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Lag0028619 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAGTTGATCCCAACTTGTGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCAAAGGAGTACATTCAATGGGAAAGGCAAGTTGATCATGTCTTTGATTGTTGCACTTTAAGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGCCATTACTTGGTGGGATAAATTGTTTTTGGGTAGGAGGAACCTTGAACATCCAATAGATTCATGGAGTGATTTGAAGCAATTAATGCGAGAGCACTTTGTTCCTAAGTTTTCTATAACTTGCGGACTTTGAGACAAGGGAGCAAAAGTGTAGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTACGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGAGATTTAGACGAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTTACAAGGTACACTAAACCTAAACCAATTTCAAATATTCATTCATCTTTGAAAATGTTAGTTTACCCATTAAAATACAACATAATATTGAGGTAGGAAGTGGTGAAATTAAAATTGAAATGCAACCAACACATGTTAATGATTTCTTGTCTAGTAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGTTATACCTACTCATGATGAAGTACATGTTGATGTGTGTGAGTTAGGGAAAAAGGCACAAAAGGCCAAGACAAAAGCATGTGAATTGATTGAAAAAGAATCTTGTGAGACAATGAGTGAAAGAGAAAAGCAGATATTAGTTTATGGCCTAAAGAGAAAAATGAGAGAAAAGCCAAGAATATGAGTTTGTGTGAAACAGTTTGTGAGGTTAAATATGTTTTGTTTTCAAAACAAAATATTTTTGATCTTTTATACAAAGGAACTTGTTTTCTCACCGGTGAGCTCAAACCATGTTTTTCTAGTGTTTCTCTTGAGTTCTTACAGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAAATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAATGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGTCAGTTACATTTTCAATGCCGCTGATTTTCGTCCATTTGATGTAGGAGACCCTTTTGATTTGAGGACAAATCCTCTTGAAGAAGGGGAGAATGATATGAACTCTACCAATAAAGAACTCCAATAGAGTTGAAGGTGTTGATTTCTATTATGTGTTTGAGCTTCAAGATGGAACACATTAAATGCACTCCGGGTTCATGAAAGTGCATTTAATGCAAATCAAGCATCAATTGATGGAACTATACTTTAAGCTACTTCAAAGGGAAGCTTAATTAATTCATGGAATGTTACACACAAAATGAAGGTTGACCAAGACTTCAATTCTCGATTTATGGAGTCCATCATGTAATTTTTCAGTTTTTTGAGTCTTTTCAATGTTACATAGGTTACTTTTGTTAGTGGCTCTTTAATACATTAAAGTTAGGAAGGTTACACACTTTAAGGTGACCTAGTGGCTGAATTTAGGTTATATTTTGGAGGCTATATAAAAAACCATCTTTGATGTAACACAAAAGAAGATTTTGATGATGTTTCAATGAAATTGAGTCTTTTGAGCCTAAAGGCCATGAGCAACTTTCTTTGCATATCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCTTTGATCAACTACTTGTGGAGTGATTCGAATCTCGAGTTTAGAAACGAGTTTTCTCTACTCTTGATCTTGATCATCAAGGTAAATCCGTTTCTATCTTCTTCCTTGGGATGAAATCATCTTGGTTTTGGGTTTTTGATATTGAGTTCTATGGGTCTTGTTTGCTAGCAAGGTTTTTAGATCCAATCATCAAGGGTTTCTTATCACTACGCATAGATGAAGTAAATAACCATAGACATGAAAGAATCCATAAATATGACAAGAATGGTCTACAACAGTGCTAAAATGTAAAAGGAACAAAGAAATCGCAAAAGATCAAAATTATAACCTAACGACGGACTAAACCAAGGCTACTTATTTATAGAAAACACGACGGCGTCAAGACGCCAAGGCAACGTATCGACGCTGCGAACTTTATACTCCGGCCAATTTTCGCATCGGCGTCGAGACGCCAAGGCAGCGTCTCGACACCAGCCTTGATTCTCGACTTGCTGCTTTAATTCTCGGTCTTGTCCCGCTTCTTCTCGGTACGGGGCTTCAATCTTCAGCTTTTGGTGTCATTCTTTAG ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAACAAGGGAGCAAAAGTGTAGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTACGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGAGATTTAGACGAGATGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAAATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAATGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGATCATTCAAGTAGCTTTGATCAACTACTTGTGGAGTGATTCGAATCTCGAGTTTAGAAACGAGTTTTCTCTACTCTTGATCTTGATCATCAAGAAAACACGACGGCGTCAAGACGCCAAGGCAACGTATCGACGCTGCGAACTTTATACTCCGGCCAATTTTCGCATCGGCGTCGAGACGCCAAGGCAGCGTCTCGACACCAGCCTTGATTCTCGACTTGCTGCTTTAATTCTCGGTCTTGTCCCGCTTCTTCTCGGTACGGGGCTTCAATCTTCAGCTTTTGGTGTCATTCTTTAG ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAACAAGGGAGCAAAAGTGTAGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTACGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGAGATTTAGACGAGATGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAAATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAATGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGATCATTCAAGTAGCTTTGATCAACTACTTGTGGAGTGATTCGAATCTCGAGTTTAGAAACGAGTTTTCTCTACTCTTGATCTTGATCATCAAGAAAACACGACGGCGTCAAGACGCCAAGGCAACGTATCGACGCTGCGAACTTTATACTCCGGCCAATTTTCGCATCGGCGTCGAGACGCCAAGGCAGCGTCTCGACACCAGCCTTGATTCTCGACTTGCTGCTTTAATTCTCGGTCTTGTCCCGCTTCTTCTCGGTACGGGGCTTCAATCTTCAGCTTTTGGTGTCATTCTTTAG MSQEDFARLHRSMEKMTMQFEKLDARIKSVEKQPAFLIRKERSNPMHHKEYWEVKEKNMVEVSKLSNGEIQETFIKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQHMKLMPMHFLRGKTPNLLLSSSMAARIRCSNRVIGFGNTIGRILILLIRNPSGDPNAVYQSHPMTTKLLYKARGMIIQVALINYLWSDSNLEFRNEFSLLLILIIKKTRRRQDAKATYRRCELYTPANFRIGVETPRQRLDTSLDSRLAALILGLVPLLLGTGLQSSAFGVIL Homology
BLAST of Lag0028619 vs. NCBI nr
Match: KAA0038045.1 (uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa] >TYK20558.1 uncharacterized protein E5676_scaffold237G001470 [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-08 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Lag0028619 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida]) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-08 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Lag0028619 vs. NCBI nr
Match: XP_023518111.1 (beta-galactosidase 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-07 Identity = 34/58 (58.62%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of Lag0028619 vs. NCBI nr
Match: XP_022158803.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-07 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Lag0028619 vs. NCBI nr
Match: XP_022157414.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-07 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Lag0028619 vs. ExPASy TrEMBL
Match: A0A5A7T993 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001470 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-08 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Lag0028619 vs. ExPASy TrEMBL
Match: A0A6J1DWE9 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia OX=3673 GN=LOC111024115 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-07 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Lag0028619 vs. ExPASy TrEMBL
Match: A0A6J1DX46 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 OS=Momordica charantia OX=3673 GN=LOC111025268 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-07 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Lag0028619 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-07 Identity = 29/58 (50.00%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Lag0028619 vs. ExPASy TrEMBL
Match: A0A6J0LKD5 (uncharacterized protein LOC108831416 OS=Raphanus sativus OX=3726 GN=LOC108831416 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-07 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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