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Lag0028605 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATTGAAAATCTCCCATCTCCTTTTTACCATGCTTTGGATCTCTCTTCTTTTGTTATTACTTCATGAACTAAACATCTTCAAAGCCAAAATGAACCACAAATTACCACCAACAAACGTCACATTTTCCTATTCTTCCTCCTCCAACCATCCCTTGATATCAAGGAAAGTACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCGCGGCCGAATCGATCACGAAAGCATTCGCCACCCGCCGCTCACGTCGAACCACCCGACGCTGCTGCAACCGACATCGATTCTCGCTATGGCGTCGAGAAGCGACGAGTCCCTACGGGTCCAAACCCATTGCACCATTGA ATGACATTGAAAATCTCCCATCTCCTTTTTACCATGCTTTGGATCTCTCTTCTTTTGTTATTACTTCATGAACTAAACATCTTCAAAGCCAAAATGAACCACAAATTACCACCAACAAACGTCACATTTTCCTATTCTTCCTCCTCCAACCATCCCTTGATATCAAGGAAAGTACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCGCGGCCGAATCGATCACGAAAGCATTCGCCACCCGCCGCTCACGTCGAACCACCCGACGCTGCTGCAACCGACATCGATTCTCGCTATGGCGTCGAGAAGCGACGAGTCCCTACGGGTCCAAACCCATTGCACCATTGA ATGACATTGAAAATCTCCCATCTCCTTTTTACCATGCTTTGGATCTCTCTTCTTTTGTTATTACTTCATGAACTAAACATCTTCAAAGCCAAAATGAACCACAAATTACCACCAACAAACGTCACATTTTCCTATTCTTCCTCCTCCAACCATCCCTTGATATCAAGGAAAGTACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCGCGGCCGAATCGATCACGAAAGCATTCGCCACCCGCCGCTCACGTCGAACCACCCGACGCTGCTGCAACCGACATCGATTCTCGCTATGGCGTCGAGAAGCGACGAGTCCCTACGGGTCCAAACCCATTGCACCATTGA MTLKISHLLFTMLWISLLLLLLHELNIFKAKMNHKLPPTNVTFSYSSSSNHPLISRKVLASKVDFTPFFPRPNRSRKHSPPAAHVEPPDAAATDIDSRYGVEKRRVPTGPNPLHH Homology
BLAST of Lag0028605 vs. NCBI nr
Match: KAG6601759.1 (CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33 Identity = 80/106 (75.47%), Postives = 89/106 (83.96%), Query Frame = 0
BLAST of Lag0028605 vs. NCBI nr
Match: KAG7032483.1 (CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of Lag0028605 vs. NCBI nr
Match: XP_022775823.1 (CLAVATA3/ESR (CLE)-related protein 12-like [Durio zibethinus]) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20 Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 0
BLAST of Lag0028605 vs. NCBI nr
Match: XP_027365548.1 (CLAVATA3/ESR (CLE)-related protein 12 [Abrus precatorius]) HSP 1 Score: 105.9 bits (263), Expect = 2.3e-19 Identity = 65/118 (55.08%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of Lag0028605 vs. NCBI nr
Match: KAF9677306.1 (hypothetical protein SADUNF_Sadunf08G0094200 [Salix dunnii]) HSP 1 Score: 105.1 bits (261), Expect = 4.0e-19 Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Lag0028605 vs. ExPASy Swiss-Prot
Match: Q29PU4 (CLAVATA3/ESR (CLE)-related protein 12 OS=Arabidopsis thaliana OX=3702 GN=CLE12 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15 Identity = 49/115 (42.61%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of Lag0028605 vs. ExPASy Swiss-Prot
Match: Q6NMF0 (CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana OX=3702 GN=CLE13 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Lag0028605 vs. ExPASy Swiss-Prot
Match: A2X462 (Protein FON2 SPARE1 OS=Oryza sativa subsp. indica OX=39946 GN=FOS1 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04 Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of Lag0028605 vs. ExPASy Swiss-Prot
Match: Q6Z6T2 (Inactive protein FON2 SPARE1 OS=Oryza sativa subsp. japonica OX=39947 GN=FOS1 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04 Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of Lag0028605 vs. ExPASy Swiss-Prot
Match: Q4PSX1 (CLAVATA3/ESR (CLE)-related protein 10 OS=Arabidopsis thaliana OX=3702 GN=CLE10 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.4e-04 Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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