLRLNLDDSGEVTTAILLYERLPEFCYACGII 216
Query: 124 GHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQ 183
GHGL+DC R G ++GSWL+ +Q+K NS PP + +Q
Sbjct: 217 GHGLRDCPDDDARLEALEGVSTKYGSWLR-AASVEQSKNRNSRNEKKPDDIPPSSYQENQ 276
Query: 184 TKGNNEESNIPTDMNKALEIERDKDIV--IWQVKNNQED 209
T N++ + +++ ER + ++ + V N ED
Sbjct: 277 TAKNSDTNR--QSEQYSIDHERTQQLLTALVPVSNTTED 311
BLAST of Lag0028621 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 1.0e-37
Identity = 76/187 (40.64%), Postives = 115/187 (61.50%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
MK+GPW FDK L+VL+ P ++ IS +F FWI L +LPM + ++ +A ++GN+IG
Sbjct: 95 MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
F+++DC K F WG S+RI+V IDITKPL RG + CW+ I+YERLP+FC+ C
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214
Query: 121 GIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKG 180
G+IGH DC + + + + E+G WL+F G ++ +K SP R+ +
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSM 274
Query: 181 NNEESNI 182
N++E +
Sbjct: 275 NSKERGV 281
BLAST of Lag0028621 vs. ExPASy TrEMBL
Match:
A0A6P9EFS2 (uncharacterized protein LOC118346304 OS=Juglans regia OX=51240 GN=LOC118346304 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 6.6e-29
Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
++ GPW FDK L++++ ++++ K QEA FW+R+ +LP+ + V E+IG IGK
Sbjct: 119 LREGPWSFDKQLVLVQEVDGSKQVHQIKIQEATFWVRIHDLPLRARNAYVGERIGKKIGK 178
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
E+D + E WG +++++++D+ KPLLRG + E CWV YERLP FC+ C
Sbjct: 179 VEEVDLAKGEVAWGEFLQVRITLDVMKPLLRGTKFT-MGNGESCWVRFSYERLPNFCYLC 238
Query: 121 GIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF 154
G +GHG ++C E + S +G+WL+ +
Sbjct: 239 GCLGHGDRECGLRQTAAEGDNMGSVPYGAWLRASSY 273
BLAST of Lag0028621 vs. ExPASy TrEMBL
Match:
A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 9.5e-28
Identity = 57/152 (37.50%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 1 MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGK 60
+ +GPW FDK+L++L++ ++++ + EA FWI++ LP + A +GN++G
Sbjct: 35 LMNGPWAFDKNLVLLKLFDGDQKVQGMQLTEASFWIQIHELPFKGMNEETATSVGNALGV 94
Query: 61 FLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGC 120
E+D WG +R++V ID++ PLLR ++ L EE WVT+KYE+LP FC+ C
Sbjct: 95 LEEIDIPEDGITWGEFMRVQVRIDVSMPLLRRQRVK-LGKEESIWVTLKYEKLPTFCYNC 154
Query: 121 GIIGHGLKDCTFGKERERQNSG---EFGSWLK 150
GI+GH ++C + E+ G E+GSWL+
Sbjct: 155 GILGHSERECRLVTQHEKSKDGNHYEYGSWLR 185
BLAST of Lag0028621 vs. ExPASy TrEMBL
Match:
A0A5C7HUW5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015258 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.6e-27
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 0
Query: 4 GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLE 63
GPW FD++L+VLE P IS F FW+++ NLP+ +R +A + IG +E
Sbjct: 97 GPWHFDRNLIVLEKPTGTGDISKLSFHMVEFWVQIHNLPLMCMNRRMARYLAEQIGTVVE 156
Query: 64 MDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGCGII 123
+ + +E CWG IR+KV IDI+KPLLR L + E + YERLPEFC+ CGII
Sbjct: 157 LPTDSRE-CWGRFIRVKVRIDISKPLLRCLRLNLDDSGEVTTAILLYERLPEFCYACGII 216
Query: 124 GHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQ 183
GHGL+DC R G ++GSWL+ +Q+K NS PP + +Q
Sbjct: 217 GHGLRDCPDDDARLEALEGVSTKYGSWLR-AASVEQSKNRNSRNEKKPDDIPPSSYQENQ 276
Query: 184 TKGNNEESNIPTDMNKALEIERDKDIV--IWQVKNNQED 209
T N++ + +++ ER + ++ + V N ED
Sbjct: 277 TAKNSDTNR--QSEQYSIDHERTQQLLTALVPVSNTTED 311
BLAST of Lag0028621 vs. ExPASy TrEMBL
Match:
A0A5C7HLB9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018455 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.8e-27
Identity = 68/162 (41.98%), Postives = 94/162 (58.02%), Query Frame = 0
Query: 4 GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLE 63
GPW F L+VLE P + I+ F +A FW+++ +P+ +R A+ + IG+ ++
Sbjct: 97 GPWHFGNSLIVLENPVGSGNIAQLAFNKADFWVQIHEIPILCMNRKTAKWLAEHIGEVVD 156
Query: 64 MDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKYERLPEFCFGCGII 123
+ E +E CWG +R+KV IDITKPL R L+ + EE V++KYERLPEFCF CG I
Sbjct: 157 IPSESRE-CWGKYMRVKVRIDITKPLKRWLRLKLGKTEEVTRVSLKYERLPEFCFTCGKI 216
Query: 124 GHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS 163
GHG+K C + R+ G FGSWLK K K S
Sbjct: 217 GHGIKVCIDEEARKMVVEGYLNRFGSWLKAPVLEKSKSKSKS 257
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 2.1e-37 | 40.64 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_042988686.1 | 8.5e-31 | 40.63 | uncharacterized protein LOC122316216 [Carya illinoinensis] | [more] |
XP_035543083.1 | 1.4e-28 | 36.54 | uncharacterized protein LOC118346304 [Juglans regia] | [more] |
XP_028122006.1 | 2.6e-27 | 38.16 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
TXG60685.1 | 3.3e-27 | 36.53 | hypothetical protein EZV62_015258 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 1.0e-37 | 40.64 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6P9EFS2 | 6.6e-29 | 36.54 | uncharacterized protein LOC118346304 OS=Juglans regia OX=51240 GN=LOC118346304 P... | [more] |
A0A2N9E949 | 9.5e-28 | 37.50 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389... | [more] |
A0A5C7HUW5 | 1.6e-27 | 36.53 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01525... | [more] |
A0A5C7HLB9 | 2.8e-27 | 41.98 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018455 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |